RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 RBM25P49756 843 aaKnown RBP8.87□□□□□ -0.99
TMEM39A-212ENST00000497993 CLK2P49760 499 aaKnown RBP8.87□□□□□ -0.99
TMEM39A-212ENST00000497993 HNRNPMP52272 730 aaKnown RBP eCLIP8.87□□□□□ -0.998e-7■■■□□ 16.7
TMEM39A-212ENST00000497993 ZNF777Q9ULD5 760 aaPredicted RBP8.87□□□□□ -0.99
TMEM39A-212ENST00000497993 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.86□□□□□ -0.99
TMEM39A-212ENST00000497993 CEP152O94986 1710 aa8.86□□□□□ -0.99
TMEM39A-212ENST00000497993 IGSF3O75054 1194 aa8.86□□□□□ -0.99
TMEM39A-212ENST00000497993 MCM6Q14566 821 aa8.86□□□□□ -0.99
TMEM39A-212ENST00000497993 IFFO2Q5TF58 517 aa8.86□□□□□ -0.99
TMEM39A-212ENST00000497993 GZF1Q9H116 711 aaPredicted RBP8.86□□□□□ -0.99
TMEM39A-212ENST00000497993 POLR3EQ9NVU0 708 aa8.86□□□□□ -0.99
TMEM39A-212ENST00000497993 ABCC5O15440 1437 aa8.86□□□□□ -0.99
TMEM39A-212ENST00000497993 DAPK1P53355 1430 aa8.86□□□□□ -0.99
TMEM39A-212ENST00000497993 ERBINQ96RT1 1412 aa8.86□□□□□ -0.99
TMEM39A-212ENST00000497993 KDM5AP29375 1690 aaKnown RBP8.85□□□□□ -0.99
TMEM39A-212ENST00000497993 CAMSAP1Q5T5Y3 1602 aa8.85□□□□□ -0.99
TMEM39A-212ENST00000497993 FMNL1O95466 1100 aaPredicted RBP8.85□□□□□ -0.99
TMEM39A-212ENST00000497993 PDE4CQ08493 712 aa8.85□□□□□ -0.99
TMEM39A-212ENST00000497993 PRPF38BQ5VTL8 546 aaKnown RBP8.85□□□□□ -0.99
TMEM39A-212ENST00000497993 BRICD5Q6PL45 260 aa8.85□□□□□ -0.99
TMEM39A-212ENST00000497993 HLA-CQ95604 372 aa8.85□□□□□ -0.99
TMEM39A-212ENST00000497993 PCDHGC3Q9UN70 934 aa8.85□□□□□ -0.99
TMEM39A-212ENST00000497993 ARID4BQ4LE39 1312 aaPredicted RBP8.84□□□□□ -0.99
TMEM39A-212ENST00000497993 PZPP20742 1482 aa8.84□□□□□ -0.99
TMEM39A-212ENST00000497993 SPDYE5A6NIY4 337 aa8.84□□□□□ -0.99
TMEM39A-212ENST00000497993 PATL2C9JE40 543 aaKnown RBP8.84□□□□□ -0.99
TMEM39A-212ENST00000497993 GUCA2AQ02747 115 aa8.84□□□□□ -0.99
TMEM39A-212ENST00000497993 SPATA31D1Q6ZQQ2 1576 aa8.84□□□□□ -0.99
TMEM39A-212ENST00000497993 ZNF516Q92618 1163 aa8.84□□□□□ -0.99
TMEM39A-212ENST00000497993 THAP11Q96EK4 314 aa8.84□□□□□ -0.99
TMEM39A-212ENST00000497993 LIMD1Q9UGP4 676 aa8.84□□□□□ -0.99
TMEM39A-212ENST00000497993 ABCC3O15438 1527 aa8.84□□□□□ -0.99
TMEM39A-212ENST00000497993 LMTK2Q8IWU2 1503 aa8.84□□□□□ -0.99
TMEM39A-212ENST00000497993 POLR1AO95602 1720 aaPredicted RBP8.83□□□□□ -1
TMEM39A-212ENST00000497993 UNC13BO14795 1591 aa8.83□□□□□ -1
TMEM39A-212ENST00000497993 PTPRKQ15262 1439 aa8.83□□□□□ -1
TMEM39A-212ENST00000497993 E9PSI1 815 aa8.83□□□□□ -1
TMEM39A-212ENST00000497993 SPSB2Q99619 263 aa8.83□□□□□ -1
TMEM39A-212ENST00000497993 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.83□□□□□ -1
TMEM39A-212ENST00000497993 PCDHB15Q9Y5E8 787 aa8.83□□□□□ -1
TMEM39A-212ENST00000497993 CEP170BQ9Y4F5 1589 aaPredicted RBP8.82□□□□□ -1
TMEM39A-212ENST00000497993 GCC2Q8IWJ2 1684 aa8.82□□□□□ -1
TMEM39A-212ENST00000497993 MTMR2Q13614 643 aa8.82□□□□□ -1
TMEM39A-212ENST00000497993 RETREG2Q8NC44 543 aa8.82□□□□□ -1
TMEM39A-212ENST00000497993 ZBTB3Q9H5J0 574 aa8.82□□□□□ -1
TMEM39A-212ENST00000497993 PLA2R1Q13018 1463 aa8.82□□□□□ -1
TMEM39A-212ENST00000497993 CFAP65Q6ZU64 1925 aaKnown RBP8.82□□□□□ -1
TMEM39A-212ENST00000497993 NCOA1Q15788 1441 aa8.81□□□□□ -1
TMEM39A-212ENST00000497993 ARHGAP31Q2M1Z3 1444 aa8.81□□□□□ -1
TMEM39A-212ENST00000497993 UHRF1BP1Q6BDS2 1440 aa8.81□□□□□ -1
TMEM39A-212ENST00000497993 C6orf229H3BNL8 230 aa8.81□□□□□ -1
TMEM39A-212ENST00000497993 LILRB3O75022 631 aa8.81□□□□□ -1
TMEM39A-212ENST00000497993 ADH1BP00325 375 aa8.81□□□□□ -1
TMEM39A-212ENST00000497993 RETREG3Q86VR2 466 aa8.81□□□□□ -1
TMEM39A-212ENST00000497993 USB1Q9BQ65 265 aaKnown RBP8.81□□□□□ -1
TMEM39A-212ENST00000497993 PLA2G2EQ9NZK7 142 aa8.81□□□□□ -1
TMEM39A-212ENST00000497993 RNF19BQ6ZMZ0 732 aa8.8□□□□□ -1
TMEM39A-212ENST00000497993 PROCA1Q8NCQ7 364 aaPredicted RBP8.8□□□□□ -1
TMEM39A-212ENST00000497993 ZMYM3Q14202 1370 aa8.8□□□□□ -1
TMEM39A-212ENST00000497993 TET3O43151 1660 aa8.8□□□□□ -1
TMEM39A-212ENST00000497993 RRBP1Q9P2E9 1410 aaKnown RBP8.8□□□□□ -1
TMEM39A-212ENST00000497993 ROCK1Q13464 1354 aa8.79□□□□□ -1
TMEM39A-212ENST00000497993 KIF15Q9NS87 1388 aa8.79□□□□□ -1
TMEM39A-212ENST00000497993 TSPY4P0CV99 314 aa8.79□□□□□ -1
TMEM39A-212ENST00000497993 TSPY10P0CW01 314 aa8.79□□□□□ -1
TMEM39A-212ENST00000497993 CSPP1Q1MSJ5 1256 aa8.79□□□□□ -1
TMEM39A-212ENST00000497993 MSS51Q4VC12 460 aa8.79□□□□□ -1
TMEM39A-212ENST00000497993 FOXD4L5Q5VV16 416 aaPredicted RBP8.79□□□□□ -1
TMEM39A-212ENST00000497993 FOXD4L4Q8WXT5 416 aaPredicted RBP8.79□□□□□ -1
TMEM39A-212ENST00000497993 A2ML1A8K2U0 1454 aa8.78□□□□□ -1
TMEM39A-212ENST00000497993 NLRP1Q9C000 1473 aa8.78□□□□□ -1
TMEM39A-212ENST00000497993 UBR1Q8IWV7 1749 aa8.78□□□□□ -1
TMEM39A-212ENST00000497993 NUTM2BA6NNL0 878 aaPredicted RBP8.78□□□□□ -1
TMEM39A-212ENST00000497993 NUTM2EB1AL46 878 aaPredicted RBP8.78□□□□□ -1
TMEM39A-212ENST00000497993 TLL1O43897 1013 aa8.78□□□□□ -1
TMEM39A-212ENST00000497993 HSP90B1P14625 803 aaKnown RBP8.78□□□□□ -1
TMEM39A-212ENST00000497993 NUTM2DQ5VT03 806 aaPredicted RBP8.78□□□□□ -1
TMEM39A-212ENST00000497993 PPP2R2DQ66LE6 453 aa8.78□□□□□ -1
TMEM39A-212ENST00000497993 NUTM2AQ8IVF1 878 aaPredicted RBP8.78□□□□□ -1
TMEM39A-212ENST00000497993 FNBP4Q8N3X1 1017 aaPredicted RBP8.78□□□□□ -1
TMEM39A-212ENST00000497993 NKX2-3Q8TAU0 364 aa8.78□□□□□ -1
TMEM39A-212ENST00000497993 SYMPKQ92797 1274 aaKnown RBP8.78□□□□□ -1
TMEM39A-212ENST00000497993 IQGAP3Q86VI3 1631 aa8.78□□□□□ -1
TMEM39A-212ENST00000497993 EFCAB6Q5THR3 1501 aa8.78□□□□□ -1
TMEM39A-212ENST00000497993 ANKRD30AQ9BXX3 1397 aa8.77□□□□□ -1.01
TMEM39A-212ENST00000497993 PPP1R15AO75807 674 aaPredicted RBP8.77□□□□□ -1.01
TMEM39A-212ENST00000497993 QPCTQ16769 361 aa8.77□□□□□ -1.01
TMEM39A-212ENST00000497993 FAM160A2Q8N612 972 aaPredicted RBP8.77□□□□□ -1.01
TMEM39A-212ENST00000497993 SLC6A16Q9GZN6 736 aa8.77□□□□□ -1.01
TMEM39A-212ENST00000497993 ERVK-7P63135 1459 aa8.77□□□□□ -1.01
TMEM39A-212ENST00000497993 GGCXP38435 758 aa8.76□□□□□ -1.01
TMEM39A-212ENST00000497993 DESI1Q6ICB0 168 aa8.76□□□□□ -1.01
TMEM39A-212ENST00000497993 CABLES1Q8TDN4 633 aa8.76□□□□□ -1.01
TMEM39A-212ENST00000497993 PTPRTO14522 1441 aa8.76□□□□□ -1.01
TMEM39A-212ENST00000497993 RPRD2Q5VT52 1461 aaKnown RBP8.76□□□□□ -1.01
TMEM39A-212ENST00000497993 PIK3C2BO00750 1634 aa8.76□□□□□ -1.01
TMEM39A-212ENST00000497993 NEURL4Q96JN8 1562 aa8.75□□□□□ -1.01
TMEM39A-212ENST00000497993 CDK11BP21127 795 aaKnown RBP8.75□□□□□ -1.01
TMEM39A-212ENST00000497993 MLECQ14165 292 aa8.75□□□□□ -1.01
TMEM39A-212ENST00000497993 PRR7Q8TB68 274 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 328.8 ms