RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 YBX3P16989 372 aaKnown RBP eCLIP18.07■□□□□ 0.48
LMNA-218ENST00000502357 HOXC9P31274 260 aa18.06■□□□□ 0.48
LMNA-218ENST00000502357 HDGFL2Q7Z4V5 671 aaPredicted RBP18.06■□□□□ 0.48
LMNA-218ENST00000502357 TMC1Q8TDI8 760 aa18.06■□□□□ 0.48
LMNA-218ENST00000502357 COL23A1Q86Y22 540 aaPredicted RBP18.05■□□□□ 0.48
LMNA-218ENST00000502357 TESK2Q96S53 571 aa18.05■□□□□ 0.48
LMNA-218ENST00000502357 POLD1P28340 1107 aa18.04■□□□□ 0.48
LMNA-218ENST00000502357 LTV1Q96GA3 475 aaPredicted RBP18.04■□□□□ 0.48
LMNA-218ENST00000502357 CARD11Q9BXL7 1154 aa18.04■□□□□ 0.48
LMNA-218ENST00000502357 TFCP2L1Q9NZI6 479 aa18.04■□□□□ 0.48
LMNA-218ENST00000502357 CEP350Q5VT06 3117 aa18.03■□□□□ 0.48
LMNA-218ENST00000502357 TERF2IPQ9NYB0 399 aa18.03■□□□□ 0.48
LMNA-218ENST00000502357 ZCRB1Q8TBF4 217 aaKnown RBP18.02■□□□□ 0.48
LMNA-218ENST00000502357 NBPF6Q5VWK0 638 aa18.01■□□□□ 0.47
LMNA-218ENST00000502357 NBPF4Q96M43 638 aa18.01■□□□□ 0.47
LMNA-218ENST00000502357 TAF1LQ8IZX4 1826 aa18■□□□□ 0.47
LMNA-218ENST00000502357 GIGYF1O75420 1035 aaPredicted RBP18■□□□□ 0.47
LMNA-218ENST00000502357 KLHL34Q8N239 644 aa18■□□□□ 0.47
LMNA-218ENST00000502357 SYTL4Q96C24 671 aaPredicted RBP17.99■□□□□ 0.47
LMNA-218ENST00000502357 CCNL1Q9UK58 526 aaPredicted RBP17.99■□□□□ 0.47
LMNA-218ENST00000502357 AMIGO3Q86WK7 504 aa17.98■□□□□ 0.47
LMNA-218ENST00000502357 C5P01031 1676 aa17.98■□□□□ 0.47
LMNA-218ENST00000502357 TOGARAM1Q9Y4F4 1720 aa17.98■□□□□ 0.47
LMNA-218ENST00000502357 RTL1A6NKG5 1358 aa17.97■□□□□ 0.47
LMNA-218ENST00000502357 ADCY9O60503 1353 aa17.97■□□□□ 0.47
LMNA-218ENST00000502357 COG3Q96JB2 828 aa17.97■□□□□ 0.47
LMNA-218ENST00000502357 PELP1Q8IZL8 1130 aaKnown RBP17.96■□□□□ 0.47
LMNA-218ENST00000502357 FYB1O15117 783 aa17.95■□□□□ 0.46
LMNA-218ENST00000502357 GRIN3BO60391 1043 aa17.95■□□□□ 0.46
LMNA-218ENST00000502357 AMPHP49418 695 aa17.95■□□□□ 0.46
LMNA-218ENST00000502357 RRS1Q15050 365 aaKnown RBP17.95■□□□□ 0.46
LMNA-218ENST00000502357 IFFO2Q5TF58 517 aa17.95■□□□□ 0.46
LMNA-218ENST00000502357 USP47Q96K76 1375 aa17.94■□□□□ 0.46
LMNA-218ENST00000502357 ST20-MTHFSA0A0A6YYL1 179 aa17.94■□□□□ 0.46
LMNA-218ENST00000502357 MSL1Q68DK7 614 aa17.94■□□□□ 0.46
LMNA-218ENST00000502357 USHBP1Q8N6Y0 703 aa17.94■□□□□ 0.46
LMNA-218ENST00000502357 ATP10DQ9P241 1426 aa17.94■□□□□ 0.46
LMNA-218ENST00000502357 CGNL1Q0VF96 1302 aa17.94■□□□□ 0.46
LMNA-218ENST00000502357 MAP2P11137 1827 aaKnown RBP17.93■□□□□ 0.46
LMNA-218ENST00000502357 CD2APQ9Y5K6 639 aa17.93■□□□□ 0.46
LMNA-218ENST00000502357 ITGB4P16144 1822 aa17.93■□□□□ 0.46
LMNA-218ENST00000502357 CYP27B1O15528 508 aa17.92■□□□□ 0.46
LMNA-218ENST00000502357 UBR3Q6ZT12 1888 aa17.92■□□□□ 0.46
LMNA-218ENST00000502357 NCAPD2Q15021 1401 aa17.91■□□□□ 0.46
LMNA-218ENST00000502357 HSP90AB2PQ58FF8 381 aa17.91■□□□□ 0.46
LMNA-218ENST00000502357 C4BP0C0L5 1744 aa17.91■□□□□ 0.46
LMNA-218ENST00000502357 INSRP06213 1382 aa17.91■□□□□ 0.46
LMNA-218ENST00000502357 PALLDQ8WX93 1383 aa17.91■□□□□ 0.46
LMNA-218ENST00000502357 SMIM5Q71RC9 77 aa17.9■□□□□ 0.46
LMNA-218ENST00000502357 GGNBP2Q9H3C7 697 aa17.9■□□□□ 0.46
LMNA-218ENST00000502357 PKD1L3Q7Z443 1732 aa17.89■□□□□ 0.46
LMNA-218ENST00000502357 MSH5O43196 834 aa17.88■□□□□ 0.45
LMNA-218ENST00000502357 TATP17735 454 aaPredicted RBP17.87■□□□□ 0.45
LMNA-218ENST00000502357 NKX1-1Q15270 411 aaPredicted RBP17.87■□□□□ 0.45
LMNA-218ENST00000502357 FLAD1Q8NFF5 587 aa17.87■□□□□ 0.45
LMNA-218ENST00000502357 PCDH11XQ9BZA7 1347 aa17.87■□□□□ 0.45
LMNA-218ENST00000502357 PCDH11YQ9BZA8 1340 aa17.87■□□□□ 0.45
LMNA-218ENST00000502357 RAPGEF4Q8WZA2 1011 aa17.86■□□□□ 0.45
LMNA-218ENST00000502357 PIGBQ92521 554 aa17.86■□□□□ 0.45
LMNA-218ENST00000502357 KIF24Q5T7B8 1368 aa17.85■□□□□ 0.45
LMNA-218ENST00000502357 MPRIPQ6WCQ1 1025 aa17.85■□□□□ 0.45
LMNA-218ENST00000502357 KIAA1551Q9HCM1 1747 aa17.85■□□□□ 0.45
LMNA-218ENST00000502357 FLT4P35916 1363 aa17.84■□□□□ 0.45
LMNA-218ENST00000502357 CARD14Q9BXL6 1004 aa17.84■□□□□ 0.45
LMNA-218ENST00000502357 KIF20BQ96Q89 1820 aa17.84■□□□□ 0.45
LMNA-218ENST00000502357 CICQ96RK0 1608 aaPredicted RBP17.83■□□□□ 0.45
LMNA-218ENST00000502357 TONSLQ96HA7 1378 aa17.83■□□□□ 0.45
LMNA-218ENST00000502357 IGSF1Q8N6C5 1336 aa17.82■□□□□ 0.44
LMNA-218ENST00000502357 ANKRD26Q9UPS8 1709 aa17.82■□□□□ 0.44
LMNA-218ENST00000502357 KIF3CO14782 793 aa17.82■□□□□ 0.44
LMNA-218ENST00000502357 HSPA6P17066 643 aa17.82■□□□□ 0.44
LMNA-218ENST00000502357 LINC00116Q8NCU8 138 aa17.82■□□□□ 0.44
LMNA-218ENST00000502357 GPBP1L1Q9HC44 474 aaPredicted RBP17.82■□□□□ 0.44
LMNA-218ENST00000502357 KIF13BQ9NQT8 1826 aa17.82■□□□□ 0.44
LMNA-218ENST00000502357 SMG6Q86US8 1419 aaKnown RBP17.81■□□□□ 0.44
LMNA-218ENST00000502357 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.81■□□□□ 0.44
LMNA-218ENST00000502357 SLC24A1O60721 1099 aa17.81■□□□□ 0.44
LMNA-218ENST00000502357 EMILIN1Q9Y6C2 1016 aa17.81■□□□□ 0.44
LMNA-218ENST00000502357 ITPK1Q13572 414 aa17.8■□□□□ 0.44
LMNA-218ENST00000502357 SMARCC1Q92922 1105 aaPredicted RBP17.8■□□□□ 0.44
LMNA-218ENST00000502357 SSFA2P28290 1259 aa17.79■□□□□ 0.44
LMNA-218ENST00000502357 LOC102724428A0A0B4J2F2 783 aa17.78■□□□□ 0.44
LMNA-218ENST00000502357 SIK1P57059 783 aa17.78■□□□□ 0.44
LMNA-218ENST00000502357 AK7Q96M32 723 aa17.78■□□□□ 0.44
LMNA-218ENST00000502357 ASAP1Q9ULH1 1129 aa17.78■□□□□ 0.44
LMNA-218ENST00000502357 PHF14O94880 888 aa17.77■□□□□ 0.44
LMNA-218ENST00000502357 HMGB2P26583 209 aaKnown RBP17.77■□□□□ 0.44
LMNA-218ENST00000502357 ZNF526Q8TF50 670 aaPredicted RBP17.77■□□□□ 0.44
LMNA-218ENST00000502357 WWC3Q9ULE0 1092 aa17.77■□□□□ 0.44
LMNA-218ENST00000502357 NSD3Q9BZ95 1437 aa17.77■□□□□ 0.44
LMNA-218ENST00000502357 PXDNLA1KZ92 1463 aa17.76■□□□□ 0.43
LMNA-218ENST00000502357 TMF1P82094 1093 aa17.76■□□□□ 0.43
LMNA-218ENST00000502357 SLC4A9Q96Q91 983 aa17.76■□□□□ 0.43
LMNA-218ENST00000502357 EYA1Q99502 592 aa17.76■□□□□ 0.43
LMNA-218ENST00000502357 WASHC2AQ641Q2 1341 aa17.75■□□□□ 0.43
LMNA-218ENST00000502357 ATG3Q9NT62 314 aa17.75■□□□□ 0.43
LMNA-218ENST00000502357 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.75■□□□□ 0.43
LMNA-218ENST00000502357 KDRP35968 1356 aa17.75■□□□□ 0.43
LMNA-218ENST00000502357 ZNF831Q5JPB2 1677 aa17.74■□□□□ 0.43
LMNA-218ENST00000502357 N4BP2Q86UW6 1770 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms