RNA–Protein interactions for RNA: ENST00000497556.5

ATP13A1-214, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 2,442 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-214ENST00000497556 CSPP1Q1MSJ5 1256 aa17.22■□□□□ 0.35
ATP13A1-214ENST00000497556 NWD1Q149M9 1564 aa17.22■□□□□ 0.35
ATP13A1-214ENST00000497556 FBLN1P23142 703 aa17.21■□□□□ 0.35
ATP13A1-214ENST00000497556 RBM33Q96EV2 1170 aaKnown RBP17.21■□□□□ 0.35
ATP13A1-214ENST00000497556 HSP90AB1P08238 724 aaKnown RBP17.21■□□□□ 0.35
ATP13A1-214ENST00000497556 SASS6Q6UVJ0 657 aa17.21■□□□□ 0.35
ATP13A1-214ENST00000497556 TTC21BQ7Z4L5 1316 aa17.21■□□□□ 0.35
ATP13A1-214ENST00000497556 ZNF445P59923 1031 aa17.2■□□□□ 0.34
ATP13A1-214ENST00000497556 COG3Q96JB2 828 aa17.2■□□□□ 0.34
ATP13A1-214ENST00000497556 ZKSCAN5Q9Y2L8 839 aa17.2■□□□□ 0.34
ATP13A1-214ENST00000497556 CLEC17AQ6ZS10 378 aa17.2■□□□□ 0.34
ATP13A1-214ENST00000497556 PNPLA6Q8IY17 1366 aa17.2■□□□□ 0.34
ATP13A1-214ENST00000497556 U2AF1L5P0DN76 240 aaPredicted RBP17.19■□□□□ 0.34
ATP13A1-214ENST00000497556 U2AF1Q01081 240 aaKnown RBP eCLIP17.19■□□□□ 0.34
ATP13A1-214ENST00000497556 POLKQ9UBT6 870 aa17.19■□□□□ 0.34
ATP13A1-214ENST00000497556 ADGRL3Q9HAR2 1447 aa17.19■□□□□ 0.34
ATP13A1-214ENST00000497556 GOLGA6L22H0YM25 854 aa17.19■□□□□ 0.34
ATP13A1-214ENST00000497556 DDX49Q9Y6V7 483 aaKnown RBP17.19■□□□□ 0.34
ATP13A1-214ENST00000497556 SSH2Q76I76 1423 aa17.18■□□□□ 0.34
ATP13A1-214ENST00000497556 MVPQ14764 893 aaKnown RBP17.18■□□□□ 0.34
ATP13A1-214ENST00000497556 MCM5P33992 734 aa17.18■□□□□ 0.34
ATP13A1-214ENST00000497556 NGDNQ8NEJ9 315 aaKnown RBP17.17■□□□□ 0.34
ATP13A1-214ENST00000497556 AATKQ6ZMQ8 1374 aa17.17■□□□□ 0.34
ATP13A1-214ENST00000497556 OVOS2A0A0J9YW53 1432 aa17.17■□□□□ 0.34
ATP13A1-214ENST00000497556 OVOS2Q6IE36 1432 aa17.17■□□□□ 0.34
ATP13A1-214ENST00000497556 U2SURPO15042 1029 aaKnown RBP17.17■□□□□ 0.34
ATP13A1-214ENST00000497556 NCLP19338 710 aaKnown RBP17.17■□□□□ 0.34
ATP13A1-214ENST00000497556 WDR63Q8IWG1 891 aa17.17■□□□□ 0.34
ATP13A1-214ENST00000497556 DIAPH1O60610 1272 aaKnown RBP17.16■□□□□ 0.34
ATP13A1-214ENST00000497556 SSFA2P28290 1259 aa17.16■□□□□ 0.34
ATP13A1-214ENST00000497556 BBXQ8WY36 941 aaPredicted RBP17.16■□□□□ 0.34
ATP13A1-214ENST00000497556 EMILIN1Q9Y6C2 1016 aa17.16■□□□□ 0.34
ATP13A1-214ENST00000497556 CDK12Q9NYV4 1490 aaPredicted RBP17.16■□□□□ 0.34
ATP13A1-214ENST00000497556 GTF2E1P29083 439 aaPredicted RBP17.15■□□□□ 0.34
ATP13A1-214ENST00000497556 KDM4FA0A1W2PPD8 638 aa17.15■□□□□ 0.34
ATP13A1-214ENST00000497556 EXOSC9Q06265 439 aaKnown RBP17.15■□□□□ 0.34
ATP13A1-214ENST00000497556 PIK3C2AO00443 1686 aa17.15■□□□□ 0.34
ATP13A1-214ENST00000497556 BAG4O95429 457 aaKnown RBP17.14■□□□□ 0.33
ATP13A1-214ENST00000497556 TRIM27P14373 513 aa17.14■□□□□ 0.33
ATP13A1-214ENST00000497556 DZIP1LQ8IYY4 767 aaKnown RBP17.14■□□□□ 0.33
ATP13A1-214ENST00000497556 RBSNQ9H1K0 784 aa17.14■□□□□ 0.33
ATP13A1-214ENST00000497556 TTC21AQ8NDW8 1320 aa17.14■□□□□ 0.33
ATP13A1-214ENST00000497556 KIF20AO95235 890 aa17.13■□□□□ 0.33
ATP13A1-214ENST00000497556 RRS1Q15050 365 aaKnown RBP17.13■□□□□ 0.33
ATP13A1-214ENST00000497556 PPP4R3BQ5MIZ7 849 aa17.13■□□□□ 0.33
ATP13A1-214ENST00000497556 GTPBP4Q9BZE4 634 aaKnown RBP17.13■□□□□ 0.33
ATP13A1-214ENST00000497556 CD2BP2O95400 341 aaKnown RBP17.13■□□□□ 0.33
ATP13A1-214ENST00000497556 HSPA2P54652 639 aa17.13■□□□□ 0.33
ATP13A1-214ENST00000497556 ZSCAN23Q3MJ62 389 aa17.13■□□□□ 0.33
ATP13A1-214ENST00000497556 ZKSCAN2Q63HK3 967 aa17.13■□□□□ 0.33
ATP13A1-214ENST00000497556 C14orf37Q86TY3 774 aa17.13■□□□□ 0.33
ATP13A1-214ENST00000497556 FTSJ3Q8IY81 847 aaKnown RBP17.13■□□□□ 0.33
ATP13A1-214ENST00000497556 KIF2CQ99661 725 aa17.13■□□□□ 0.33
ATP13A1-214ENST00000497556 FOXD4L1Q9NU39 408 aa17.12■□□□□ 0.33
ATP13A1-214ENST00000497556 STRCP1A6NGW2 1772 aa17.12■□□□□ 0.33
ATP13A1-214ENST00000497556 SSH1Q8WYL5 1049 aa17.12■□□□□ 0.33
ATP13A1-214ENST00000497556 SMC4Q9NTJ3 1288 aa17.12■□□□□ 0.33
ATP13A1-214ENST00000497556 K7ELQ4 463 aaPredicted RBP17.11■□□□□ 0.33
ATP13A1-214ENST00000497556 ITPRIPQ8IWB1 547 aa17.11■□□□□ 0.33
ATP13A1-214ENST00000497556 LRRC7Q96NW7 1537 aa17.11■□□□□ 0.33
ATP13A1-214ENST00000497556 HDAC1Q13547 482 aaPredicted RBP17.1■□□□□ 0.33
ATP13A1-214ENST00000497556 CCDC27Q2M243 656 aa17.1■□□□□ 0.33
ATP13A1-214ENST00000497556 CAVIN1Q6NZI2 390 aaKnown RBP17.1■□□□□ 0.33
ATP13A1-214ENST00000497556 MARF1Q9Y4F3 1742 aaKnown RBP17.1■□□□□ 0.33
ATP13A1-214ENST00000497556 AK9Q5TCS8 1911 aa17.1■□□□□ 0.33
ATP13A1-214ENST00000497556 MYRIPQ8NFW9 859 aa17.1■□□□□ 0.33
ATP13A1-214ENST00000497556 PLEKHF1Q96S99 279 aa17.1■□□□□ 0.33
ATP13A1-214ENST00000497556 PHF8Q9UPP1 1060 aa17.1■□□□□ 0.33
ATP13A1-214ENST00000497556 USP31Q70CQ4 1352 aa17.1■□□□□ 0.33
ATP13A1-214ENST00000497556 LMTK3Q96Q04 1460 aa17.09■□□□□ 0.33
ATP13A1-214ENST00000497556 PROSER2Q86WR7 435 aaPredicted RBP17.09■□□□□ 0.33
ATP13A1-214ENST00000497556 CCDC39Q9UFE4 941 aa17.09■□□□□ 0.33
ATP13A1-214ENST00000497556 PEAK1Q9H792 1746 aa17.09■□□□□ 0.33
ATP13A1-214ENST00000497556 LETM1O95202 739 aaPredicted RBP17.09■□□□□ 0.33
ATP13A1-214ENST00000497556 TMEM57Q8N5G2 664 aa17.09■□□□□ 0.33
ATP13A1-214ENST00000497556 TRIM35Q9UPQ4 493 aa17.09■□□□□ 0.33
ATP13A1-214ENST00000497556 PRIM1P49642 420 aaKnown RBP17.08■□□□□ 0.33
ATP13A1-214ENST00000497556 GAS2L2Q8NHY3 880 aa17.08■□□□□ 0.33
ATP13A1-214ENST00000497556 NOB1Q9ULX3 412 aaKnown RBP17.08■□□□□ 0.33
ATP13A1-214ENST00000497556 USP54Q70EL1 1684 aa17.08■□□□□ 0.32
ATP13A1-214ENST00000497556 ZNF710Q8N1W2 664 aa17.08■□□□□ 0.32
ATP13A1-214ENST00000497556 SOX12O15370 315 aa17.07■□□□□ 0.32
ATP13A1-214ENST00000497556 IL13P35225 146 aa17.07■□□□□ 0.32
ATP13A1-214ENST00000497556 STRCQ7RTU9 1775 aa17.06■□□□□ 0.32
ATP13A1-214ENST00000497556 ESCO1Q5FWF5 840 aa17.06■□□□□ 0.32
ATP13A1-214ENST00000497556 LMBRD1Q9NUN5 540 aa17.06■□□□□ 0.32
ATP13A1-214ENST00000497556 CBX1P83916 185 aa17.06■□□□□ 0.32
ATP13A1-214ENST00000497556 LNPKQ9C0E8 428 aa17.06■□□□□ 0.32
ATP13A1-214ENST00000497556 TMPOP42166 694 aaKnown RBP17.05■□□□□ 0.32
ATP13A1-214ENST00000497556 MCTP1Q6DN14 999 aa17.05■□□□□ 0.32
ATP13A1-214ENST00000497556 FCHSD2O94868 740 aa17.05■□□□□ 0.32
ATP13A1-214ENST00000497556 NCBP3Q53F19 620 aaKnown RBP17.04■□□□□ 0.32
ATP13A1-214ENST00000497556 ATF7IPQ6VMQ6 1270 aa17.04■□□□□ 0.32
ATP13A1-214ENST00000497556 BCL11BQ9C0K0 894 aaPredicted RBP17.04■□□□□ 0.32
ATP13A1-214ENST00000497556 HMOX1P09601 288 aa17.04■□□□□ 0.32
ATP13A1-214ENST00000497556 PRKAR2BP31323 418 aa17.04■□□□□ 0.32
ATP13A1-214ENST00000497556 GTF2F1P35269 517 aaKnown RBP eCLIP17.04■□□□□ 0.32
ATP13A1-214ENST00000497556 NLRP6P59044 892 aa17.04■□□□□ 0.32
ATP13A1-214ENST00000497556 JARID2Q92833 1246 aaPredicted RBP17.04■□□□□ 0.32
ATP13A1-214ENST00000497556 KIAA2012Q0VF49 1180 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms