RNA–Protein interactions for RNA: ENST00000506334.1

ARHGEF28-207, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-207ENST00000506334 SLIT3O75094 1523 aa11.33□□□□□ -0.6
ARHGEF28-207ENST00000506334 COL18A1P39060 1754 aa11.32□□□□□ -0.6
ARHGEF28-207ENST00000506334 TTC21BQ7Z4L5 1316 aa11.32□□□□□ -0.6
ARHGEF28-207ENST00000506334 CEP350Q5VT06 3117 aa11.31□□□□□ -0.6
ARHGEF28-207ENST00000506334 GRIN3BO60391 1043 aa11.31□□□□□ -0.6
ARHGEF28-207ENST00000506334 ZNF827Q17R98 1081 aa11.31□□□□□ -0.6
ARHGEF28-207ENST00000506334 SLC27A3Q5K4L6 730 aa11.31□□□□□ -0.6
ARHGEF28-207ENST00000506334 LRRC4BQ9NT99 713 aa11.31□□□□□ -0.6
ARHGEF28-207ENST00000506334 CPSF1Q10570 1443 aaKnown RBP11.31□□□□□ -0.6
ARHGEF28-207ENST00000506334 TTC21AQ8NDW8 1320 aa11.31□□□□□ -0.6
ARHGEF28-207ENST00000506334 IL2RBP14784 551 aa11.3□□□□□ -0.6
ARHGEF28-207ENST00000506334 PELP1Q8IZL8 1130 aaKnown RBP11.3□□□□□ -0.6
ARHGEF28-207ENST00000506334 EVC2Q86UK5 1308 aa11.3□□□□□ -0.6
ARHGEF28-207ENST00000506334 SOX12O15370 315 aa11.29□□□□□ -0.6
ARHGEF28-207ENST00000506334 PHF12Q96QT6 1004 aa11.29□□□□□ -0.6
ARHGEF28-207ENST00000506334 NLRP2Q9NX02 1062 aa11.29□□□□□ -0.6
ARHGEF28-207ENST00000506334 AKAP12Q02952 1782 aa11.28□□□□□ -0.6
ARHGEF28-207ENST00000506334 KLHL34Q8N239 644 aa11.28□□□□□ -0.6
ARHGEF28-207ENST00000506334 TFCP2L1Q9NZI6 479 aa11.27□□□□□ -0.61
ARHGEF28-207ENST00000506334 TNS2Q63HR2 1409 aa11.26□□□□□ -0.61
ARHGEF28-207ENST00000506334 KIAA1210Q9ULL0 1709 aa11.26□□□□□ -0.61
ARHGEF28-207ENST00000506334 GOLGB1Q14789 3259 aaKnown RBP11.26□□□□□ -0.61
ARHGEF28-207ENST00000506334 MNX1P50219 401 aaPredicted RBP11.26□□□□□ -0.61
ARHGEF28-207ENST00000506334 PNPLA7Q6ZV29 1317 aa11.26□□□□□ -0.61
ARHGEF28-207ENST00000506334 KAT6BQ8WYB5 2073 aa11.25□□□□□ -0.61
ARHGEF28-207ENST00000506334 NLGN2Q8NFZ4 835 aa11.25□□□□□ -0.61
ARHGEF28-207ENST00000506334 ERBB3P21860 1342 aa11.25□□□□□ -0.61
ARHGEF28-207ENST00000506334 RGPD5Q99666 1765 aa11.24□□□□□ -0.61
ARHGEF28-207ENST00000506334 WNK3Q9BYP7 1800 aa11.24□□□□□ -0.61
ARHGEF28-207ENST00000506334 YBX3P16989 372 aaKnown RBP eCLIP11.24□□□□□ -0.61
ARHGEF28-207ENST00000506334 ANKRD24Q8TF21 1146 aa11.24□□□□□ -0.61
ARHGEF28-207ENST00000506334 TRPM1Q7Z4N2 1603 aa11.24□□□□□ -0.61
ARHGEF28-207ENST00000506334 PIK3C2AO00443 1686 aa11.24□□□□□ -0.61
ARHGEF28-207ENST00000506334 NHSQ6T4R5 1651 aa11.24□□□□□ -0.61
ARHGEF28-207ENST00000506334 HMGB2P26583 209 aaKnown RBP11.23□□□□□ -0.61
ARHGEF28-207ENST00000506334 DDX54Q8TDD1 881 aaKnown RBP11.23□□□□□ -0.61
ARHGEF28-207ENST00000506334 GPBP1L1Q9HC44 474 aaPredicted RBP11.23□□□□□ -0.61
ARHGEF28-207ENST00000506334 USP31Q70CQ4 1352 aa11.23□□□□□ -0.61
ARHGEF28-207ENST00000506334 KTN1Q86UP2 1357 aaKnown RBP11.23□□□□□ -0.61
ARHGEF28-207ENST00000506334 PAPPAQ13219 1627 aa11.23□□□□□ -0.61
ARHGEF28-207ENST00000506334 ABCC6O95255 1503 aa11.22□□□□□ -0.61
ARHGEF28-207ENST00000506334 HSPA6P17066 643 aa11.22□□□□□ -0.61
ARHGEF28-207ENST00000506334 PRIM1P49642 420 aaKnown RBP11.22□□□□□ -0.61
ARHGEF28-207ENST00000506334 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.21□□□□□ -0.618e-7■■■□□ 18
ARHGEF28-207ENST00000506334 CD2APQ9Y5K6 639 aa11.21□□□□□ -0.61
ARHGEF28-207ENST00000506334 NFAT5O94916 1531 aa11.2□□□□□ -0.62
ARHGEF28-207ENST00000506334 KCNQ4P56696 695 aa11.2□□□□□ -0.62
ARHGEF28-207ENST00000506334 COL23A1Q86Y22 540 aaPredicted RBP11.2□□□□□ -0.62
ARHGEF28-207ENST00000506334 IP6K1Q92551 441 aa11.2□□□□□ -0.62
ARHGEF28-207ENST00000506334 SYTL4Q96C24 671 aaPredicted RBP11.2□□□□□ -0.62
ARHGEF28-207ENST00000506334 BTAF1O14981 1849 aa11.2□□□□□ -0.62
ARHGEF28-207ENST00000506334 COL24A1Q17RW2 1714 aa11.2□□□□□ -0.62
ARHGEF28-207ENST00000506334 SHANK3Q9BYB0 1731 aa11.2□□□□□ -0.62
ARHGEF28-207ENST00000506334 NME9Q86XW9 330 aa11.19□□□□□ -0.62
ARHGEF28-207ENST00000506334 FLAD1Q8NFF5 587 aa11.19□□□□□ -0.62
ARHGEF28-207ENST00000506334 CCNL1Q9UK58 526 aaPredicted RBP11.19□□□□□ -0.62
ARHGEF28-207ENST00000506334 ATP10DQ9P241 1426 aa11.18□□□□□ -0.62
ARHGEF28-207ENST00000506334 QRICH2Q9H0J4 1663 aa11.18□□□□□ -0.62
ARHGEF28-207ENST00000506334 ZCRB1Q8TBF4 217 aaKnown RBP11.18□□□□□ -0.62
ARHGEF28-207ENST00000506334 L3MBTL2Q969R5 705 aa11.18□□□□□ -0.62
ARHGEF28-207ENST00000506334 QSER1Q2KHR3 1735 aa11.18□□□□□ -0.62
ARHGEF28-207ENST00000506334 ANKRD36BQ8N2N9 1353 aa11.17□□□□□ -0.62
ARHGEF28-207ENST00000506334 HDGFL2Q7Z4V5 671 aaPredicted RBP11.17□□□□□ -0.62
ARHGEF28-207ENST00000506334 TMC1Q8TDI8 760 aa11.15□□□□□ -0.62
ARHGEF28-207ENST00000506334 LTV1Q96GA3 475 aaPredicted RBP11.15□□□□□ -0.62
ARHGEF28-207ENST00000506334 SBNO2Q9Y2G9 1366 aa11.15□□□□□ -0.63
ARHGEF28-207ENST00000506334 MSL1Q68DK7 614 aa11.14□□□□□ -0.63
ARHGEF28-207ENST00000506334 ZNF526Q8TF50 670 aaPredicted RBP11.14□□□□□ -0.63
ARHGEF28-207ENST00000506334 OTUD5Q96G74 571 aa11.14□□□□□ -0.63
ARHGEF28-207ENST00000506334 MS4A3Q96HJ5 214 aa11.14□□□□□ -0.63
ARHGEF28-207ENST00000506334 SLC12A5Q9H2X9 1139 aa11.14□□□□□ -0.63
ARHGEF28-207ENST00000506334 TERF2IPQ9NYB0 399 aa11.14□□□□□ -0.63
ARHGEF28-207ENST00000506334 ADCY9O60503 1353 aa11.14□□□□□ -0.63
ARHGEF28-207ENST00000506334 USP47Q96K76 1375 aa11.14□□□□□ -0.63
ARHGEF28-207ENST00000506334 APLP1P51693 650 aa11.13□□□□□ -0.63
ARHGEF28-207ENST00000506334 PUS7Q96PZ0 661 aaKnown RBP11.13□□□□□ -0.63
ARHGEF28-207ENST00000506334 ROCK2O75116 1388 aaKnown RBP11.13□□□□□ -0.63
ARHGEF28-207ENST00000506334 NSD2O96028 1365 aa11.13□□□□□ -0.63
ARHGEF28-207ENST00000506334 CGNL1Q0VF96 1302 aa11.12□□□□□ -0.63
ARHGEF28-207ENST00000506334 KIF3CO14782 793 aa11.12□□□□□ -0.63
ARHGEF28-207ENST00000506334 DNAJC5GQ8N7S2 189 aa11.12□□□□□ -0.63
ARHGEF28-207ENST00000506334 POTEB2H3BUK9 544 aa11.11□□□□□ -0.63
ARHGEF28-207ENST00000506334 HOXC9P31274 260 aa11.11□□□□□ -0.63
ARHGEF28-207ENST00000506334 AMPHP49418 695 aa11.11□□□□□ -0.63
ARHGEF28-207ENST00000506334 ASTLQ6HA08 431 aaPredicted RBP11.11□□□□□ -0.63
ARHGEF28-207ENST00000506334 TSPYL2Q9H2G4 693 aaPredicted RBP11.11□□□□□ -0.63
ARHGEF28-207ENST00000506334 EDC4Q6P2E9 1401 aaKnown RBP11.1□□□□□ -0.63
ARHGEF28-207ENST00000506334 LY75O60449 1722 aa11.1□□□□□ -0.63
ARHGEF28-207ENST00000506334 TOMM70O94826 608 aa11.1□□□□□ -0.63
ARHGEF28-207ENST00000506334 SLC39A7Q92504 469 aa11.1□□□□□ -0.63
ARHGEF28-207ENST00000506334 CD163L1Q9NR16 1453 aa11.1□□□□□ -0.63
ARHGEF28-207ENST00000506334 IGSF1Q8N6C5 1336 aa11.09□□□□□ -0.63
ARHGEF28-207ENST00000506334 USP54Q70EL1 1684 aa11.09□□□□□ -0.63
ARHGEF28-207ENST00000506334 NBPF6Q5VWK0 638 aa11.09□□□□□ -0.63
ARHGEF28-207ENST00000506334 SMARCC1Q92922 1105 aaPredicted RBP11.09□□□□□ -0.63
ARHGEF28-207ENST00000506334 COG3Q96JB2 828 aa11.09□□□□□ -0.63
ARHGEF28-207ENST00000506334 NBPF4Q96M43 638 aa11.09□□□□□ -0.63
ARHGEF28-207ENST00000506334 TUBGCP6Q96RT7 1819 aa11.09□□□□□ -0.63
ARHGEF28-207ENST00000506334 MAP3K19Q56UN5 1328 aa11.09□□□□□ -0.63
ARHGEF28-207ENST00000506334 LTN1O94822 1766 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms