RNA–Protein interactions for RNA: ENST00000494580.1

CTNNA3-204, Transcript of catenin alpha 3, humanhuman

TSL 3

Gene CTNNA3, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-204ENST00000494580 SMYD5Q6GMV2 418 aa7.21□□□□□ -1.26
CTNNA3-204ENST00000494580 TYW1BQ6NUM6 668 aa7.21□□□□□ -1.26
CTNNA3-204ENST00000494580 ZDHHC16Q969W1 377 aa7.21□□□□□ -1.26
CTNNA3-204ENST00000494580 SIRT1Q96EB6 747 aa7.21□□□□□ -1.26
CTNNA3-204ENST00000494580 CARD11Q9BXL7 1154 aa7.21□□□□□ -1.26
CTNNA3-204ENST00000494580 CD163L1Q9NR16 1453 aa7.21□□□□□ -1.26
CTNNA3-204ENST00000494580 PNPLA6Q8IY17 1366 aa7.2□□□□□ -1.26
CTNNA3-204ENST00000494580 COL22A1Q8NFW1 1626 aaPredicted RBP7.2□□□□□ -1.26
CTNNA3-204ENST00000494580 ZNF687Q8N1G0 1237 aa7.2□□□□□ -1.26
CTNNA3-204ENST00000494580 TESK2Q96S53 571 aa7.2□□□□□ -1.26
CTNNA3-204ENST00000494580 POGKQ9P215 609 aa7.2□□□□□ -1.26
CTNNA3-204ENST00000494580 MON2Q7Z3U7 1717 aa7.2□□□□□ -1.26
CTNNA3-204ENST00000494580 AKAP12Q02952 1782 aa7.2□□□□□ -1.26
CTNNA3-204ENST00000494580 PIK3C2AO00443 1686 aa7.19□□□□□ -1.26
CTNNA3-204ENST00000494580 WASLO00401 505 aaPredicted RBP7.19□□□□□ -1.26
CTNNA3-204ENST00000494580 OSBPP22059 807 aa7.19□□□□□ -1.26
CTNNA3-204ENST00000494580 PMFBP1Q8TBY8 1022 aa7.19□□□□□ -1.26
CTNNA3-204ENST00000494580 FBXW7Q969H0 707 aa7.19□□□□□ -1.26
CTNNA3-204ENST00000494580 STAC3Q96MF2 364 aa7.19□□□□□ -1.26
CTNNA3-204ENST00000494580 PHRF1Q9P1Y6 1649 aaKnown RBP7.19□□□□□ -1.26
CTNNA3-204ENST00000494580 SBNO2Q9Y2G9 1366 aa7.19□□□□□ -1.26
CTNNA3-204ENST00000494580 ST20-MTHFSA0A0A6YYL1 179 aa7.18□□□□□ -1.26
CTNNA3-204ENST00000494580 ESCO1Q5FWF5 840 aa7.18□□□□□ -1.26
CTNNA3-204ENST00000494580 CDK19Q9BWU1 502 aa7.18□□□□□ -1.26
CTNNA3-204ENST00000494580 ADAM33Q9BZ11 813 aa7.18□□□□□ -1.26
CTNNA3-204ENST00000494580 SOS2Q07890 1332 aaPredicted RBP7.18□□□□□ -1.26
CTNNA3-204ENST00000494580 PPIP5K1Q6PFW1 1433 aa7.18□□□□□ -1.26
CTNNA3-204ENST00000494580 TULP1O00294 542 aaPredicted RBP7.17□□□□□ -1.26
CTNNA3-204ENST00000494580 FOXO3O43524 673 aa7.17□□□□□ -1.26
CTNNA3-204ENST00000494580 EIF3AQ14152 1382 aaKnown RBP7.17□□□□□ -1.26
CTNNA3-204ENST00000494580 TNS3Q68CZ2 1445 aa7.17□□□□□ -1.26
CTNNA3-204ENST00000494580 MAP3K7O43318 606 aa7.16□□□□□ -1.26
CTNNA3-204ENST00000494580 PRIM1P49642 420 aaKnown RBP7.16□□□□□ -1.26
CTNNA3-204ENST00000494580 NUDT16Q96DE0 195 aaKnown RBP7.16□□□□□ -1.26
CTNNA3-204ENST00000494580 AXIN2Q9Y2T1 843 aa7.16□□□□□ -1.26
CTNNA3-204ENST00000494580 POLR3AO14802 1390 aaPredicted RBP7.16□□□□□ -1.26
CTNNA3-204ENST00000494580 JCADQ9P266 1359 aa7.16□□□□□ -1.26
CTNNA3-204ENST00000494580 SSH2Q76I76 1423 aa7.16□□□□□ -1.26
CTNNA3-204ENST00000494580 C11orf95C9JLR9 678 aaPredicted RBP7.15□□□□□ -1.26
CTNNA3-204ENST00000494580 ARHGAP33O14559 1287 aa7.15□□□□□ -1.26
CTNNA3-204ENST00000494580 PTPREP23469 700 aa7.15□□□□□ -1.26
CTNNA3-204ENST00000494580 EN1Q05925 392 aaPredicted RBP7.15□□□□□ -1.26
CTNNA3-204ENST00000494580 C6orf132Q5T0Z8 1188 aa7.15□□□□□ -1.26
CTNNA3-204ENST00000494580 BCL2L12Q9HB09 334 aa7.15□□□□□ -1.26
CTNNA3-204ENST00000494580 A0A1W2PP64 1363 aa7.15□□□□□ -1.26
CTNNA3-204ENST00000494580 USP6P35125 1406 aa7.15□□□□□ -1.27
CTNNA3-204ENST00000494580 PLCH1Q4KWH8 1693 aa7.15□□□□□ -1.27
CTNNA3-204ENST00000494580 HSPA5P11021 654 aaKnown RBP7.14□□□□□ -1.27
CTNNA3-204ENST00000494580 PSEN2P49810 448 aa7.14□□□□□ -1.27
CTNNA3-204ENST00000494580 SRPK2P78362 688 aaKnown RBP7.14□□□□□ -1.27
CTNNA3-204ENST00000494580 CPSF1Q10570 1443 aaKnown RBP7.14□□□□□ -1.27
CTNNA3-204ENST00000494580 RBM26Q5T8P6 1007 aaKnown RBP7.14□□□□□ -1.27
CTNNA3-204ENST00000494580 SPATA31A3Q5VYP0 1347 aa7.14□□□□□ -1.27
CTNNA3-204ENST00000494580 POTEEQ6S8J3 1075 aa7.14□□□□□ -1.27
CTNNA3-204ENST00000494580 USP54Q70EL1 1684 aa7.14□□□□□ -1.27
CTNNA3-204ENST00000494580 NRAPQ86VF7 1730 aa7.14□□□□□ -1.27
CTNNA3-204ENST00000494580 EP400Q96L91 3159 aa7.14□□□□□ -1.27
CTNNA3-204ENST00000494580 KCNK17Q96T54 332 aa7.14□□□□□ -1.27
CTNNA3-204ENST00000494580 KRTAP3-3Q9BYR6 98 aa7.14□□□□□ -1.27
CTNNA3-204ENST00000494580 KRTAP3-2Q9BYR7 98 aa7.14□□□□□ -1.27
CTNNA3-204ENST00000494580 RGS17Q9UGC6 210 aaPredicted RBP7.14□□□□□ -1.27
CTNNA3-204ENST00000494580 ACEP12821 1306 aa7.13□□□□□ -1.27
CTNNA3-204ENST00000494580 NPHP3Q7Z494 1330 aa7.13□□□□□ -1.27
CTNNA3-204ENST00000494580 TSR1Q2NL82 804 aaKnown RBP7.13□□□□□ -1.27
CTNNA3-204ENST00000494580 CABLES1Q8TDN4 633 aa7.13□□□□□ -1.27
CTNNA3-204ENST00000494580 SLIT3O75094 1523 aa7.12□□□□□ -1.27
CTNNA3-204ENST00000494580 NFAT5O94916 1531 aa7.12□□□□□ -1.27
CTNNA3-204ENST00000494580 SBNO1A3KN83 1393 aa7.12□□□□□ -1.27
CTNNA3-204ENST00000494580 PBX2P40425 430 aa7.12□□□□□ -1.27
CTNNA3-204ENST00000494580 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.12□□□□□ -1.27
CTNNA3-204ENST00000494580 KRT28Q7Z3Y7 464 aa7.12□□□□□ -1.27
CTNNA3-204ENST00000494580 CABP1Q9NZU7 370 aa7.12□□□□□ -1.27
CTNNA3-204ENST00000494580 TIMELESSQ9UNS1 1208 aa7.12□□□□□ -1.27
CTNNA3-204ENST00000494580 OVOS2A0A0J9YW53 1432 aa7.11□□□□□ -1.27
CTNNA3-204ENST00000494580 OVOS2Q6IE36 1432 aa7.11□□□□□ -1.27
CTNNA3-204ENST00000494580 ATAD2Q6PL18 1390 aa7.11□□□□□ -1.27
CTNNA3-204ENST00000494580 KIF20BQ96Q89 1820 aa7.11□□□□□ -1.27
CTNNA3-204ENST00000494580 EVC2Q86UK5 1308 aa7.11□□□□□ -1.27
CTNNA3-204ENST00000494580 PLEKHG3A1L390 1219 aa7.11□□□□□ -1.27
CTNNA3-204ENST00000494580 NUTM2BA6NNL0 878 aaPredicted RBP7.11□□□□□ -1.27
CTNNA3-204ENST00000494580 NUTM2EB1AL46 878 aaPredicted RBP7.11□□□□□ -1.27
CTNNA3-204ENST00000494580 NUTM2GQ5VZR2 741 aa7.11□□□□□ -1.27
CTNNA3-204ENST00000494580 ILDR2Q71H61 639 aa7.11□□□□□ -1.27
CTNNA3-204ENST00000494580 NUTM2AQ8IVF1 878 aaPredicted RBP7.11□□□□□ -1.27
CTNNA3-204ENST00000494580 SLC12A5Q9H2X9 1139 aa7.11□□□□□ -1.27
CTNNA3-204ENST00000494580 LMO7Q8WWI1 1683 aa7.11□□□□□ -1.27
CTNNA3-204ENST00000494580 ADAMTS2O95450 1211 aa7.1□□□□□ -1.27
CTNNA3-204ENST00000494580 COL9A1P20849 921 aa7.1□□□□□ -1.27
CTNNA3-204ENST00000494580 DMRTA1Q5VZB9 504 aa7.1□□□□□ -1.27
CTNNA3-204ENST00000494580 ANKRD13DQ6ZTN6 518 aa7.1□□□□□ -1.27
CTNNA3-204ENST00000494580 GLI3P10071 1580 aa7.1□□□□□ -1.27
CTNNA3-204ENST00000494580 COL18A1P39060 1754 aa7.1□□□□□ -1.27
CTNNA3-204ENST00000494580 USP19O94966 1318 aa7.09□□□□□ -1.27
CTNNA3-204ENST00000494580 POTEAQ6S8J7 498 aa7.09□□□□□ -1.27
CTNNA3-204ENST00000494580 NGDNQ8NEJ9 315 aaKnown RBP7.09□□□□□ -1.27
CTNNA3-204ENST00000494580 CDHR5Q9HBB8 845 aa7.09□□□□□ -1.27
CTNNA3-204ENST00000494580 SLIT2O94813 1529 aa7.09□□□□□ -1.27
CTNNA3-204ENST00000494580 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.09□□□□□ -1.27
CTNNA3-204ENST00000494580 PEAK1Q9H792 1746 aa7.09□□□□□ -1.27
CTNNA3-204ENST00000494580 NSD3Q9BZ95 1437 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms