RNA–Protein interactions for RNA: ENST00000500893.3

ZCCHC3-201, Transcript of zinc finger CCHC-type containing 3, humanhuman

APPRIS P1 BASIC

Gene ZCCHC3, Length 3,354 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3-201ENST00000500893 CEP85Q6P2H3 762 aa20.41■□□□□ 0.86
ZCCHC3-201ENST00000500893 MSH6P52701 1360 aa20.41■□□□□ 0.86
ZCCHC3-201ENST00000500893 MCTP1Q6DN14 999 aa20.41■□□□□ 0.86
ZCCHC3-201ENST00000500893 NAP1L5Q96NT1 182 aaPredicted RBP20.41■□□□□ 0.86
ZCCHC3-201ENST00000500893 CPS1P31327 1500 aa20.41■□□□□ 0.86
ZCCHC3-201ENST00000500893 TTC22Q5TAA0 569 aa20.4■□□□□ 0.86
ZCCHC3-201ENST00000500893 FAM43AQ8N2R8 423 aa20.4■□□□□ 0.86
ZCCHC3-201ENST00000500893 ROBO2Q9HCK4 1378 aa20.4■□□□□ 0.86
ZCCHC3-201ENST00000500893 TRIM44Q96DX7 344 aaPredicted RBP20.4■□□□□ 0.86
ZCCHC3-201ENST00000500893 EIF2S2P20042 333 aaKnown RBP20.39■□□□□ 0.86
ZCCHC3-201ENST00000500893 INTS3Q68E01 1043 aaKnown RBP20.39■□□□□ 0.86
ZCCHC3-201ENST00000500893 CHAMP1Q96JM3 812 aa20.39■□□□□ 0.86
ZCCHC3-201ENST00000500893 GRPEL1Q9HAV7 217 aa20.39■□□□□ 0.86
ZCCHC3-201ENST00000500893 MED14O60244 1454 aa20.39■□□□□ 0.85
ZCCHC3-201ENST00000500893 ANKRD44Q8N8A2 993 aa20.39■□□□□ 0.85
ZCCHC3-201ENST00000500893 MAP3K19Q56UN5 1328 aa20.39■□□□□ 0.85
ZCCHC3-201ENST00000500893 SNX21Q969T3 373 aa20.38■□□□□ 0.85
ZCCHC3-201ENST00000500893 CHL1O00533 1208 aa20.38■□□□□ 0.85
ZCCHC3-201ENST00000500893 HAP1P54257 671 aaPredicted RBP20.38■□□□□ 0.85
ZCCHC3-201ENST00000500893 AMOTL2Q9Y2J4 779 aa20.38■□□□□ 0.85
ZCCHC3-201ENST00000500893 EID1Q9Y6B2 187 aa20.38■□□□□ 0.85
ZCCHC3-201ENST00000500893 ATP7BP35670 1465 aa20.38■□□□□ 0.85
ZCCHC3-201ENST00000500893 LMOD2Q6P5Q4 547 aa20.38■□□□□ 0.85
ZCCHC3-201ENST00000500893 MAP2P11137 1827 aaKnown RBP20.38■□□□□ 0.85
ZCCHC3-201ENST00000500893 BRPF1P55201 1214 aaPredicted RBP20.37■□□□□ 0.85
ZCCHC3-201ENST00000500893 HMMRO75330 724 aa20.37■□□□□ 0.85
ZCCHC3-201ENST00000500893 PKP1Q13835 747 aa20.37■□□□□ 0.85
ZCCHC3-201ENST00000500893 RPAP2Q8IXW5 612 aaPredicted RBP20.36■□□□□ 0.85
ZCCHC3-201ENST00000500893 CPSF1Q10570 1443 aaKnown RBP20.36■□□□□ 0.85
ZCCHC3-201ENST00000500893 MAP4K4O95819 1239 aaPredicted RBP20.35■□□□□ 0.85
ZCCHC3-201ENST00000500893 IL1RAPL2Q9NP60 686 aa20.35■□□□□ 0.85
ZCCHC3-201ENST00000500893 MRE11P49959 708 aa20.35■□□□□ 0.85
ZCCHC3-201ENST00000500893 PTCH1Q13635 1447 aa20.35■□□□□ 0.85
ZCCHC3-201ENST00000500893 GAS2L3Q86XJ1 694 aa20.35■□□□□ 0.85
ZCCHC3-201ENST00000500893 RICTORQ6R327 1708 aa20.34■□□□□ 0.85
ZCCHC3-201ENST00000500893 VIRMAQ69YN4 1812 aaKnown RBP20.34■□□□□ 0.85
ZCCHC3-201ENST00000500893 TRHP20396 242 aaPredicted RBP20.34■□□□□ 0.85
ZCCHC3-201ENST00000500893 RAB3GAP1Q15042 981 aa20.34■□□□□ 0.85
ZCCHC3-201ENST00000500893 ZGPATQ8N5A5 531 aaKnown RBP20.34■□□□□ 0.85
ZCCHC3-201ENST00000500893 EYA1Q99502 592 aa20.34■□□□□ 0.85
ZCCHC3-201ENST00000500893 TNRQ92752 1358 aa20.34■□□□□ 0.85
ZCCHC3-201ENST00000500893 ANO2Q9NQ90 1003 aa20.34■□□□□ 0.85
ZCCHC3-201ENST00000500893 NEK4P51957 841 aa20.33■□□□□ 0.84
ZCCHC3-201ENST00000500893 ABTB2Q8N961 1025 aa20.33■□□□□ 0.84
ZCCHC3-201ENST00000500893 RABEP1Q15276 862 aa20.32■□□□□ 0.84
ZCCHC3-201ENST00000500893 ST18O60284 1047 aa20.32■□□□□ 0.84
ZCCHC3-201ENST00000500893 CAVIN1Q6NZI2 390 aaKnown RBP20.32■□□□□ 0.84
ZCCHC3-201ENST00000500893 USP26Q9BXU7 913 aa20.32■□□□□ 0.84
ZCCHC3-201ENST00000500893 CLTCQ00610 1675 aaKnown RBP20.31■□□□□ 0.84
ZCCHC3-201ENST00000500893 PPP6R1Q9UPN7 881 aa20.31■□□□□ 0.84
ZCCHC3-201ENST00000500893 CDK12Q9NYV4 1490 aaPredicted RBP20.31■□□□□ 0.84
ZCCHC3-201ENST00000500893 AATKQ6ZMQ8 1374 aa20.31■□□□□ 0.84
ZCCHC3-201ENST00000500893 GNAI2P04899 355 aa20.31■□□□□ 0.84
ZCCHC3-201ENST00000500893 RTL1A6NKG5 1358 aa20.3■□□□□ 0.84
ZCCHC3-201ENST00000500893 PRPF40AO75400 957 aaKnown RBP20.3■□□□□ 0.84
ZCCHC3-201ENST00000500893 BAG4O95429 457 aaKnown RBP20.3■□□□□ 0.84
ZCCHC3-201ENST00000500893 ANXA1P04083 346 aa20.3■□□□□ 0.84
ZCCHC3-201ENST00000500893 CIZ1Q9ULV3 898 aaPredicted RBP20.3■□□□□ 0.84
ZCCHC3-201ENST00000500893 REC8O95072 547 aa20.29■□□□□ 0.84
ZCCHC3-201ENST00000500893 ANP32BQ92688 251 aaKnown RBP20.29■□□□□ 0.84
ZCCHC3-201ENST00000500893 FSD2A1L4K1 749 aa20.29■□□□□ 0.84
ZCCHC3-201ENST00000500893 FLIIQ13045 1269 aa20.29■□□□□ 0.84
ZCCHC3-201ENST00000500893 DTNBO60941 627 aa20.29■□□□□ 0.84
ZCCHC3-201ENST00000500893 UPF3BQ9BZI7 483 aaKnown RBP20.29■□□□□ 0.84
ZCCHC3-201ENST00000500893 LRRFIP2Q9Y608 721 aaKnown RBP20.29■□□□□ 0.84
ZCCHC3-201ENST00000500893 NUTM1Q86Y26 1132 aa20.28■□□□□ 0.84
ZCCHC3-201ENST00000500893 PIK3R4Q99570 1358 aa20.28■□□□□ 0.84
ZCCHC3-201ENST00000500893 PNMA6EA0A0J9YXQ4 647 aa20.28■□□□□ 0.84
ZCCHC3-201ENST00000500893 ERC2O15083 957 aa20.28■□□□□ 0.84
ZCCHC3-201ENST00000500893 PDE1AP54750 535 aa20.27■□□□□ 0.84
ZCCHC3-201ENST00000500893 PTPRCP08575 1304 aa20.27■□□□□ 0.84
ZCCHC3-201ENST00000500893 TMEM2Q9UHN6 1383 aa20.27■□□□□ 0.84
ZCCHC3-201ENST00000500893 LARP6Q9BRS8 491 aaKnown RBP20.27■□□□□ 0.84
ZCCHC3-201ENST00000500893 CCT4P50991 539 aaKnown RBP20.26■□□□□ 0.83
ZCCHC3-201ENST00000500893 XPCQ01831 940 aaPredicted RBP20.26■□□□□ 0.83
ZCCHC3-201ENST00000500893 KIF20BQ96Q89 1820 aa20.26■□□□□ 0.83
ZCCHC3-201ENST00000500893 OS9Q13438 667 aaPredicted RBP20.26■□□□□ 0.83
ZCCHC3-201ENST00000500893 LRRCC1Q9C099 1032 aa20.26■□□□□ 0.83
ZCCHC3-201ENST00000500893 SKOR2Q2VWA4 1001 aaPredicted RBP20.25■□□□□ 0.83
ZCCHC3-201ENST00000500893 HDGFL1Q5TGJ6 251 aa20.25■□□□□ 0.83
ZCCHC3-201ENST00000500893 RBM27Q9P2N5 1060 aaKnown RBP20.25■□□□□ 0.83
ZCCHC3-201ENST00000500893 CCDC30Q5VVM6 783 aa20.25■□□□□ 0.83
ZCCHC3-201ENST00000500893 PHAXQ9H814 394 aaKnown RBP20.25■□□□□ 0.83
ZCCHC3-201ENST00000500893 GNAT3A8MTJ3 354 aa20.24■□□□□ 0.83
ZCCHC3-201ENST00000500893 SURF6O75683 361 aaKnown RBP20.24■□□□□ 0.83
ZCCHC3-201ENST00000500893 DDIT3P35638 169 aa20.24■□□□□ 0.83
ZCCHC3-201ENST00000500893 UBTFL1P0CB47 393 aaPredicted RBP20.23■□□□□ 0.83
ZCCHC3-201ENST00000500893 PLEKHG3A1L390 1219 aa20.23■□□□□ 0.83
ZCCHC3-201ENST00000500893 NASPP49321 788 aaPredicted RBP20.23■□□□□ 0.83
ZCCHC3-201ENST00000500893 MX1P20591 662 aa20.22■□□□□ 0.83
ZCCHC3-201ENST00000500893 NUCB2P80303 420 aa20.21■□□□□ 0.83
ZCCHC3-201ENST00000500893 RNF214Q8ND24 703 aa20.2■□□□□ 0.82
ZCCHC3-201ENST00000500893 ATP10DQ9P241 1426 aa20.2■□□□□ 0.82
ZCCHC3-201ENST00000500893 GNAI3P08754 354 aa20.2■□□□□ 0.82
ZCCHC3-201ENST00000500893 USP6P35125 1406 aa20.2■□□□□ 0.82
ZCCHC3-201ENST00000500893 KCNA6P17658 529 aa20.2■□□□□ 0.82
ZCCHC3-201ENST00000500893 IL17REQ8NFR9 667 aa20.2■□□□□ 0.82
ZCCHC3-201ENST00000500893 PALD1Q9ULE6 856 aa20.2■□□□□ 0.82
ZCCHC3-201ENST00000500893 ESPNB1AK53 854 aa20.19■□□□□ 0.82
ZCCHC3-201ENST00000500893 MCCP23508 829 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms