RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 TRPM1Q7Z4N2 1603 aa14.44□□□□□ -0.1
RAB11FIP3-211ENST00000495663 DNAJB2P25686 324 aa14.44□□□□□ -0.1
RAB11FIP3-211ENST00000495663 SLC4A3P48751 1232 aa14.44□□□□□ -0.1
RAB11FIP3-211ENST00000495663 RBM26Q5T8P6 1007 aaKnown RBP14.44□□□□□ -0.1
RAB11FIP3-211ENST00000495663 PIK3R4Q99570 1358 aa14.44□□□□□ -0.1
RAB11FIP3-211ENST00000495663 NECTIN2Q92692 538 aa14.43□□□□□ -0.1
RAB11FIP3-211ENST00000495663 C14orf93Q9H972 538 aaKnown RBP14.43□□□□□ -0.1
RAB11FIP3-211ENST00000495663 TESPA1A2RU30 521 aaPredicted RBP14.42□□□□□ -0.1
RAB11FIP3-211ENST00000495663 CFAP70Q5T0N1 1121 aa14.42□□□□□ -0.1
RAB11FIP3-211ENST00000495663 NKX2-3Q8TAU0 364 aa14.42□□□□□ -0.1
RAB11FIP3-211ENST00000495663 NWD1Q149M9 1564 aa14.42□□□□□ -0.1
RAB11FIP3-211ENST00000495663 STRCP1A6NGW2 1772 aa14.42□□□□□ -0.1
RAB11FIP3-211ENST00000495663 RCCD1A6NED2 376 aa14.41□□□□□ -0.1
RAB11FIP3-211ENST00000495663 METP08581 1390 aa14.41□□□□□ -0.1
RAB11FIP3-211ENST00000495663 ASXL1Q8IXJ9 1541 aa14.41□□□□□ -0.1
RAB11FIP3-211ENST00000495663 TMEM134Q9H6X4 195 aa14.4□□□□□ -0.1
RAB11FIP3-211ENST00000495663 KNDC1Q76NI1 1749 aa14.4□□□□□ -0.1
RAB11FIP3-211ENST00000495663 XRN1Q8IZH2 1706 aaKnown RBP14.4□□□□□ -0.1
RAB11FIP3-211ENST00000495663 ADGRB1O14514 1584 aa14.39□□□□□ -0.11
RAB11FIP3-211ENST00000495663 NBPF8Q3BBV2 869 aa14.39□□□□□ -0.11
RAB11FIP3-211ENST00000495663 PPP1R18Q6NYC8 613 aa14.39□□□□□ -0.11
RAB11FIP3-211ENST00000495663 ZNF335Q9H4Z2 1342 aaPredicted RBP14.39□□□□□ -0.11
RAB11FIP3-211ENST00000495663 KCNA6P17658 529 aa14.38□□□□□ -0.11
RAB11FIP3-211ENST00000495663 PTPRUQ92729 1446 aa14.38□□□□□ -0.11
RAB11FIP3-211ENST00000495663 NKTRP30414 1462 aaKnown RBP14.38□□□□□ -0.11
RAB11FIP3-211ENST00000495663 RALGAPBQ86X10 1494 aa14.38□□□□□ -0.11
RAB11FIP3-211ENST00000495663 CPS1P31327 1500 aa14.37□□□□□ -0.11
RAB11FIP3-211ENST00000495663 TMEM132EQ6IEE7 984 aa14.37□□□□□ -0.11
RAB11FIP3-211ENST00000495663 YTHDC2Q9H6S0 1430 aaKnown RBP14.37□□□□□ -0.11
RAB11FIP3-211ENST00000495663 ROCK2O75116 1388 aaKnown RBP14.36□□□□□ -0.11
RAB11FIP3-211ENST00000495663 AMOTL2Q9Y2J4 779 aa14.36□□□□□ -0.11
RAB11FIP3-211ENST00000495663 PCDHB3Q9Y5E6 796 aa14.36□□□□□ -0.11
RAB11FIP3-211ENST00000495663 LTBP4Q8N2S1 1624 aa14.36□□□□□ -0.11
RAB11FIP3-211ENST00000495663 LRPPRCP42704 1394 aaKnown RBP14.35□□□□□ -0.11
RAB11FIP3-211ENST00000495663 NBPF1Q3BBV0 1214 aa14.35□□□□□ -0.11
RAB11FIP3-211ENST00000495663 STK26Q9P289 416 aa14.34□□□□□ -0.11
RAB11FIP3-211ENST00000495663 ARHGEF28Q8N1W1 1705 aaKnown RBP14.34□□□□□ -0.11
RAB11FIP3-211ENST00000495663 ABCC11Q96J66 1382 aa14.34□□□□□ -0.11
RAB11FIP3-211ENST00000495663 TECPR2O15040 1411 aa14.33□□□□□ -0.11
RAB11FIP3-211ENST00000495663 PTCH1Q13635 1447 aa14.33□□□□□ -0.11
RAB11FIP3-211ENST00000495663 DLC1Q96QB1 1528 aa14.33□□□□□ -0.12
RAB11FIP3-211ENST00000495663 FECHP22830 423 aa14.33□□□□□ -0.12
RAB11FIP3-211ENST00000495663 BLOC1S3Q6QNY0 202 aa14.33□□□□□ -0.12
RAB11FIP3-211ENST00000495663 PRKD2Q9BZL6 878 aa14.33□□□□□ -0.12
RAB11FIP3-211ENST00000495663 GPRASP1Q5JY77 1395 aa14.33□□□□□ -0.12
RAB11FIP3-211ENST00000495663 XIRP1Q702N8 1843 aaKnown RBP14.32□□□□□ -0.12
RAB11FIP3-211ENST00000495663 HIC1Q14526 733 aa14.32□□□□□ -0.12
RAB11FIP3-211ENST00000495663 SMYD5Q6GMV2 418 aa14.32□□□□□ -0.12
RAB11FIP3-211ENST00000495663 PRR14Q9BWN1 585 aa14.32□□□□□ -0.12
RAB11FIP3-211ENST00000495663 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.32□□□□□ -0.12
RAB11FIP3-211ENST00000495663 ZPR1O75312 459 aa14.31□□□□□ -0.12
RAB11FIP3-211ENST00000495663 CFHP08603 1231 aa14.31□□□□□ -0.12
RAB11FIP3-211ENST00000495663 ZEB1P37275 1124 aaPredicted RBP14.31□□□□□ -0.12
RAB11FIP3-211ENST00000495663 PROSER2Q86WR7 435 aaPredicted RBP14.31□□□□□ -0.12
RAB11FIP3-211ENST00000495663 PXYLP1Q8TE99 480 aa14.31□□□□□ -0.12
RAB11FIP3-211ENST00000495663 CARD11Q9BXL7 1154 aa14.31□□□□□ -0.12
RAB11FIP3-211ENST00000495663 TRAK1Q9UPV9 953 aa14.31□□□□□ -0.12
RAB11FIP3-211ENST00000495663 LRRC7Q96NW7 1537 aa14.31□□□□□ -0.12
RAB11FIP3-211ENST00000495663 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.3□□□□□ -0.12
RAB11FIP3-211ENST00000495663 FAM135BQ49AJ0 1406 aa14.3□□□□□ -0.12
RAB11FIP3-211ENST00000495663 TLL1O43897 1013 aa14.29□□□□□ -0.12
RAB11FIP3-211ENST00000495663 SIRT1Q96EB6 747 aa14.29□□□□□ -0.12
RAB11FIP3-211ENST00000495663 ROBO2Q9HCK4 1378 aa14.29□□□□□ -0.12
RAB11FIP3-211ENST00000495663 GPR37O15354 613 aa14.28□□□□□ -0.12
RAB11FIP3-211ENST00000495663 SLC10A3P09131 477 aa14.28□□□□□ -0.12
RAB11FIP3-211ENST00000495663 TMEM94Q12767 1356 aa14.28□□□□□ -0.12
RAB11FIP3-211ENST00000495663 EIF3AQ14152 1382 aaKnown RBP14.28□□□□□ -0.12
RAB11FIP3-211ENST00000495663 NALCNQ8IZF0 1738 aa14.28□□□□□ -0.12
RAB11FIP3-211ENST00000495663 NCOA3Q9Y6Q9 1424 aa14.28□□□□□ -0.12
RAB11FIP3-211ENST00000495663 QRICH2Q9H0J4 1663 aa14.27□□□□□ -0.12
RAB11FIP3-211ENST00000495663 OATP04181 439 aa14.27□□□□□ -0.13
RAB11FIP3-211ENST00000495663 KMT5BQ4FZB7 885 aa14.27□□□□□ -0.13
RAB11FIP3-211ENST00000495663 Q6ZNB5 142 aa14.27□□□□□ -0.13
RAB11FIP3-211ENST00000495663 METTL3Q86U44 580 aaKnown RBP14.27□□□□□ -0.13
RAB11FIP3-211ENST00000495663 FBXO41Q8TF61 875 aa14.27□□□□□ -0.13
RAB11FIP3-211ENST00000495663 GNPATO15228 680 aa14.26□□□□□ -0.13
RAB11FIP3-211ENST00000495663 PRAM1Q96QH2 718 aa14.26□□□□□ -0.13
RAB11FIP3-211ENST00000495663 POGKQ9P215 609 aa14.26□□□□□ -0.13
RAB11FIP3-211ENST00000495663 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.26□□□□□ -0.13
RAB11FIP3-211ENST00000495663 IQSEC2Q5JU85 1478 aa14.25□□□□□ -0.13
RAB11FIP3-211ENST00000495663 WAPLQ7Z5K2 1190 aa14.25□□□□□ -0.13
RAB11FIP3-211ENST00000495663 C14orf37Q86TY3 774 aa14.25□□□□□ -0.13
RAB11FIP3-211ENST00000495663 NLRP7Q8WX94 980 aa14.25□□□□□ -0.13
RAB11FIP3-211ENST00000495663 PLEKHH1Q9ULM0 1364 aa14.24□□□□□ -0.13
RAB11FIP3-211ENST00000495663 ACTN4O43707 911 aaKnown RBP14.24□□□□□ -0.13
RAB11FIP3-211ENST00000495663 ADGRL3Q9HAR2 1447 aa14.24□□□□□ -0.13
RAB11FIP3-211ENST00000495663 MSH6P52701 1360 aa14.23□□□□□ -0.13
RAB11FIP3-211ENST00000495663 CENPJQ9HC77 1338 aaPredicted RBP14.23□□□□□ -0.13
RAB11FIP3-211ENST00000495663 GGCXP38435 758 aa14.23□□□□□ -0.13
RAB11FIP3-211ENST00000495663 SAFB2Q14151 953 aaKnown RBP eCLIP14.23□□□□□ -0.13
RAB11FIP3-211ENST00000495663 USP47Q96K76 1375 aa14.22□□□□□ -0.13
RAB11FIP3-211ENST00000495663 ADGRB2O60241 1585 aa14.22□□□□□ -0.13
RAB11FIP3-211ENST00000495663 CDC42BPGQ6DT37 1551 aa14.22□□□□□ -0.13
RAB11FIP3-211ENST00000495663 GFRA3O60609 400 aa14.21□□□□□ -0.13
RAB11FIP3-211ENST00000495663 C19orf44Q9H6X5 657 aa14.21□□□□□ -0.13
RAB11FIP3-211ENST00000495663 DCCP43146 1447 aa14.21□□□□□ -0.13
RAB11FIP3-211ENST00000495663 GPIHBP1Q8IV16 184 aa14.2□□□□□ -0.14
RAB11FIP3-211ENST00000495663 MINK1Q8N4C8 1332 aaPredicted RBP14.19□□□□□ -0.14
RAB11FIP3-211ENST00000495663 FMN2Q9NZ56 1722 aa14.19□□□□□ -0.14
RAB11FIP3-211ENST00000495663 EIF4G2P78344 907 aaKnown RBP eCLIP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms