RNA–Protein interactions for RNA: ENST00000491734.6

EXD3-212, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best)

Gene EXD3, Length 2,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-212ENST00000491734 ITPRIPQ8IWB1 547 aa22.79■■□□□ 1.24
EXD3-212ENST00000491734 TMEM57Q8N5G2 664 aa22.79■■□□□ 1.24
EXD3-212ENST00000491734 ANTXR1Q9H6X2 564 aa22.79■■□□□ 1.24
EXD3-212ENST00000491734 KIF16BQ96L93 1317 aa22.79■■□□□ 1.24
EXD3-212ENST00000491734 ORAI2Q96SN7 254 aa22.79■■□□□ 1.24
EXD3-212ENST00000491734 DCCP43146 1447 aa22.78■■□□□ 1.24
EXD3-212ENST00000491734 C1orf167Q5SNV9 1468 aa22.78■■□□□ 1.24
EXD3-212ENST00000491734 TMEM94Q12767 1356 aa22.78■■□□□ 1.24
EXD3-212ENST00000491734 FOXO3O43524 673 aa22.77■■□□□ 1.24
EXD3-212ENST00000491734 SEC24BO95487 1268 aa22.77■■□□□ 1.24
EXD3-212ENST00000491734 HOXC9P31274 260 aa22.77■■□□□ 1.24
EXD3-212ENST00000491734 PSME1Q06323 249 aa22.77■■□□□ 1.24
EXD3-212ENST00000491734 MRPL50Q8N5N7 158 aaKnown RBP22.77■■□□□ 1.24
EXD3-212ENST00000491734 IPO8O15397 1037 aaKnown RBP22.77■■□□□ 1.24
EXD3-212ENST00000491734 TWISTNBQ3B726 338 aaPredicted RBP22.77■■□□□ 1.24
EXD3-212ENST00000491734 L1TD1Q5T7N2 865 aaKnown RBP22.77■■□□□ 1.24
EXD3-212ENST00000491734 TRPM3Q9HCF6 1732 aaPredicted RBP22.76■■□□□ 1.23
EXD3-212ENST00000491734 ZNF428Q96B54 188 aa22.76■■□□□ 1.23
EXD3-212ENST00000491734 MTHFSDQ2M296 383 aaKnown RBP22.76■■□□□ 1.23
EXD3-212ENST00000491734 IGSF1Q8N6C5 1336 aa22.76■■□□□ 1.23
EXD3-212ENST00000491734 LTN1O94822 1766 aa22.76■■□□□ 1.23
EXD3-212ENST00000491734 NFAT5O94916 1531 aa22.75■■□□□ 1.23
EXD3-212ENST00000491734 BRPF1P55201 1214 aaPredicted RBP22.74■■□□□ 1.23
EXD3-212ENST00000491734 TBC1D32Q96NH3 1257 aa22.74■■□□□ 1.23
EXD3-212ENST00000491734 LTV1Q96GA3 475 aaPredicted RBP22.74■■□□□ 1.23
EXD3-212ENST00000491734 DDX19BQ9UMR2 479 aa22.74■■□□□ 1.23
EXD3-212ENST00000491734 MST1RQ04912 1400 aa22.74■■□□□ 1.23
EXD3-212ENST00000491734 UBE2Q2Q8WVN8 375 aa22.73■■□□□ 1.23
EXD3-212ENST00000491734 XIRP1Q702N8 1843 aaKnown RBP22.73■■□□□ 1.23
EXD3-212ENST00000491734 KRT24Q2M2I5 525 aa22.73■■□□□ 1.23
EXD3-212ENST00000491734 RWDD1Q9H446 243 aaPredicted RBP22.73■■□□□ 1.23
EXD3-212ENST00000491734 UPF2Q9HAU5 1272 aaKnown RBP22.73■■□□□ 1.23
EXD3-212ENST00000491734 KDRP35968 1356 aa22.73■■□□□ 1.23
EXD3-212ENST00000491734 PHRF1Q9P1Y6 1649 aaKnown RBP22.72■■□□□ 1.23
EXD3-212ENST00000491734 RTL1A6NKG5 1358 aa22.71■■□□□ 1.23
EXD3-212ENST00000491734 CHL1O00533 1208 aa22.71■■□□□ 1.23
EXD3-212ENST00000491734 XPCQ01831 940 aaPredicted RBP22.71■■□□□ 1.23
EXD3-212ENST00000491734 ATF3P18847 181 aa22.69■■□□□ 1.22
EXD3-212ENST00000491734 ZBTB40Q9NUA8 1239 aa22.69■■□□□ 1.22
EXD3-212ENST00000491734 PDZRN3Q9UPQ7 1066 aa22.69■■□□□ 1.22
EXD3-212ENST00000491734 SLIT3O75094 1523 aa22.69■■□□□ 1.22
EXD3-212ENST00000491734 CRB1P82279 1406 aa22.69■■□□□ 1.22
EXD3-212ENST00000491734 MIS18AQ9NYP9 233 aa22.69■■□□□ 1.22
EXD3-212ENST00000491734 PLEKHG5O94827 1062 aa22.67■■□□□ 1.22
EXD3-212ENST00000491734 ALS2Q96Q42 1657 aa22.67■■□□□ 1.22
EXD3-212ENST00000491734 KCNH5Q8NCM2 988 aa22.67■■□□□ 1.22
EXD3-212ENST00000491734 ARHGAP45Q92619 1136 aa22.67■■□□□ 1.22
EXD3-212ENST00000491734 ZBTB7CA1YPR0 619 aa22.66■■□□□ 1.22
EXD3-212ENST00000491734 USHBP1Q8N6Y0 703 aa22.66■■□□□ 1.22
EXD3-212ENST00000491734 RTF1Q92541 710 aaKnown RBP22.66■■□□□ 1.22
EXD3-212ENST00000491734 TBC1D2Q9BYX2 928 aa22.66■■□□□ 1.22
EXD3-212ENST00000491734 KRT28Q7Z3Y7 464 aa22.65■■□□□ 1.22
EXD3-212ENST00000491734 CADPS2Q86UW7 1296 aa22.65■■□□□ 1.22
EXD3-212ENST00000491734 SLKQ9H2G2 1235 aaPredicted RBP22.65■■□□□ 1.22
EXD3-212ENST00000491734 GAS2L2Q8NHY3 880 aa22.65■■□□□ 1.22
EXD3-212ENST00000491734 HDAC1Q13547 482 aaPredicted RBP22.64■■□□□ 1.21
EXD3-212ENST00000491734 IP6K1Q92551 441 aa22.64■■□□□ 1.21
EXD3-212ENST00000491734 MSH6P52701 1360 aa22.63■■□□□ 1.21
EXD3-212ENST00000491734 FSD2A1L4K1 749 aa22.62■■□□□ 1.21
EXD3-212ENST00000491734 ZBTB7BO15156 539 aaPredicted RBP22.62■■□□□ 1.21
EXD3-212ENST00000491734 ABCC4O15439 1325 aa22.62■■□□□ 1.21
EXD3-212ENST00000491734 LMOD2Q6P5Q4 547 aa22.61■■□□□ 1.21
EXD3-212ENST00000491734 TSPYL4Q9UJ04 414 aa22.6■■□□□ 1.21
EXD3-212ENST00000491734 KIAA0232Q92628 1395 aa22.6■■□□□ 1.21
EXD3-212ENST00000491734 GCP02774 474 aa22.6■■□□□ 1.21
EXD3-212ENST00000491734 NBPF6Q5VWK0 638 aa22.59■■□□□ 1.21
EXD3-212ENST00000491734 NBPF4Q96M43 638 aa22.59■■□□□ 1.21
EXD3-212ENST00000491734 API5Q9BZZ5 524 aaKnown RBP22.59■■□□□ 1.21
EXD3-212ENST00000491734 C1orf115Q9H7X2 142 aa22.59■■□□□ 1.21
EXD3-212ENST00000491734 GNAT3A8MTJ3 354 aa22.58■■□□□ 1.21
EXD3-212ENST00000491734 EIF5BO60841 1220 aaKnown RBP22.58■■□□□ 1.21
EXD3-212ENST00000491734 ARHGEF25Q86VW2 580 aa22.57■■□□□ 1.2
EXD3-212ENST00000491734 RRAGDQ9NQL2 400 aaPredicted RBP22.57■■□□□ 1.2
EXD3-212ENST00000491734 MCM4P33991 863 aa22.57■■□□□ 1.2
EXD3-212ENST00000491734 ZNF335Q9H4Z2 1342 aaPredicted RBP22.56■■□□□ 1.2
EXD3-212ENST00000491734 HTATSF1O43719 755 aaKnown RBP22.56■■□□□ 1.2
EXD3-212ENST00000491734 IL17REQ8NFR9 667 aa22.56■■□□□ 1.2
EXD3-212ENST00000491734 MED1Q15648 1581 aaPredicted RBP22.56■■□□□ 1.2
EXD3-212ENST00000491734 LRRC59Q96AG4 307 aaKnown RBP22.56■■□□□ 1.2
EXD3-212ENST00000491734 NPHP3Q7Z494 1330 aa22.55■■□□□ 1.2
EXD3-212ENST00000491734 GOLGA6L3A6NEY3 463 aa22.55■■□□□ 1.2
EXD3-212ENST00000491734 SMC5Q8IY18 1101 aa22.55■■□□□ 1.2
EXD3-212ENST00000491734 RGPD2P0DJD1 1756 aa22.55■■□□□ 1.2
EXD3-212ENST00000491734 PXDNQ92626 1479 aa22.54■■□□□ 1.2
EXD3-212ENST00000491734 MAP3K5Q99683 1374 aa22.54■■□□□ 1.2
EXD3-212ENST00000491734 CHMP5Q9NZZ3 219 aa22.54■■□□□ 1.2
EXD3-212ENST00000491734 XRCC6P12956 609 aaKnown RBP eCLIP22.53■■□□□ 1.2
EXD3-212ENST00000491734 HAP1P54257 671 aaPredicted RBP22.53■■□□□ 1.2
EXD3-212ENST00000491734 DDX17Q92841 729 aaKnown RBP22.53■■□□□ 1.2
EXD3-212ENST00000491734 RGS12O14924 1447 aa22.52■■□□□ 1.2
EXD3-212ENST00000491734 SLC4A2P04920 1241 aa22.52■■□□□ 1.2
EXD3-212ENST00000491734 LRRC37A3O60309 1634 aa22.51■■□□□ 1.19
EXD3-212ENST00000491734 ISY1Q9ULR0 285 aaKnown RBP22.51■■□□□ 1.19
EXD3-212ENST00000491734 CRYBG1Q9Y4K1 1723 aa22.51■■□□□ 1.19
EXD3-212ENST00000491734 TNS3Q68CZ2 1445 aa22.51■■□□□ 1.19
EXD3-212ENST00000491734 C22orf23Q9BZE7 217 aa22.5■■□□□ 1.19
EXD3-212ENST00000491734 CHMP4BQ9H444 224 aaKnown RBP22.5■■□□□ 1.19
EXD3-212ENST00000491734 CAMTA1Q9Y6Y1 1673 aa22.5■■□□□ 1.19
EXD3-212ENST00000491734 NCAPD2Q15021 1401 aa22.5■■□□□ 1.19
EXD3-212ENST00000491734 SIRT2Q8IXJ6 389 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms