RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 PRDM11Q9NQV5 511 aa10.95□□□□□ -0.66
PDLIM1-203ENST00000490391 KIAA0232Q92628 1395 aa10.94□□□□□ -0.66
PDLIM1-203ENST00000490391 SBF2Q86WG5 1849 aa10.94□□□□□ -0.66
PDLIM1-203ENST00000490391 PDE3BQ13370 1112 aa10.94□□□□□ -0.66
PDLIM1-203ENST00000490391 TMEM132EQ6IEE7 984 aa10.94□□□□□ -0.66
PDLIM1-203ENST00000490391 ANKARQ7Z5J8 1434 aa10.93□□□□□ -0.66
PDLIM1-203ENST00000490391 MAP3K5Q99683 1374 aa10.93□□□□□ -0.66
PDLIM1-203ENST00000490391 PARP4Q9UKK3 1724 aaKnown RBP10.93□□□□□ -0.66
PDLIM1-203ENST00000490391 PLSCR1O15162 318 aa10.93□□□□□ -0.66
PDLIM1-203ENST00000490391 SOX12O15370 315 aa10.93□□□□□ -0.66
PDLIM1-203ENST00000490391 PMFBP1Q8TBY8 1022 aa10.93□□□□□ -0.66
PDLIM1-203ENST00000490391 SPOCK2Q92563 424 aa10.93□□□□□ -0.66
PDLIM1-203ENST00000490391 SIRT1Q96EB6 747 aa10.93□□□□□ -0.66
PDLIM1-203ENST00000490391 SSH2Q76I76 1423 aa10.92□□□□□ -0.66
PDLIM1-203ENST00000490391 PHRF1Q9P1Y6 1649 aaKnown RBP10.92□□□□□ -0.66
PDLIM1-203ENST00000490391 PCNTO95613 3336 aa10.92□□□□□ -0.66
PDLIM1-203ENST00000490391 MS4A4AQ96JQ5 239 aa10.92□□□□□ -0.66
PDLIM1-203ENST00000490391 STRN4Q9NRL3 753 aa10.92□□□□□ -0.66
PDLIM1-203ENST00000490391 PIK3C2GO75747 1445 aa10.92□□□□□ -0.66
PDLIM1-203ENST00000490391 ACIN1Q9UKV3 1341 aaKnown RBP10.91□□□□□ -0.66
PDLIM1-203ENST00000490391 LOC105371045A0A1W2PR82 267 aa10.91□□□□□ -0.66
PDLIM1-203ENST00000490391 CHRNA2Q15822 529 aa10.91□□□□□ -0.66
PDLIM1-203ENST00000490391 POTEEQ6S8J3 1075 aa10.91□□□□□ -0.66
PDLIM1-203ENST00000490391 USP35Q9P2H5 1018 aa10.91□□□□□ -0.66
PDLIM1-203ENST00000490391 PTF1AQ7RTS3 328 aa10.9□□□□□ -0.66
PDLIM1-203ENST00000490391 OVOS2A0A0G2JMS6 1433 aa10.9□□□□□ -0.66
PDLIM1-203ENST00000490391 OVOS2A0A0J9YW53 1432 aa10.9□□□□□ -0.66
PDLIM1-203ENST00000490391 OVOS2Q6IE36 1432 aa10.9□□□□□ -0.66
PDLIM1-203ENST00000490391 LMO7Q8WWI1 1683 aa10.89□□□□□ -0.67
PDLIM1-203ENST00000490391 MTFR1LQ9H019 292 aa10.89□□□□□ -0.67
PDLIM1-203ENST00000490391 GPRASP1Q5JY77 1395 aa10.89□□□□□ -0.67
PDLIM1-203ENST00000490391 PRR36Q9H6K5 1346 aa10.88□□□□□ -0.67
PDLIM1-203ENST00000490391 C11orf95C9JLR9 678 aaPredicted RBP10.88□□□□□ -0.67
PDLIM1-203ENST00000490391 LARP1Q6PKG0 1096 aaKnown RBP10.88□□□□□ -0.67
PDLIM1-203ENST00000490391 SPATA31E1Q6ZUB1 1445 aa10.88□□□□□ -0.67
PDLIM1-203ENST00000490391 TCP11L2Q8N4U5 519 aa10.88□□□□□ -0.67
PDLIM1-203ENST00000490391 AXIN2Q9Y2T1 843 aa10.88□□□□□ -0.67
PDLIM1-203ENST00000490391 DHX57Q6P158 1386 aaKnown RBP10.88□□□□□ -0.67
PDLIM1-203ENST00000490391 ATP7BP35670 1465 aa10.87□□□□□ -0.67
PDLIM1-203ENST00000490391 BCL11BQ9C0K0 894 aaPredicted RBP10.87□□□□□ -0.67
PDLIM1-203ENST00000490391 ANKRD30BQ9BXX2 1392 aa10.87□□□□□ -0.67
PDLIM1-203ENST00000490391 LRRC37A3O60309 1634 aa10.87□□□□□ -0.67
PDLIM1-203ENST00000490391 SLC15A2Q16348 729 aa10.86□□□□□ -0.67
PDLIM1-203ENST00000490391 ARXQ96QS3 562 aa10.86□□□□□ -0.67
PDLIM1-203ENST00000490391 HSPA6P17066 643 aa10.85□□□□□ -0.67
PDLIM1-203ENST00000490391 ZC3H6P61129 1189 aaKnown RBP10.85□□□□□ -0.67
PDLIM1-203ENST00000490391 SAFB2Q14151 953 aaKnown RBP eCLIP10.85□□□□□ -0.67
PDLIM1-203ENST00000490391 PRAM1Q96QH2 718 aa10.85□□□□□ -0.67
PDLIM1-203ENST00000490391 THRAP3Q9Y2W1 955 aaKnown RBP10.85□□□□□ -0.67
PDLIM1-203ENST00000490391 TULP4Q9NRJ4 1543 aa10.84□□□□□ -0.67
PDLIM1-203ENST00000490391 NUDT7P0C024 238 aa10.84□□□□□ -0.67
PDLIM1-203ENST00000490391 ITGAEP38570 1179 aa10.84□□□□□ -0.67
PDLIM1-203ENST00000490391 GPR162Q16538 588 aa10.84□□□□□ -0.67
PDLIM1-203ENST00000490391 IFNLR1Q8IU57 520 aaPredicted RBP10.84□□□□□ -0.67
PDLIM1-203ENST00000490391 STK32BQ9NY57 414 aa10.84□□□□□ -0.67
PDLIM1-203ENST00000490391 AATKQ6ZMQ8 1374 aa10.84□□□□□ -0.67
PDLIM1-203ENST00000490391 PAPPAQ13219 1627 aa10.84□□□□□ -0.67
PDLIM1-203ENST00000490391 BCL9O00512 1426 aa10.84□□□□□ -0.67
PDLIM1-203ENST00000490391 COL5A2P05997 1499 aaPredicted RBP10.83□□□□□ -0.68
PDLIM1-203ENST00000490391 CPDO75976 1380 aa10.83□□□□□ -0.68
PDLIM1-203ENST00000490391 TXNRD1Q16881 649 aa10.83□□□□□ -0.68
PDLIM1-203ENST00000490391 C14orf93Q9H972 538 aaKnown RBP10.83□□□□□ -0.68
PDLIM1-203ENST00000490391 LHX6Q9UPM6 363 aa10.83□□□□□ -0.68
PDLIM1-203ENST00000490391 COL24A1Q17RW2 1714 aa10.82□□□□□ -0.68
PDLIM1-203ENST00000490391 EVA1CP58658 441 aa10.82□□□□□ -0.68
PDLIM1-203ENST00000490391 ADGRD1Q6QNK2 874 aa10.82□□□□□ -0.68
PDLIM1-203ENST00000490391 ATP10DQ9P241 1426 aa10.82□□□□□ -0.68
PDLIM1-203ENST00000490391 WNK3Q9BYP7 1800 aa10.8□□□□□ -0.68
PDLIM1-203ENST00000490391 RGL3Q3MIN7 710 aa10.8□□□□□ -0.68
PDLIM1-203ENST00000490391 NGDNQ8NEJ9 315 aaKnown RBP10.8□□□□□ -0.68
PDLIM1-203ENST00000490391 CRB1P82279 1406 aa10.8□□□□□ -0.68
PDLIM1-203ENST00000490391 EIF3AQ14152 1382 aaKnown RBP10.79□□□□□ -0.68
PDLIM1-203ENST00000490391 CFAP70Q5T0N1 1121 aa10.79□□□□□ -0.68
PDLIM1-203ENST00000490391 MARCH10Q8NA82 808 aaPredicted RBP10.79□□□□□ -0.68
PDLIM1-203ENST00000490391 HIRIP3Q9BW71 556 aaPredicted RBP10.79□□□□□ -0.68
PDLIM1-203ENST00000490391 USP19O94966 1318 aa10.79□□□□□ -0.68
PDLIM1-203ENST00000490391 ADCY9O60503 1353 aa10.78□□□□□ -0.68
PDLIM1-203ENST00000490391 ADGRB1O14514 1584 aa10.78□□□□□ -0.68
PDLIM1-203ENST00000490391 AKAP12Q02952 1782 aa10.78□□□□□ -0.68
PDLIM1-203ENST00000490391 YBX3P16989 372 aaKnown RBP eCLIP10.78□□□□□ -0.683e-11■□□□□ 9
PDLIM1-203ENST00000490391 DDB1Q16531 1140 aa10.78□□□□□ -0.68
PDLIM1-203ENST00000490391 NUTM2GQ5VZR2 741 aa10.78□□□□□ -0.68
PDLIM1-203ENST00000490391 NLGN2Q8NFZ4 835 aa10.78□□□□□ -0.68
PDLIM1-203ENST00000490391 ITSN1Q15811 1721 aa10.78□□□□□ -0.68
PDLIM1-203ENST00000490391 TOPAZ1Q8N9V7 1692 aa10.77□□□□□ -0.69
PDLIM1-203ENST00000490391 WASLO00401 505 aaPredicted RBP10.77□□□□□ -0.69
PDLIM1-203ENST00000490391 ARHGAP33O14559 1287 aa10.77□□□□□ -0.69
PDLIM1-203ENST00000490391 POGKQ9P215 609 aa10.77□□□□□ -0.69
PDLIM1-203ENST00000490391 KIF3CO14782 793 aa10.76□□□□□ -0.69
PDLIM1-203ENST00000490391 DNAJC5GQ8N7S2 189 aa10.76□□□□□ -0.69
PDLIM1-203ENST00000490391 RGS20O76081 388 aa10.75□□□□□ -0.69
PDLIM1-203ENST00000490391 SLC34A2O95436 690 aa10.75□□□□□ -0.69
PDLIM1-203ENST00000490391 ZNF827Q17R98 1081 aa10.75□□□□□ -0.69
PDLIM1-203ENST00000490391 COL13A1Q5TAT6 717 aaPredicted RBP10.75□□□□□ -0.69
PDLIM1-203ENST00000490391 GPBP1L1Q9HC44 474 aaPredicted RBP10.75□□□□□ -0.69
PDLIM1-203ENST00000490391 PCDHGA4Q9Y5G9 962 aa10.75□□□□□ -0.69
PDLIM1-203ENST00000490391 MINK1Q8N4C8 1332 aaPredicted RBP10.75□□□□□ -0.69
PDLIM1-203ENST00000490391 POLR3AO14802 1390 aaPredicted RBP10.75□□□□□ -0.69
PDLIM1-203ENST00000490391 QSER1Q2KHR3 1735 aa10.75□□□□□ -0.69
PDLIM1-203ENST00000490391 NHSQ6T4R5 1651 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms