RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 TTC21BQ7Z4L5 1316 aa13.26□□□□□ -0.29
PTPN20-216ENST00000506080 RGPD5Q99666 1765 aa13.26□□□□□ -0.29
PTPN20-216ENST00000506080 ACSBG1Q96GR2 724 aa13.25□□□□□ -0.29
PTPN20-216ENST00000506080 MS4A3Q96HJ5 214 aa13.25□□□□□ -0.29
PTPN20-216ENST00000506080 EVC2Q86UK5 1308 aa13.25□□□□□ -0.29
PTPN20-216ENST00000506080 MTFR1LQ9H019 292 aa13.24□□□□□ -0.29
PTPN20-216ENST00000506080 SGIP1Q9BQI5 828 aa13.23□□□□□ -0.29
PTPN20-216ENST00000506080 TNS2Q63HR2 1409 aa13.23□□□□□ -0.29
PTPN20-216ENST00000506080 CCDC7Q96M83 1385 aa13.22□□□□□ -0.29
PTPN20-216ENST00000506080 SENP3-EIF4A1A0A087X0R7 540 aa13.22□□□□□ -0.29
PTPN20-216ENST00000506080 TTC21AQ8NDW8 1320 aa13.22□□□□□ -0.29
PTPN20-216ENST00000506080 ARXQ96QS3 562 aa13.22□□□□□ -0.29
PTPN20-216ENST00000506080 TRPM1Q7Z4N2 1603 aa13.21□□□□□ -0.3
PTPN20-216ENST00000506080 NFAT5O94916 1531 aa13.2□□□□□ -0.3
PTPN20-216ENST00000506080 KTN1Q86UP2 1357 aaKnown RBP13.2□□□□□ -0.3
PTPN20-216ENST00000506080 NLRP2Q9NX02 1062 aa13.2□□□□□ -0.3
PTPN20-216ENST00000506080 UTRNP46939 3433 aa13.19□□□□□ -0.3
PTPN20-216ENST00000506080 NHSQ6T4R5 1651 aa13.19□□□□□ -0.3
PTPN20-216ENST00000506080 C1QTNF8P60827 252 aa13.19□□□□□ -0.3
PTPN20-216ENST00000506080 ZNF827Q17R98 1081 aa13.19□□□□□ -0.3
PTPN20-216ENST00000506080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.19□□□□□ -0.3
PTPN20-216ENST00000506080 L3MBTL2Q969R5 705 aa13.19□□□□□ -0.3
PTPN20-216ENST00000506080 KIF12Q96FN5 646 aa13.19□□□□□ -0.3
PTPN20-216ENST00000506080 NUBP1P53384 320 aa13.18□□□□□ -0.3
PTPN20-216ENST00000506080 GPR162Q16538 588 aa13.18□□□□□ -0.3
PTPN20-216ENST00000506080 KLHL34Q8N239 644 aa13.18□□□□□ -0.3
PTPN20-216ENST00000506080 FBXO3Q9UK99 471 aa13.18□□□□□ -0.3
PTPN20-216ENST00000506080 CHD4Q14839 1912 aa13.17□□□□□ -0.3
PTPN20-216ENST00000506080 ABCC6O95255 1503 aa13.17□□□□□ -0.3
PTPN20-216ENST00000506080 ERBB3P21860 1342 aa13.17□□□□□ -0.3
PTPN20-216ENST00000506080 IL2RBP14784 551 aa13.17□□□□□ -0.3
PTPN20-216ENST00000506080 LRRC4BQ9NT99 713 aa13.17□□□□□ -0.3
PTPN20-216ENST00000506080 ZBTB47Q9UFB7 747 aaPredicted RBP13.17□□□□□ -0.3
PTPN20-216ENST00000506080 PAPPAQ13219 1627 aa13.17□□□□□ -0.3
PTPN20-216ENST00000506080 PELP1Q8IZL8 1130 aaKnown RBP13.16□□□□□ -0.3
PTPN20-216ENST00000506080 ROCK2O75116 1388 aaKnown RBP13.16□□□□□ -0.3
PTPN20-216ENST00000506080 NME9Q86XW9 330 aa13.15□□□□□ -0.3
PTPN20-216ENST00000506080 ANKRD24Q8TF21 1146 aa13.15□□□□□ -0.3
PTPN20-216ENST00000506080 BTAF1O14981 1849 aa13.15□□□□□ -0.3
PTPN20-216ENST00000506080 MAP3K5Q99683 1374 aa13.15□□□□□ -0.3
PTPN20-216ENST00000506080 KAT6BQ8WYB5 2073 aa13.15□□□□□ -0.31
PTPN20-216ENST00000506080 SIN3AQ96ST3 1273 aa13.13□□□□□ -0.31
PTPN20-216ENST00000506080 USP31Q70CQ4 1352 aa13.13□□□□□ -0.31
PTPN20-216ENST00000506080 MON2Q7Z3U7 1717 aa13.13□□□□□ -0.31
PTPN20-216ENST00000506080 MAP3K13O43283 966 aa13.13□□□□□ -0.31
PTPN20-216ENST00000506080 POLD1P28340 1107 aa13.13□□□□□ -0.31
PTPN20-216ENST00000506080 KCNQ4P56696 695 aa13.13□□□□□ -0.31
PTPN20-216ENST00000506080 DDX54Q8TDD1 881 aaKnown RBP13.13□□□□□ -0.31
PTPN20-216ENST00000506080 LTN1O94822 1766 aa13.12□□□□□ -0.31
PTPN20-216ENST00000506080 GIGYF1O75420 1035 aaPredicted RBP13.12□□□□□ -0.31
PTPN20-216ENST00000506080 NEUROD1Q13562 356 aa13.12□□□□□ -0.31
PTPN20-216ENST00000506080 TMC1Q8TDI8 760 aa13.12□□□□□ -0.31
PTPN20-216ENST00000506080 PNPLA7Q6ZV29 1317 aa13.11□□□□□ -0.31
PTPN20-216ENST00000506080 SBNO2Q9Y2G9 1366 aa13.11□□□□□ -0.31
PTPN20-216ENST00000506080 SLC16A10Q8TF71 515 aa13.11□□□□□ -0.31
PTPN20-216ENST00000506080 SYTL4Q96C24 671 aaPredicted RBP13.11□□□□□ -0.31
PTPN20-216ENST00000506080 LTV1Q96GA3 475 aaPredicted RBP13.11□□□□□ -0.31
PTPN20-216ENST00000506080 TFCP2L1Q9NZI6 479 aa13.11□□□□□ -0.31
PTPN20-216ENST00000506080 ATMINO43313 823 aaPredicted RBP13.1□□□□□ -0.31
PTPN20-216ENST00000506080 SLC27A3Q5K4L6 730 aa13.1□□□□□ -0.31
PTPN20-216ENST00000506080 ASTLQ6HA08 431 aaPredicted RBP13.1□□□□□ -0.31
PTPN20-216ENST00000506080 NLGN2Q8NFZ4 835 aa13.1□□□□□ -0.31
PTPN20-216ENST00000506080 CD163L1Q9NR16 1453 aa13.09□□□□□ -0.31
PTPN20-216ENST00000506080 USP54Q70EL1 1684 aa13.09□□□□□ -0.31
PTPN20-216ENST00000506080 HDGFL2Q7Z4V5 671 aaPredicted RBP13.09□□□□□ -0.31
PTPN20-216ENST00000506080 SLC12A5Q9H2X9 1139 aa13.09□□□□□ -0.31
PTPN20-216ENST00000506080 TRPC6Q9Y210 931 aa13.09□□□□□ -0.31
PTPN20-216ENST00000506080 PRIM1P49642 420 aaKnown RBP13.07□□□□□ -0.32
PTPN20-216ENST00000506080 IP6K1Q92551 441 aa13.07□□□□□ -0.32
PTPN20-216ENST00000506080 QSER1Q2KHR3 1735 aa13.07□□□□□ -0.32
PTPN20-216ENST00000506080 EDC4Q6P2E9 1401 aaKnown RBP13.07□□□□□ -0.32
PTPN20-216ENST00000506080 TUBGCP6Q96RT7 1819 aa13.06□□□□□ -0.32
PTPN20-216ENST00000506080 VASPP50552 380 aaPredicted RBP13.06□□□□□ -0.32
PTPN20-216ENST00000506080 YBX3P16989 372 aaKnown RBP eCLIP13.05□□□□□ -0.32
PTPN20-216ENST00000506080 ANKRD36BQ8N2N9 1353 aa13.05□□□□□ -0.32
PTPN20-216ENST00000506080 COL24A1Q17RW2 1714 aa13.05□□□□□ -0.32
PTPN20-216ENST00000506080 SHANK3Q9BYB0 1731 aa13.05□□□□□ -0.32
PTPN20-216ENST00000506080 POTEB2H3BUK9 544 aa13.05□□□□□ -0.32
PTPN20-216ENST00000506080 FAM212AQ96EL1 285 aa13.05□□□□□ -0.32
PTPN20-216ENST00000506080 CARD11Q9BXL7 1154 aa13.05□□□□□ -0.32
PTPN20-216ENST00000506080 TERF2IPQ9NYB0 399 aa13.05□□□□□ -0.32
PTPN20-216ENST00000506080 CCNL1Q9UK58 526 aaPredicted RBP13.05□□□□□ -0.32
PTPN20-216ENST00000506080 A0A1W2PP64 1363 aa13.04□□□□□ -0.32
PTPN20-216ENST00000506080 NSD2O96028 1365 aa13.04□□□□□ -0.32
PTPN20-216ENST00000506080 DOT1LQ8TEK3 1739 aa13.04□□□□□ -0.32
PTPN20-216ENST00000506080 FBLN1P23142 703 aa13.04□□□□□ -0.32
PTPN20-216ENST00000506080 ATN1P54259 1190 aaPredicted RBP13.04□□□□□ -0.32
PTPN20-216ENST00000506080 MSL1Q68DK7 614 aa13.04□□□□□ -0.32
PTPN20-216ENST00000506080 GRIN3BO60391 1043 aa13.03□□□□□ -0.32
PTPN20-216ENST00000506080 IFFO2Q5TF58 517 aa13.03□□□□□ -0.32
PTPN20-216ENST00000506080 COL23A1Q86Y22 540 aaPredicted RBP13.03□□□□□ -0.32
PTPN20-216ENST00000506080 ZCRB1Q8TBF4 217 aaKnown RBP13.03□□□□□ -0.32
PTPN20-216ENST00000506080 HOXC9P31274 260 aa13.02□□□□□ -0.33
PTPN20-216ENST00000506080 AMPHP49418 695 aa13.02□□□□□ -0.33
PTPN20-216ENST00000506080 MAP3K19Q56UN5 1328 aa13.02□□□□□ -0.33
PTPN20-216ENST00000506080 GOLGB1Q14789 3259 aaKnown RBP13.02□□□□□ -0.33
PTPN20-216ENST00000506080 LY75O60449 1722 aa13.01□□□□□ -0.33
PTPN20-216ENST00000506080 COG3Q96JB2 828 aa13.01□□□□□ -0.33
PTPN20-216ENST00000506080 BMP2KQ9NSY1 1161 aaPredicted RBP13.01□□□□□ -0.33
PTPN20-216ENST00000506080 MEGF6O75095 1541 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms