RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 NUTM2GQ5VZR2 741 aa8.86□□□□□ -0.99
GYPB-204ENST00000504951 POTEGQ6S5H5 508 aa8.86□□□□□ -0.99
GYPB-204ENST00000504951 BMP2KQ9NSY1 1161 aaPredicted RBP8.86□□□□□ -0.99
GYPB-204ENST00000504951 PCDH10Q9P2E7 1040 aa8.86□□□□□ -0.99
GYPB-204ENST00000504951 LRRC37A3O60309 1634 aa8.86□□□□□ -0.99
GYPB-204ENST00000504951 SLIT3O75094 1523 aa8.85□□□□□ -0.99
GYPB-204ENST00000504951 MAP3K13O43283 966 aa8.85□□□□□ -0.99
GYPB-204ENST00000504951 TOM1L2Q6ZVM7 507 aa8.85□□□□□ -0.99
GYPB-204ENST00000504951 ARHGEF25Q86VW2 580 aa8.85□□□□□ -0.99
GYPB-204ENST00000504951 RASEFQ8IZ41 740 aa8.85□□□□□ -0.99
GYPB-204ENST00000504951 TOPAZ1Q8N9V7 1692 aa8.85□□□□□ -0.99
GYPB-204ENST00000504951 COL18A1P39060 1754 aa8.84□□□□□ -0.99
GYPB-204ENST00000504951 CCDC7Q96M83 1385 aa8.84□□□□□ -0.99
GYPB-204ENST00000504951 PAPPAQ13219 1627 aa8.83□□□□□ -1
GYPB-204ENST00000504951 HSPA6P17066 643 aa8.83□□□□□ -1
GYPB-204ENST00000504951 SLC27A3Q5K4L6 730 aa8.83□□□□□ -1
GYPB-204ENST00000504951 KCNH5Q8NCM2 988 aa8.83□□□□□ -1
GYPB-204ENST00000504951 AXIN2Q9Y2T1 843 aa8.83□□□□□ -1
GYPB-204ENST00000504951 SHANK3Q9BYB0 1731 aa8.83□□□□□ -1
GYPB-204ENST00000504951 ABCC6O95255 1503 aa8.82□□□□□ -1
GYPB-204ENST00000504951 POTEJP0CG39 1038 aa8.82□□□□□ -1
GYPB-204ENST00000504951 HMGB2P26583 209 aaKnown RBP8.82□□□□□ -1
GYPB-204ENST00000504951 POLD1P28340 1107 aa8.82□□□□□ -1
GYPB-204ENST00000504951 NLRP6P59044 892 aa8.82□□□□□ -1
GYPB-204ENST00000504951 DCAF11Q8TEB1 546 aa8.82□□□□□ -1
GYPB-204ENST00000504951 QSER1Q2KHR3 1735 aa8.82□□□□□ -1
GYPB-204ENST00000504951 ARHGEF28Q8N1W1 1705 aaKnown RBP8.82□□□□□ -1
GYPB-204ENST00000504951 USP6P35125 1406 aa8.8□□□□□ -1
GYPB-204ENST00000504951 TNS2Q63HR2 1409 aa8.8□□□□□ -1
GYPB-204ENST00000504951 SEC24BO95487 1268 aa8.8□□□□□ -1
GYPB-204ENST00000504951 LRRC4BQ9NT99 713 aa8.8□□□□□ -1
GYPB-204ENST00000504951 AKAP12Q02952 1782 aa8.8□□□□□ -1
GYPB-204ENST00000504951 WNK3Q9BYP7 1800 aa8.8□□□□□ -1
GYPB-204ENST00000504951 TRPM1Q7Z4N2 1603 aa8.8□□□□□ -1
GYPB-204ENST00000504951 CPSF1Q10570 1443 aaKnown RBP8.8□□□□□ -1
GYPB-204ENST00000504951 PPIP5K1Q6PFW1 1433 aa8.8□□□□□ -1
GYPB-204ENST00000504951 NHSQ6T4R5 1651 aa8.79□□□□□ -1
GYPB-204ENST00000504951 ADCY9O60503 1353 aa8.79□□□□□ -1
GYPB-204ENST00000504951 TTLL13PA6NNM8 815 aa8.79□□□□□ -1
GYPB-204ENST00000504951 ZNF827Q17R98 1081 aa8.79□□□□□ -1
GYPB-204ENST00000504951 IER5LQ5T953 404 aa8.79□□□□□ -1
GYPB-204ENST00000504951 TTC21AQ8NDW8 1320 aa8.79□□□□□ -1
GYPB-204ENST00000504951 FAM212AQ96EL1 285 aa8.78□□□□□ -1
GYPB-204ENST00000504951 TRPC6Q9Y210 931 aa8.78□□□□□ -1
GYPB-204ENST00000504951 KDM2AQ9Y2K7 1162 aa8.78□□□□□ -1
GYPB-204ENST00000504951 PCDHB13Q9Y5F0 798 aa8.78□□□□□ -1
GYPB-204ENST00000504951 CD2APQ9Y5K6 639 aa8.78□□□□□ -1
GYPB-204ENST00000504951 PNPLA7Q6ZV29 1317 aa8.78□□□□□ -1
GYPB-204ENST00000504951 GOLGB1Q14789 3259 aaKnown RBP8.78□□□□□ -1
GYPB-204ENST00000504951 KIAA1210Q9ULL0 1709 aa8.77□□□□□ -1
GYPB-204ENST00000504951 YBX3P16989 372 aaKnown RBP eCLIP8.77□□□□□ -1.016e-7■■■□□ 14.8
GYPB-204ENST00000504951 GPBP1L1Q9HC44 474 aaPredicted RBP8.77□□□□□ -1.01
GYPB-204ENST00000504951 CABP1Q9NZU7 370 aa8.77□□□□□ -1.01
GYPB-204ENST00000504951 IL2RBP14784 551 aa8.76□□□□□ -1.01
GYPB-204ENST00000504951 SRPK2P78362 688 aaKnown RBP8.76□□□□□ -1.01
GYPB-204ENST00000504951 DNAJC5GQ8N7S2 189 aa8.76□□□□□ -1.01
GYPB-204ENST00000504951 ATP10DQ9P241 1426 aa8.76□□□□□ -1.01
GYPB-204ENST00000504951 TTC21BQ7Z4L5 1316 aa8.76□□□□□ -1.01
GYPB-204ENST00000504951 POTEFA5A3E0 1075 aa8.75□□□□□ -1.01
GYPB-204ENST00000504951 APLP1P51693 650 aa8.75□□□□□ -1.01
GYPB-204ENST00000504951 NUBP1P53384 320 aa8.75□□□□□ -1.01
GYPB-204ENST00000504951 NLGN2Q8NFZ4 835 aa8.75□□□□□ -1.01
GYPB-204ENST00000504951 ERBB3P21860 1342 aa8.75□□□□□ -1.01
GYPB-204ENST00000504951 CENPJQ9HC77 1338 aaPredicted RBP8.75□□□□□ -1.01
GYPB-204ENST00000504951 USP31Q70CQ4 1352 aa8.74□□□□□ -1.01
GYPB-204ENST00000504951 CSB-PGBD3P0DP91 1061 aa8.74□□□□□ -1.01
GYPB-204ENST00000504951 CABP2Q9NPB3 220 aa8.74□□□□□ -1.01
GYPB-204ENST00000504951 TFCP2L1Q9NZI6 479 aa8.74□□□□□ -1.01
GYPB-204ENST00000504951 TRIM35Q9UPQ4 493 aa8.74□□□□□ -1.01
GYPB-204ENST00000504951 NFAT5O94916 1531 aa8.74□□□□□ -1.01
GYPB-204ENST00000504951 BTAF1O14981 1849 aa8.73□□□□□ -1.01
GYPB-204ENST00000504951 PIK3C2AO00443 1686 aa8.73□□□□□ -1.01
GYPB-204ENST00000504951 KIF3CO14782 793 aa8.73□□□□□ -1.01
GYPB-204ENST00000504951 FLAD1Q8NFF5 587 aa8.73□□□□□ -1.01
GYPB-204ENST00000504951 FAM163AQ96GL9 167 aaPredicted RBP8.73□□□□□ -1.01
GYPB-204ENST00000504951 ACSBG1Q96GR2 724 aa8.73□□□□□ -1.01
GYPB-204ENST00000504951 KAT6BQ8WYB5 2073 aa8.73□□□□□ -1.01
GYPB-204ENST00000504951 EVC2Q86UK5 1308 aa8.72□□□□□ -1.01
GYPB-204ENST00000504951 ZBTB7CA1YPR0 619 aa8.71□□□□□ -1.02
GYPB-204ENST00000504951 TOMM70O94826 608 aa8.71□□□□□ -1.02
GYPB-204ENST00000504951 NBPF1Q3BBV0 1214 aa8.71□□□□□ -1.02
GYPB-204ENST00000504951 JMYQ8N9B5 988 aa8.71□□□□□ -1.02
GYPB-204ENST00000504951 ANKRD36BQ8N2N9 1353 aa8.71□□□□□ -1.02
GYPB-204ENST00000504951 RGPD5Q99666 1765 aa8.71□□□□□ -1.02
GYPB-204ENST00000504951 QRICH2Q9H0J4 1663 aa8.7□□□□□ -1.02
GYPB-204ENST00000504951 COL23A1Q86Y22 540 aaPredicted RBP8.7□□□□□ -1.02
GYPB-204ENST00000504951 COLQQ9Y215 455 aaPredicted RBP8.7□□□□□ -1.02
GYPB-204ENST00000504951 RAB3GAP2Q9H2M9 1393 aa8.7□□□□□ -1.02
GYPB-204ENST00000504951 USP54Q70EL1 1684 aa8.69□□□□□ -1.02
GYPB-204ENST00000504951 LY75O60449 1722 aa8.69□□□□□ -1.02
GYPB-204ENST00000504951 FKBP8Q14318 412 aa8.69□□□□□ -1.02
GYPB-204ENST00000504951 IFNL1Q8IU54 200 aa8.69□□□□□ -1.02
GYPB-204ENST00000504951 NLRP2Q9NX02 1062 aa8.69□□□□□ -1.02
GYPB-204ENST00000504951 NSD2O96028 1365 aa8.69□□□□□ -1.02
GYPB-204ENST00000504951 PRIM1P49642 420 aaKnown RBP8.68□□□□□ -1.02
GYPB-204ENST00000504951 PRELPP51888 382 aa8.68□□□□□ -1.02
GYPB-204ENST00000504951 LCE2DQ5TA82 110 aaPredicted RBP8.68□□□□□ -1.02
GYPB-204ENST00000504951 KLHL34Q8N239 644 aa8.68□□□□□ -1.02
GYPB-204ENST00000504951 ANKRD24Q8TF21 1146 aa8.68□□□□□ -1.02
GYPB-204ENST00000504951 TMEM106CQ9BVX2 250 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms