RNA–Protein interactions for RNA: ENST00000503080.1

UBE2B-203, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-203ENST00000503080 SOX11P35716 441 aa9.07□□□□□ -0.96
UBE2B-203ENST00000503080 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.07□□□□□ -0.96
UBE2B-203ENST00000503080 RNF135Q8IUD6 432 aa9.07□□□□□ -0.96
UBE2B-203ENST00000503080 NPAS3Q8IXF0 933 aa9.06□□□□□ -0.96
UBE2B-203ENST00000503080 CYP2U1Q7Z449 544 aa9.05□□□□□ -0.96
UBE2B-203ENST00000503080 SLC16A10Q8TF71 515 aa9.05□□□□□ -0.96
UBE2B-203ENST00000503080 OSBPL3Q9H4L5 887 aa9.05□□□□□ -0.96
UBE2B-203ENST00000503080 DOLKQ9UPQ8 538 aa9.05□□□□□ -0.96
UBE2B-203ENST00000503080 A0A1W2PRU2 124 aa9.04□□□□□ -0.96
UBE2B-203ENST00000503080 TRAK2O60296 914 aa9.04□□□□□ -0.96
UBE2B-203ENST00000503080 MYCP01106 439 aaPredicted RBP9.04□□□□□ -0.96
UBE2B-203ENST00000503080 RNF217Q8TC41 542 aa9.04□□□□□ -0.96
UBE2B-203ENST00000503080 CLUAP1Q96AJ1 413 aa9.04□□□□□ -0.96
UBE2B-203ENST00000503080 H3BM21 787 aa9.03□□□□□ -0.96
UBE2B-203ENST00000503080 MEN1O00255 615 aa9.03□□□□□ -0.96
UBE2B-203ENST00000503080 LCE2CQ5TA81 110 aa9.03□□□□□ -0.96
UBE2B-203ENST00000503080 FOXD4L5Q5VV16 416 aaPredicted RBP9.03□□□□□ -0.96
UBE2B-203ENST00000503080 CHIC2Q9UKJ5 165 aa9.03□□□□□ -0.96
UBE2B-203ENST00000503080 PTSQ03393 145 aa9.02□□□□□ -0.97
UBE2B-203ENST00000503080 USP4Q13107 963 aa9.02□□□□□ -0.97
UBE2B-203ENST00000503080 ALG2Q9H553 416 aa9.02□□□□□ -0.97
UBE2B-203ENST00000503080 POM121CA8CG34 1229 aa9.01□□□□□ -0.97
UBE2B-203ENST00000503080 PPFIA3O75145 1194 aa9.01□□□□□ -0.97
UBE2B-203ENST00000503080 RNF144AP50876 292 aaPredicted RBP9.01□□□□□ -0.97
UBE2B-203ENST00000503080 OXLD1Q5BKU9 147 aa9.01□□□□□ -0.97
UBE2B-203ENST00000503080 ARHGEF10LQ9HCE6 1279 aa9.01□□□□□ -0.97
UBE2B-203ENST00000503080 PIK3CDO00329 1044 aa9□□□□□ -0.97
UBE2B-203ENST00000503080 GNRH1P01148 92 aa9□□□□□ -0.97
UBE2B-203ENST00000503080 LYSMD3Q7Z3D4 306 aa9□□□□□ -0.97
UBE2B-203ENST00000503080 PRICKLE2Q7Z3G6 844 aa9□□□□□ -0.97
UBE2B-203ENST00000503080 PLPP7Q8NBV4 271 aa9□□□□□ -0.97
UBE2B-203ENST00000503080 IRF7Q92985 503 aa9□□□□□ -0.97
UBE2B-203ENST00000503080 NLRP3Q96P20 1036 aa9□□□□□ -0.97
UBE2B-203ENST00000503080 RAB6BQ9NRW1 208 aa9□□□□□ -0.97
UBE2B-203ENST00000503080 CLN3Q13286 438 aa8.99□□□□□ -0.97
UBE2B-203ENST00000503080 MAP7D1Q3KQU3 841 aa8.99□□□□□ -0.97
UBE2B-203ENST00000503080 ERBB4Q15303 1308 aa8.99□□□□□ -0.97
UBE2B-203ENST00000503080 GPC1P35052 558 aa8.98□□□□□ -0.97
UBE2B-203ENST00000503080 PROSER2Q86WR7 435 aaPredicted RBP8.98□□□□□ -0.97
UBE2B-203ENST00000503080 SIRT1Q96EB6 747 aa8.98□□□□□ -0.97
UBE2B-203ENST00000503080 SLC35F4A4IF30 521 aa8.97□□□□□ -0.97
UBE2B-203ENST00000503080 SLC27A3Q5K4L6 730 aa8.97□□□□□ -0.97
UBE2B-203ENST00000503080 HDGFL1Q5TGJ6 251 aa8.97□□□□□ -0.97
UBE2B-203ENST00000503080 FNBP4Q8N3X1 1017 aaPredicted RBP8.97□□□□□ -0.97
UBE2B-203ENST00000503080 CCDC155Q8N6L0 562 aa8.97□□□□□ -0.97
UBE2B-203ENST00000503080 ADAMTS19Q8TE59 1207 aa8.97□□□□□ -0.97
UBE2B-203ENST00000503080 CNKSR1Q969H4 720 aa8.97□□□□□ -0.97
UBE2B-203ENST00000503080 SKIP12755 728 aa8.96□□□□□ -0.98
UBE2B-203ENST00000503080 ESYT1Q9BSJ8 1104 aa8.96□□□□□ -0.98
UBE2B-203ENST00000503080 SENP3-EIF4A1A0A087X0R7 540 aa8.95□□□□□ -0.98
UBE2B-203ENST00000503080 WIPF1O43516 503 aa8.95□□□□□ -0.98
UBE2B-203ENST00000503080 STAU1O95793 577 aaKnown RBP8.95□□□□□ -0.98
UBE2B-203ENST00000503080 IL2RAP01589 272 aa8.95□□□□□ -0.98
UBE2B-203ENST00000503080 RHOQP17081 205 aa8.95□□□□□ -0.98
UBE2B-203ENST00000503080 GMPRP36959 345 aa8.95□□□□□ -0.98
UBE2B-203ENST00000503080 ESCO1Q5FWF5 840 aa8.94□□□□□ -0.98
UBE2B-203ENST00000503080 NFATC2IPQ8NCF5 419 aa8.94□□□□□ -0.98
UBE2B-203ENST00000503080 GRIP2Q9C0E4 1043 aa8.94□□□□□ -0.98
UBE2B-203ENST00000503080 A6NJR5 290 aa8.93□□□□□ -0.98
UBE2B-203ENST00000503080 VSIG8P0DPA2 414 aa8.93□□□□□ -0.98
UBE2B-203ENST00000503080 CENPCQ03188 943 aa8.93□□□□□ -0.98
UBE2B-203ENST00000503080 POU4F2Q12837 409 aa8.93□□□□□ -0.98
UBE2B-203ENST00000503080 XAGE2Q96GT9 111 aa8.93□□□□□ -0.98
UBE2B-203ENST00000503080 ETNK1Q9HBU6 452 aa8.93□□□□□ -0.98
UBE2B-203ENST00000503080 HRH3Q9Y5N1 445 aa8.93□□□□□ -0.98
UBE2B-203ENST00000503080 ITGA6P23229 1130 aa8.92□□□□□ -0.98
UBE2B-203ENST00000503080 EML3Q32P44 896 aa8.92□□□□□ -0.98
UBE2B-203ENST00000503080 NCOA4Q13772 614 aa8.91□□□□□ -0.98
UBE2B-203ENST00000503080 DEPDC4Q8N2C3 294 aa8.91□□□□□ -0.98
UBE2B-203ENST00000503080 UCN2Q96RP3 112 aa8.91□□□□□ -0.98
UBE2B-203ENST00000503080 USP17L5A8MUK1 530 aa8.9□□□□□ -0.98
UBE2B-203ENST00000503080 SPATA31C2B4DYI2 1134 aa8.9□□□□□ -0.98
UBE2B-203ENST00000503080 LZTS3O60299 673 aaPredicted RBP8.9□□□□□ -0.98
UBE2B-203ENST00000503080 SCNN1DP51172 638 aa8.9□□□□□ -0.98
UBE2B-203ENST00000503080 NBPF10Q6P3W6 841 aaKnown RBP8.9□□□□□ -0.98
UBE2B-203ENST00000503080 TBC1D9Q6ZT07 1266 aa8.9□□□□□ -0.98
UBE2B-203ENST00000503080 NBPF15Q8N660 670 aa8.9□□□□□ -0.98
UBE2B-203ENST00000503080 GLMNQ92990 594 aa8.9□□□□□ -0.98
UBE2B-203ENST00000503080 ZSCAN10Q96SZ4 725 aaPredicted RBP8.9□□□□□ -0.98
UBE2B-203ENST00000503080 NOD1Q9Y239 953 aa8.9□□□□□ -0.98
UBE2B-203ENST00000503080 CDC14CA4D256 554 aa8.89□□□□□ -0.99
UBE2B-203ENST00000503080 GDF10P55107 478 aa8.89□□□□□ -0.99
UBE2B-203ENST00000503080 VWA5B2Q8N398 1253 aa8.89□□□□□ -0.99
UBE2B-203ENST00000503080 GPR161Q8N6U8 529 aaKnown RBP8.89□□□□□ -0.99
UBE2B-203ENST00000503080 NANOS1Q8WY41 292 aaKnown RBP8.89□□□□□ -0.99
UBE2B-203ENST00000503080 PCDHGA11Q9Y5H2 935 aa8.89□□□□□ -0.99
UBE2B-203ENST00000503080 WASLO00401 505 aaPredicted RBP8.88□□□□□ -0.99
UBE2B-203ENST00000503080 INHAP05111 366 aa8.88□□□□□ -0.99
UBE2B-203ENST00000503080 INSM1Q01101 510 aaPredicted RBP8.88□□□□□ -0.99
UBE2B-203ENST00000503080 TAS1R3Q7RTX0 852 aa8.88□□□□□ -0.99
UBE2B-203ENST00000503080 FHDC1Q9C0D6 1143 aaPredicted RBP8.88□□□□□ -0.99
UBE2B-203ENST00000503080 GTF2E1P29083 439 aaPredicted RBP8.87□□□□□ -0.99
UBE2B-203ENST00000503080 GTF2IP78347 998 aa8.87□□□□□ -0.99
UBE2B-203ENST00000503080 TLR1Q15399 786 aa8.87□□□□□ -0.99
UBE2B-203ENST00000503080 WDR44Q5JSH3 913 aa8.87□□□□□ -0.99
UBE2B-203ENST00000503080 TMEM214Q6NUQ4 689 aaKnown RBP8.87□□□□□ -0.99
UBE2B-203ENST00000503080 GAS2L1Q99501 681 aaPredicted RBP8.87□□□□□ -0.99
UBE2B-203ENST00000503080 CUEDC1Q9NWM3 386 aaPredicted RBP8.87□□□□□ -0.99
UBE2B-203ENST00000503080 DYRK1BQ9Y463 629 aa8.87□□□□□ -0.99
UBE2B-203ENST00000503080 ATP9BO43861 1147 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms