RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 PSME1Q06323 249 aa22.45■■□□□ 1.18
SFXN1-208ENST00000507823 CHMP4BQ9H444 224 aaKnown RBP22.45■■□□□ 1.18
SFXN1-208ENST00000507823 PDZRN3Q9UPQ7 1066 aa22.44■■□□□ 1.18
SFXN1-208ENST00000507823 C1orf167Q5SNV9 1468 aa22.44■■□□□ 1.18
SFXN1-208ENST00000507823 NOP58Q9Y2X3 529 aaKnown RBP22.44■■□□□ 1.18
SFXN1-208ENST00000507823 API5Q9BZZ5 524 aaKnown RBP22.43■■□□□ 1.18
SFXN1-208ENST00000507823 DCCP43146 1447 aa22.43■■□□□ 1.18
SFXN1-208ENST00000507823 SMC5Q8IY18 1101 aa22.43■■□□□ 1.18
SFXN1-208ENST00000507823 ZBTB7BO15156 539 aaPredicted RBP22.42■■□□□ 1.18
SFXN1-208ENST00000507823 FOXO3O43524 673 aa22.42■■□□□ 1.18
SFXN1-208ENST00000507823 NCAPD2Q15021 1401 aa22.42■■□□□ 1.18
SFXN1-208ENST00000507823 USP19O94966 1318 aa22.42■■□□□ 1.18
SFXN1-208ENST00000507823 STRCP1A6NGW2 1772 aa22.41■■□□□ 1.18
SFXN1-208ENST00000507823 ELL2O00472 640 aaPredicted RBP22.41■■□□□ 1.18
SFXN1-208ENST00000507823 PROSER2Q86WR7 435 aaPredicted RBP22.41■■□□□ 1.18
SFXN1-208ENST00000507823 ORAI2Q96SN7 254 aa22.41■■□□□ 1.18
SFXN1-208ENST00000507823 C19orf44Q9H6X5 657 aa22.41■■□□□ 1.18
SFXN1-208ENST00000507823 RTF1Q92541 710 aaKnown RBP22.41■■□□□ 1.18
SFXN1-208ENST00000507823 MSH6P52701 1360 aa22.4■■□□□ 1.18
SFXN1-208ENST00000507823 C14orf37Q86TY3 774 aa22.4■■□□□ 1.18
SFXN1-208ENST00000507823 RGS12O14924 1447 aa22.39■■□□□ 1.18
SFXN1-208ENST00000507823 BABAM1Q9NWV8 329 aa22.39■■□□□ 1.18
SFXN1-208ENST00000507823 ALS2Q96Q42 1657 aa22.39■■□□□ 1.17
SFXN1-208ENST00000507823 CAMTA1Q9Y6Y1 1673 aa22.38■■□□□ 1.17
SFXN1-208ENST00000507823 MAP3K5Q99683 1374 aa22.38■■□□□ 1.17
SFXN1-208ENST00000507823 GNAT3A8MTJ3 354 aa22.37■■□□□ 1.17
SFXN1-208ENST00000507823 ARHGEF25Q86VW2 580 aa22.36■■□□□ 1.17
SFXN1-208ENST00000507823 MED1Q15648 1581 aaPredicted RBP22.36■■□□□ 1.17
SFXN1-208ENST00000507823 SOS1Q07889 1333 aaPredicted RBP22.36■■□□□ 1.17
SFXN1-208ENST00000507823 KRT24Q2M2I5 525 aa22.35■■□□□ 1.17
SFXN1-208ENST00000507823 INTS3Q68E01 1043 aaKnown RBP22.35■■□□□ 1.17
SFXN1-208ENST00000507823 PTPRCP08575 1304 aa22.35■■□□□ 1.17
SFXN1-208ENST00000507823 ERICH6Q7L0X2 663 aa22.34■■□□□ 1.17
SFXN1-208ENST00000507823 NPM2Q86SE8 214 aaKnown RBP22.34■■□□□ 1.17
SFXN1-208ENST00000507823 ZBTB47Q9UFB7 747 aaPredicted RBP22.34■■□□□ 1.17
SFXN1-208ENST00000507823 GCP02774 474 aa22.33■■□□□ 1.17
SFXN1-208ENST00000507823 TSPYL4Q9UJ04 414 aa22.33■■□□□ 1.17
SFXN1-208ENST00000507823 RGPD2P0DJD1 1756 aa22.33■■□□□ 1.17
SFXN1-208ENST00000507823 CEMIPQ8WUJ3 1361 aa22.33■■□□□ 1.16
SFXN1-208ENST00000507823 LMO7Q8WWI1 1683 aa22.32■■□□□ 1.16
SFXN1-208ENST00000507823 DDRGK1Q96HY6 314 aa22.32■■□□□ 1.16
SFXN1-208ENST00000507823 TMEM94Q12767 1356 aa22.32■■□□□ 1.16
SFXN1-208ENST00000507823 KRT28Q7Z3Y7 464 aa22.32■■□□□ 1.16
SFXN1-208ENST00000507823 NBPF6Q5VWK0 638 aa22.31■■□□□ 1.16
SFXN1-208ENST00000507823 IL17REQ8NFR9 667 aa22.31■■□□□ 1.16
SFXN1-208ENST00000507823 NBPF4Q96M43 638 aa22.31■■□□□ 1.16
SFXN1-208ENST00000507823 CACNA1FO60840 1977 aa22.31■■□□□ 1.16
SFXN1-208ENST00000507823 MYT1Q01538 1121 aa22.31■■□□□ 1.16
SFXN1-208ENST00000507823 LMTK3Q96Q04 1460 aa22.31■■□□□ 1.16
SFXN1-208ENST00000507823 LTV1Q96GA3 475 aaPredicted RBP22.3■■□□□ 1.16
SFXN1-208ENST00000507823 FAM208AQ9UK61 1670 aaKnown RBP22.3■■□□□ 1.16
SFXN1-208ENST00000507823 NUCB1Q02818 461 aa22.3■■□□□ 1.16
SFXN1-208ENST00000507823 GCC1Q96CN9 775 aa22.28■■□□□ 1.16
SFXN1-208ENST00000507823 MIS18AQ9NYP9 233 aa22.28■■□□□ 1.16
SFXN1-208ENST00000507823 TAF7Q15545 349 aaPredicted RBP22.27■■□□□ 1.16
SFXN1-208ENST00000507823 SIRT2Q8IXJ6 389 aa22.27■■□□□ 1.15
SFXN1-208ENST00000507823 USHBP1Q8N6Y0 703 aa22.26■■□□□ 1.15
SFXN1-208ENST00000507823 OVOS2A0A0G2JMS6 1433 aa22.26■■□□□ 1.15
SFXN1-208ENST00000507823 KDM3BQ7LBC6 1761 aa22.26■■□□□ 1.15
SFXN1-208ENST00000507823 XPCQ01831 940 aaPredicted RBP22.26■■□□□ 1.15
SFXN1-208ENST00000507823 ATF3P18847 181 aa22.25■■□□□ 1.15
SFXN1-208ENST00000507823 N4BP2Q86UW6 1770 aaPredicted RBP22.25■■□□□ 1.15
SFXN1-208ENST00000507823 XIRP1Q702N8 1843 aaKnown RBP22.25■■□□□ 1.15
SFXN1-208ENST00000507823 ABCC6O95255 1503 aa22.25■■□□□ 1.15
SFXN1-208ENST00000507823 ATP10DQ9P241 1426 aa22.24■■□□□ 1.15
SFXN1-208ENST00000507823 SLC4A2P04920 1241 aa22.24■■□□□ 1.15
SFXN1-208ENST00000507823 ADAMTS7Q9UKP4 1686 aa22.23■■□□□ 1.15
SFXN1-208ENST00000507823 CRYBG1Q9Y4K1 1723 aa22.22■■□□□ 1.15
SFXN1-208ENST00000507823 AMOTQ4VCS5 1084 aa22.22■■□□□ 1.15
SFXN1-208ENST00000507823 CADPS2Q86UW7 1296 aa22.22■■□□□ 1.15
SFXN1-208ENST00000507823 CHD1LQ86WJ1 897 aa22.22■■□□□ 1.15
SFXN1-208ENST00000507823 COL18A1P39060 1754 aa22.22■■□□□ 1.15
SFXN1-208ENST00000507823 RGPD5Q99666 1765 aa22.21■■□□□ 1.15
SFXN1-208ENST00000507823 SEC24BO95487 1268 aa22.21■■□□□ 1.15
SFXN1-208ENST00000507823 AKAP4Q5JQC9 854 aa22.21■■□□□ 1.15
SFXN1-208ENST00000507823 ANKRD24Q8TF21 1146 aa22.21■■□□□ 1.15
SFXN1-208ENST00000507823 C1orf115Q9H7X2 142 aa22.21■■□□□ 1.15
SFXN1-208ENST00000507823 PLEKHO1Q53GL0 409 aaPredicted RBP22.2■■□□□ 1.14
SFXN1-208ENST00000507823 CCDC30Q5VVM6 783 aa22.2■■□□□ 1.14
SFXN1-208ENST00000507823 LRRC59Q96AG4 307 aaKnown RBP22.2■■□□□ 1.14
SFXN1-208ENST00000507823 PXDNQ92626 1479 aa22.2■■□□□ 1.14
SFXN1-208ENST00000507823 STRCQ7RTU9 1775 aa22.2■■□□□ 1.14
SFXN1-208ENST00000507823 PLEKHG2Q9H7P9 1386 aa22.2■■□□□ 1.14
SFXN1-208ENST00000507823 ANKRD44Q8N8A2 993 aa22.19■■□□□ 1.14
SFXN1-208ENST00000507823 G2E3Q7L622 706 aa22.18■■□□□ 1.14
SFXN1-208ENST00000507823 AXIN2Q9Y2T1 843 aa22.18■■□□□ 1.14
SFXN1-208ENST00000507823 NPHP3Q7Z494 1330 aa22.18■■□□□ 1.14
SFXN1-208ENST00000507823 TNS3Q68CZ2 1445 aa22.18■■□□□ 1.14
SFXN1-208ENST00000507823 HOXB7P09629 217 aa22.18■■□□□ 1.14
SFXN1-208ENST00000507823 CCT4P50991 539 aaKnown RBP22.18■■□□□ 1.14
SFXN1-208ENST00000507823 RPAP2Q8IXW5 612 aaPredicted RBP22.18■■□□□ 1.14
SFXN1-208ENST00000507823 PXDNLA1KZ92 1463 aa22.18■■□□□ 1.14
SFXN1-208ENST00000507823 STK31Q9BXU1 1019 aa22.17■■□□□ 1.14
SFXN1-208ENST00000507823 ERBB3P21860 1342 aa22.17■■□□□ 1.14
SFXN1-208ENST00000507823 DCTPP1Q9H773 170 aa22.17■■□□□ 1.14
SFXN1-208ENST00000507823 SIPA1L3O60292 1781 aaPredicted RBP22.17■■□□□ 1.14
SFXN1-208ENST00000507823 HSPA2P54652 639 aa22.15■■□□□ 1.14
SFXN1-208ENST00000507823 LMOD2Q6P5Q4 547 aa22.15■■□□□ 1.14
SFXN1-208ENST00000507823 LNPKQ9C0E8 428 aa22.15■■□□□ 1.14
SFXN1-208ENST00000507823 ZNF530Q6P9A1 599 aaPredicted RBP22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms