RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 ARHGEF10O15013 1369 aa18.67■□□□□ 0.58
CHTOP-206ENST00000495554 ABTB2Q8N961 1025 aa18.67■□□□□ 0.58
CHTOP-206ENST00000495554 EYA1Q99502 592 aa18.67■□□□□ 0.58
CHTOP-206ENST00000495554 KDRP35968 1356 aa18.65■□□□□ 0.58
CHTOP-206ENST00000495554 ZBTB7BO15156 539 aaPredicted RBP18.65■□□□□ 0.58
CHTOP-206ENST00000495554 IGSF1Q8N6C5 1336 aa18.65■□□□□ 0.58
CHTOP-206ENST00000495554 MCM10Q7L590 875 aa18.65■□□□□ 0.58
CHTOP-206ENST00000495554 ADGRL3Q9HAR2 1447 aa18.65■□□□□ 0.58
CHTOP-206ENST00000495554 USP54Q70EL1 1684 aa18.64■□□□□ 0.57
CHTOP-206ENST00000495554 CHL1O00533 1208 aa18.64■□□□□ 0.57
CHTOP-206ENST00000495554 HOXC9P31274 260 aa18.64■□□□□ 0.57
CHTOP-206ENST00000495554 RTN4Q9NQC3 1192 aaKnown RBP18.64■□□□□ 0.57
CHTOP-206ENST00000495554 ABCC4O15439 1325 aa18.63■□□□□ 0.57
CHTOP-206ENST00000495554 FOXO3O43524 673 aa18.63■□□□□ 0.57
CHTOP-206ENST00000495554 HAP1P54257 671 aaPredicted RBP18.63■□□□□ 0.57
CHTOP-206ENST00000495554 MTHFSDQ2M296 383 aaKnown RBP18.63■□□□□ 0.57
CHTOP-206ENST00000495554 TBC1D32Q96NH3 1257 aa18.63■□□□□ 0.57
CHTOP-206ENST00000495554 BECN1Q14457 450 aa18.63■□□□□ 0.57
CHTOP-206ENST00000495554 API5Q9BZZ5 524 aaKnown RBP18.63■□□□□ 0.57
CHTOP-206ENST00000495554 NUCB1Q02818 461 aa18.62■□□□□ 0.57
CHTOP-206ENST00000495554 KIF24Q5T7B8 1368 aa18.62■□□□□ 0.57
CHTOP-206ENST00000495554 ESCO1Q5FWF5 840 aa18.61■□□□□ 0.57
CHTOP-206ENST00000495554 CRB1P82279 1406 aa18.61■□□□□ 0.57
CHTOP-206ENST00000495554 KRT24Q2M2I5 525 aa18.6■□□□□ 0.57
CHTOP-206ENST00000495554 NFKBIBQ15653 356 aa18.59■□□□□ 0.57
CHTOP-206ENST00000495554 GCC1Q96CN9 775 aa18.59■□□□□ 0.57
CHTOP-206ENST00000495554 CHD1LQ86WJ1 897 aa18.58■□□□□ 0.57
CHTOP-206ENST00000495554 ORAI2Q96SN7 254 aa18.58■□□□□ 0.57
CHTOP-206ENST00000495554 NWD1Q149M9 1564 aa18.58■□□□□ 0.57
CHTOP-206ENST00000495554 FGD1P98174 961 aa18.58■□□□□ 0.56
CHTOP-206ENST00000495554 PSME1Q06323 249 aa18.58■□□□□ 0.56
CHTOP-206ENST00000495554 C14orf37Q86TY3 774 aa18.58■□□□□ 0.56
CHTOP-206ENST00000495554 KIAA0232Q92628 1395 aa18.58■□□□□ 0.56
CHTOP-206ENST00000495554 LNPKQ9C0E8 428 aa18.56■□□□□ 0.56
CHTOP-206ENST00000495554 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.56■□□□□ 0.56
CHTOP-206ENST00000495554 MIS18AQ9NYP9 233 aa18.55■□□□□ 0.56
CHTOP-206ENST00000495554 GAS2L2Q8NHY3 880 aa18.54■□□□□ 0.56
CHTOP-206ENST00000495554 LTV1Q96GA3 475 aaPredicted RBP18.54■□□□□ 0.56
CHTOP-206ENST00000495554 C1orf115Q9H7X2 142 aa18.54■□□□□ 0.56
CHTOP-206ENST00000495554 IP6K1Q92551 441 aa18.54■□□□□ 0.56
CHTOP-206ENST00000495554 NFAT5O94916 1531 aa18.53■□□□□ 0.56
CHTOP-206ENST00000495554 PROSER2Q86WR7 435 aaPredicted RBP18.53■□□□□ 0.56
CHTOP-206ENST00000495554 INTS3Q68E01 1043 aaKnown RBP18.53■□□□□ 0.56
CHTOP-206ENST00000495554 SIRT2Q8IXJ6 389 aa18.53■□□□□ 0.56
CHTOP-206ENST00000495554 RTF1Q92541 710 aaKnown RBP18.53■□□□□ 0.56
CHTOP-206ENST00000495554 C22orf23Q9BZE7 217 aa18.53■□□□□ 0.56
CHTOP-206ENST00000495554 RTL1A6NKG5 1358 aa18.53■□□□□ 0.56
CHTOP-206ENST00000495554 ANKRD45Q5TZF3 282 aa18.52■□□□□ 0.56
CHTOP-206ENST00000495554 HTATSF1O43719 755 aaKnown RBP18.51■□□□□ 0.55
CHTOP-206ENST00000495554 MFAP1P55081 439 aaKnown RBP18.51■□□□□ 0.55
CHTOP-206ENST00000495554 BMP2KLQ5H9B9 411 aa18.51■□□□□ 0.55
CHTOP-206ENST00000495554 PTPRCP08575 1304 aa18.51■□□□□ 0.55
CHTOP-206ENST00000495554 LTN1O94822 1766 aa18.51■□□□□ 0.55
CHTOP-206ENST00000495554 XPCQ01831 940 aaPredicted RBP18.51■□□□□ 0.55
CHTOP-206ENST00000495554 BCL11BQ9C0K0 894 aaPredicted RBP18.51■□□□□ 0.55
CHTOP-206ENST00000495554 USHBP1Q8N6Y0 703 aa18.5■□□□□ 0.55
CHTOP-206ENST00000495554 NBPF6Q5VWK0 638 aa18.49■□□□□ 0.55
CHTOP-206ENST00000495554 KCNH5Q8NCM2 988 aa18.49■□□□□ 0.55
CHTOP-206ENST00000495554 NBPF4Q96M43 638 aa18.49■□□□□ 0.55
CHTOP-206ENST00000495554 TBC1D2Q9BYX2 928 aa18.49■□□□□ 0.55
CHTOP-206ENST00000495554 GNAT3A8MTJ3 354 aa18.49■□□□□ 0.55
CHTOP-206ENST00000495554 IL17REQ8NFR9 667 aa18.49■□□□□ 0.55
CHTOP-206ENST00000495554 TSPYL4Q9UJ04 414 aa18.49■□□□□ 0.55
CHTOP-206ENST00000495554 C19orf44Q9H6X5 657 aa18.48■□□□□ 0.55
CHTOP-206ENST00000495554 RGS12O14924 1447 aa18.48■□□□□ 0.55
CHTOP-206ENST00000495554 MSH6P52701 1360 aa18.48■□□□□ 0.55
CHTOP-206ENST00000495554 GCP02774 474 aa18.47■□□□□ 0.55
CHTOP-206ENST00000495554 C1orf167Q5SNV9 1468 aa18.46■□□□□ 0.55
CHTOP-206ENST00000495554 FRAT2O75474 233 aaPredicted RBP18.46■□□□□ 0.55
CHTOP-206ENST00000495554 ARHGEF25Q86VW2 580 aa18.46■□□□□ 0.55
CHTOP-206ENST00000495554 KRT28Q7Z3Y7 464 aa18.45■□□□□ 0.54
CHTOP-206ENST00000495554 SLC4A2P04920 1241 aa18.45■□□□□ 0.54
CHTOP-206ENST00000495554 RPAP2Q8IXW5 612 aaPredicted RBP18.45■□□□□ 0.54
CHTOP-206ENST00000495554 ANTXR1Q9H6X2 564 aa18.45■□□□□ 0.54
CHTOP-206ENST00000495554 DCTPP1Q9H773 170 aa18.45■□□□□ 0.54
CHTOP-206ENST00000495554 LRRC37A3O60309 1634 aa18.45■□□□□ 0.54
CHTOP-206ENST00000495554 SLKQ9H2G2 1235 aaPredicted RBP18.44■□□□□ 0.54
CHTOP-206ENST00000495554 MAP3K5Q99683 1374 aa18.44■□□□□ 0.54
CHTOP-206ENST00000495554 ANKRD44Q8N8A2 993 aa18.44■□□□□ 0.54
CHTOP-206ENST00000495554 PHRF1Q9P1Y6 1649 aaKnown RBP18.44■□□□□ 0.54
CHTOP-206ENST00000495554 RBM25P49756 843 aaKnown RBP18.43■□□□□ 0.54
CHTOP-206ENST00000495554 SLIT3O75094 1523 aa18.43■□□□□ 0.54
CHTOP-206ENST00000495554 ZBTB7CA1YPR0 619 aa18.43■□□□□ 0.54
CHTOP-206ENST00000495554 GSE1Q14687 1217 aa18.43■□□□□ 0.54
CHTOP-206ENST00000495554 LRRC59Q96AG4 307 aaKnown RBP18.43■□□□□ 0.54
CHTOP-206ENST00000495554 TRPM3Q9HCF6 1732 aaPredicted RBP18.43■□□□□ 0.54
CHTOP-206ENST00000495554 G2E3Q7L622 706 aa18.42■□□□□ 0.54
CHTOP-206ENST00000495554 ATP10DQ9P241 1426 aa18.42■□□□□ 0.54
CHTOP-206ENST00000495554 TAF7Q15545 349 aaPredicted RBP18.41■□□□□ 0.54
CHTOP-206ENST00000495554 LMOD2Q6P5Q4 547 aa18.41■□□□□ 0.54
CHTOP-206ENST00000495554 RGPD2P0DJD1 1756 aa18.41■□□□□ 0.54
CHTOP-206ENST00000495554 TMEM94Q12767 1356 aa18.41■□□□□ 0.54
CHTOP-206ENST00000495554 STRCP1A6NGW2 1772 aa18.41■□□□□ 0.54
CHTOP-206ENST00000495554 CEP85Q6P2H3 762 aa18.4■□□□□ 0.54
CHTOP-206ENST00000495554 BABAM1Q9NWV8 329 aa18.4■□□□□ 0.54
CHTOP-206ENST00000495554 AXIN2Q9Y2T1 843 aa18.4■□□□□ 0.54
CHTOP-206ENST00000495554 CEMIPQ8WUJ3 1361 aa18.39■□□□□ 0.53
CHTOP-206ENST00000495554 MST1RQ04912 1400 aa18.39■□□□□ 0.53
CHTOP-206ENST00000495554 CCT4P50991 539 aaKnown RBP18.38■□□□□ 0.53
CHTOP-206ENST00000495554 STK31Q9BXU1 1019 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms