RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 RAPGEF4Q8WZA2 1011 aa15.5■□□□□ 0.07
UBE2D3-219ENST00000505207 SMG6Q86US8 1419 aaKnown RBP15.5■□□□□ 0.07
UBE2D3-219ENST00000505207 FAM208AQ9UK61 1670 aaKnown RBP15.49■□□□□ 0.07
UBE2D3-219ENST00000505207 FYB1O15117 783 aa15.49■□□□□ 0.07
UBE2D3-219ENST00000505207 POLD1P28340 1107 aa15.49■□□□□ 0.07
UBE2D3-219ENST00000505207 LRRC4BQ9NT99 713 aa15.49■□□□□ 0.07
UBE2D3-219ENST00000505207 TFCP2L1Q9NZI6 479 aa15.49■□□□□ 0.07
UBE2D3-219ENST00000505207 SGIP1Q9BQI5 828 aa15.48■□□□□ 0.07
UBE2D3-219ENST00000505207 GGNBP2Q9H3C7 697 aa15.48■□□□□ 0.07
UBE2D3-219ENST00000505207 USP47Q96K76 1375 aa15.48■□□□□ 0.07
UBE2D3-219ENST00000505207 TATP17735 454 aaPredicted RBP15.47■□□□□ 0.07
UBE2D3-219ENST00000505207 ZNF827Q17R98 1081 aa15.47■□□□□ 0.07
UBE2D3-219ENST00000505207 AKT1S1Q96B36 256 aa15.47■□□□□ 0.07
UBE2D3-219ENST00000505207 BTAF1O14981 1849 aa15.46■□□□□ 0.07
UBE2D3-219ENST00000505207 FBLN1P23142 703 aa15.46■□□□□ 0.07
UBE2D3-219ENST00000505207 RRS1Q15050 365 aaKnown RBP15.46■□□□□ 0.07
UBE2D3-219ENST00000505207 TIMELESSQ9UNS1 1208 aa15.46■□□□□ 0.07
UBE2D3-219ENST00000505207 NBPF6Q5VWK0 638 aa15.45■□□□□ 0.06
UBE2D3-219ENST00000505207 NBPF4Q96M43 638 aa15.45■□□□□ 0.06
UBE2D3-219ENST00000505207 KIF24Q5T7B8 1368 aa15.45■□□□□ 0.06
UBE2D3-219ENST00000505207 MAP3K5Q99683 1374 aa15.45■□□□□ 0.06
UBE2D3-219ENST00000505207 CCNL1Q9UK58 526 aaPredicted RBP15.44■□□□□ 0.06
UBE2D3-219ENST00000505207 MYOM1P52179 1685 aa15.44■□□□□ 0.06
UBE2D3-219ENST00000505207 GPR162Q16538 588 aa15.43■□□□□ 0.06
UBE2D3-219ENST00000505207 INSRP06213 1382 aa15.43■□□□□ 0.06
UBE2D3-219ENST00000505207 FLT4P35916 1363 aa15.42■□□□□ 0.06
UBE2D3-219ENST00000505207 PAPPAQ13219 1627 aa15.42■□□□□ 0.06
UBE2D3-219ENST00000505207 PNPLA7Q6ZV29 1317 aa15.42■□□□□ 0.06
UBE2D3-219ENST00000505207 PCDH11XQ9BZA7 1347 aa15.42■□□□□ 0.06
UBE2D3-219ENST00000505207 PCDH11YQ9BZA8 1340 aa15.42■□□□□ 0.06
UBE2D3-219ENST00000505207 HSP90AB2PQ58FF8 381 aa15.41■□□□□ 0.06
UBE2D3-219ENST00000505207 KLHL34Q8N239 644 aa15.41■□□□□ 0.06
UBE2D3-219ENST00000505207 USHBP1Q8N6Y0 703 aa15.41■□□□□ 0.06
UBE2D3-219ENST00000505207 FLAD1Q8NFF5 587 aa15.41■□□□□ 0.06
UBE2D3-219ENST00000505207 MEGF6O75095 1541 aa15.4■□□□□ 0.06
UBE2D3-219ENST00000505207 KCNQ4P56696 695 aa15.4■□□□□ 0.06
UBE2D3-219ENST00000505207 ZNF784Q8NCA9 323 aaPredicted RBP15.39■□□□□ 0.05
UBE2D3-219ENST00000505207 SMARCC1Q92922 1105 aaPredicted RBP15.39■□□□□ 0.05
UBE2D3-219ENST00000505207 PPM1GO15355 546 aaPredicted RBP15.38■□□□□ 0.05
UBE2D3-219ENST00000505207 SPG7Q9UQ90 795 aa15.38■□□□□ 0.05
UBE2D3-219ENST00000505207 NSD2O96028 1365 aa15.37■□□□□ 0.05
UBE2D3-219ENST00000505207 MPRIPQ6WCQ1 1025 aa15.37■□□□□ 0.05
UBE2D3-219ENST00000505207 CARD14Q9BXL6 1004 aa15.37■□□□□ 0.05
UBE2D3-219ENST00000505207 CLSPNQ9HAW4 1339 aa15.37■□□□□ 0.05
UBE2D3-219ENST00000505207 PELP1Q8IZL8 1130 aaKnown RBP15.36■□□□□ 0.05
UBE2D3-219ENST00000505207 NSD3Q9BZ95 1437 aa15.35■□□□□ 0.05
UBE2D3-219ENST00000505207 QSER1Q2KHR3 1735 aa15.35■□□□□ 0.05
UBE2D3-219ENST00000505207 GRIN3BO60391 1043 aa15.35■□□□□ 0.05
UBE2D3-219ENST00000505207 DOT1LQ8TEK3 1739 aa15.34■□□□□ 0.05
UBE2D3-219ENST00000505207 CYP27B1O15528 508 aa15.34■□□□□ 0.05
UBE2D3-219ENST00000505207 NPM3O75607 178 aaKnown RBP15.34■□□□□ 0.05
UBE2D3-219ENST00000505207 COL23A1Q86Y22 540 aaPredicted RBP15.34■□□□□ 0.05
UBE2D3-219ENST00000505207 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.34■□□□□ 0.05
UBE2D3-219ENST00000505207 EMILIN1Q9Y6C2 1016 aa15.34■□□□□ 0.05
UBE2D3-219ENST00000505207 WASHC2AQ641Q2 1341 aa15.34■□□□□ 0.05
UBE2D3-219ENST00000505207 PALLDQ8WX93 1383 aa15.34■□□□□ 0.05
UBE2D3-219ENST00000505207 RGPD2P0DJD1 1756 aa15.34■□□□□ 0.05
UBE2D3-219ENST00000505207 AK7Q96M32 723 aa15.33■□□□□ 0.04
UBE2D3-219ENST00000505207 LY75O60449 1722 aa15.33■□□□□ 0.04
UBE2D3-219ENST00000505207 NKX1-1Q15270 411 aaPredicted RBP15.32■□□□□ 0.04
UBE2D3-219ENST00000505207 POLR3GLQ9BT43 218 aa15.32■□□□□ 0.04
UBE2D3-219ENST00000505207 RNF216Q9NWF9 866 aaPredicted RBP15.32■□□□□ 0.04
UBE2D3-219ENST00000505207 KIF20BQ96Q89 1820 aa15.31■□□□□ 0.04
UBE2D3-219ENST00000505207 CHD4Q14839 1912 aa15.31■□□□□ 0.04
UBE2D3-219ENST00000505207 IFNL2Q8IZJ0 200 aa15.3■□□□□ 0.04
UBE2D3-219ENST00000505207 SHANK3Q9BYB0 1731 aa15.3■□□□□ 0.04
UBE2D3-219ENST00000505207 PCGF6Q9BYE7 350 aa15.3■□□□□ 0.04
UBE2D3-219ENST00000505207 TMOD3Q9NYL9 352 aa15.3■□□□□ 0.04
UBE2D3-219ENST00000505207 CD2APQ9Y5K6 639 aa15.3■□□□□ 0.04
UBE2D3-219ENST00000505207 MSL1Q68DK7 614 aa15.29■□□□□ 0.04
UBE2D3-219ENST00000505207 NLGN2Q8NFZ4 835 aa15.29■□□□□ 0.04
UBE2D3-219ENST00000505207 PIGBQ92521 554 aa15.29■□□□□ 0.04
UBE2D3-219ENST00000505207 EYA1Q99502 592 aa15.29■□□□□ 0.04
UBE2D3-219ENST00000505207 POLKQ9UBT6 870 aa15.29■□□□□ 0.04
UBE2D3-219ENST00000505207 EIF4G2P78344 907 aaKnown RBP eCLIP15.28■□□□□ 0.04
UBE2D3-219ENST00000505207 COL24A1Q17RW2 1714 aa15.27■□□□□ 0.04
UBE2D3-219ENST00000505207 LOC102724428A0A0B4J2F2 783 aa15.27■□□□□ 0.04
UBE2D3-219ENST00000505207 SIK1P57059 783 aa15.27■□□□□ 0.04
UBE2D3-219ENST00000505207 C1QTNF8P60827 252 aa15.27■□□□□ 0.04
UBE2D3-219ENST00000505207 NCAPD2Q15021 1401 aa15.26■□□□□ 0.03
UBE2D3-219ENST00000505207 PLEKHG2Q9H7P9 1386 aa15.26■□□□□ 0.03
UBE2D3-219ENST00000505207 HSP90AB1P08238 724 aaKnown RBP15.26■□□□□ 0.03
UBE2D3-219ENST00000505207 SSFA2P28290 1259 aa15.26■□□□□ 0.03
UBE2D3-219ENST00000505207 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.25■□□□□ 0.03
UBE2D3-219ENST00000505207 GIGYF1O75420 1035 aaPredicted RBP15.25■□□□□ 0.03
UBE2D3-219ENST00000505207 PHKG2P15735 406 aa15.25■□□□□ 0.03
UBE2D3-219ENST00000505207 TNNT2P45379 298 aaPredicted RBP15.25■□□□□ 0.03
UBE2D3-219ENST00000505207 TUBGCP6Q96RT7 1819 aa15.24■□□□□ 0.03
UBE2D3-219ENST00000505207 PHF14O94880 888 aa15.24■□□□□ 0.03
UBE2D3-219ENST00000505207 ATP6V1AP38606 617 aa15.24■□□□□ 0.03
UBE2D3-219ENST00000505207 EIF4A2Q14240 407 aaKnown RBP15.24■□□□□ 0.03
UBE2D3-219ENST00000505207 PLEKHO1Q53GL0 409 aaPredicted RBP15.24■□□□□ 0.03
UBE2D3-219ENST00000505207 C5P01031 1676 aa15.23■□□□□ 0.03
UBE2D3-219ENST00000505207 SENP3-EIF4A1A0A087X0R7 540 aa15.23■□□□□ 0.03
UBE2D3-219ENST00000505207 ERVV-2B6SEH9 535 aa15.23■□□□□ 0.03
UBE2D3-219ENST00000505207 YBX3P16989 372 aaKnown RBP eCLIP15.23■□□□□ 0.034e-8■□□□□ 8.6
UBE2D3-219ENST00000505207 ASAP1Q9ULH1 1129 aa15.23■□□□□ 0.03
UBE2D3-219ENST00000505207 AMOTQ4VCS5 1084 aa15.22■□□□□ 0.03
UBE2D3-219ENST00000505207 DCAF5Q96JK2 942 aa15.22■□□□□ 0.03
UBE2D3-219ENST00000505207 PANK3Q9H999 370 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms