RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 CCDC141Q6ZP82 1450 aa7.14□□□□□ -1.27
PTPRK-213ENST00000490332 NRKQ7Z2Y5 1582 aa7.14□□□□□ -1.27
PTPRK-213ENST00000490332 DDX17Q92841 729 aaKnown RBP7.14□□□□□ -1.27
PTPRK-213ENST00000490332 DDX27Q96GQ7 796 aaKnown RBP7.14□□□□□ -1.27
PTPRK-213ENST00000490332 PRKD2Q9BZL6 878 aa7.14□□□□□ -1.27
PTPRK-213ENST00000490332 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.14□□□□□ -1.27
PTPRK-213ENST00000490332 NUP188Q5SRE5 1749 aa7.13□□□□□ -1.27
PTPRK-213ENST00000490332 SHANK3Q9BYB0 1731 aa7.13□□□□□ -1.27
PTPRK-213ENST00000490332 DLC1Q96QB1 1528 aa7.13□□□□□ -1.27
PTPRK-213ENST00000490332 TRIM6-TRIM34B2RNG4 842 aa7.13□□□□□ -1.27
PTPRK-213ENST00000490332 TJAP1Q5JTD0 557 aa7.13□□□□□ -1.27
PTPRK-213ENST00000490332 C6orf132Q5T0Z8 1188 aa7.13□□□□□ -1.27
PTPRK-213ENST00000490332 GTF3C3Q9Y5Q9 886 aa7.13□□□□□ -1.27
PTPRK-213ENST00000490332 TRPM2O94759 1503 aa7.12□□□□□ -1.27
PTPRK-213ENST00000490332 PTPN23Q9H3S7 1636 aa7.12□□□□□ -1.27
PTPRK-213ENST00000490332 NWD2Q9ULI1 1742 aa7.11□□□□□ -1.27
PTPRK-213ENST00000490332 APLP1P51693 650 aa7.11□□□□□ -1.27
PTPRK-213ENST00000490332 MYT1Q01538 1121 aa7.11□□□□□ -1.27
PTPRK-213ENST00000490332 IDI1Q13907 227 aa7.11□□□□□ -1.27
PTPRK-213ENST00000490332 ZNF787Q6DD87 383 aa7.11□□□□□ -1.27
PTPRK-213ENST00000490332 LRCH3Q96II8 777 aa7.11□□□□□ -1.27
PTPRK-213ENST00000490332 SYT17Q9BSW7 474 aa7.11□□□□□ -1.27
PTPRK-213ENST00000490332 ZFYVE9O95405 1425 aa7.1□□□□□ -1.27
PTPRK-213ENST00000490332 MYOM1P52179 1685 aa7.1□□□□□ -1.27
PTPRK-213ENST00000490332 TMEM131LA2VDJ0 1609 aa7.1□□□□□ -1.27
PTPRK-213ENST00000490332 ZNF775Q96BV0 537 aaPredicted RBP7.1□□□□□ -1.27
PTPRK-213ENST00000490332 RYDENQ9NUL5 291 aaKnown RBP7.1□□□□□ -1.27
PTPRK-213ENST00000490332 CCDC9Q9Y3X0 531 aaKnown RBP7.1□□□□□ -1.27
PTPRK-213ENST00000490332 ADGRL3Q9HAR2 1447 aa7.1□□□□□ -1.27
PTPRK-213ENST00000490332 TONSLQ96HA7 1378 aa7.09□□□□□ -1.27
PTPRK-213ENST00000490332 PPP1R18Q6NYC8 613 aa7.09□□□□□ -1.27
PTPRK-213ENST00000490332 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.09□□□□□ -1.27
PTPRK-213ENST00000490332 SIN3AQ96ST3 1273 aa7.09□□□□□ -1.27
PTPRK-213ENST00000490332 AMOTL2Q9Y2J4 779 aa7.09□□□□□ -1.27
PTPRK-213ENST00000490332 V9GY48 417 aaPredicted RBP7.09□□□□□ -1.27
PTPRK-213ENST00000490332 NEXMIFQ5QGS0 1516 aa7.09□□□□□ -1.27
PTPRK-213ENST00000490332 GOLGB1Q14789 3259 aaKnown RBP7.09□□□□□ -1.27
PTPRK-213ENST00000490332 C1orf167Q5SNV9 1468 aa7.09□□□□□ -1.27
PTPRK-213ENST00000490332 NOS1P29475 1434 aa7.09□□□□□ -1.28
PTPRK-213ENST00000490332 NAIPQ13075 1403 aa7.09□□□□□ -1.28
PTPRK-213ENST00000490332 APBA3O96018 575 aa7.08□□□□□ -1.28
PTPRK-213ENST00000490332 YTHDC1Q96MU7 727 aaKnown RBP7.08□□□□□ -1.28
PTPRK-213ENST00000490332 FHDC1Q9C0D6 1143 aaPredicted RBP7.08□□□□□ -1.28
PTPRK-213ENST00000490332 SLC52A1Q9NWF4 448 aa7.08□□□□□ -1.28
PTPRK-213ENST00000490332 WWC3Q9ULE0 1092 aa7.08□□□□□ -1.28
PTPRK-213ENST00000490332 ADAMTS13Q76LX8 1427 aa7.08□□□□□ -1.28
PTPRK-213ENST00000490332 RIMS2Q9UQ26 1411 aa7.08□□□□□ -1.28
PTPRK-213ENST00000490332 USP32Q8NFA0 1604 aa7.08□□□□□ -1.28
PTPRK-213ENST00000490332 CASZ1Q86V15 1759 aa7.08□□□□□ -1.28
PTPRK-213ENST00000490332 ROCK1Q13464 1354 aa7.08□□□□□ -1.28
PTPRK-213ENST00000490332 MAP3K5Q99683 1374 aa7.08□□□□□ -1.28
PTPRK-213ENST00000490332 NPHP3Q7Z494 1330 aa7.07□□□□□ -1.28
PTPRK-213ENST00000490332 TSPY4P0CV99 314 aa7.07□□□□□ -1.28
PTPRK-213ENST00000490332 TSPY10P0CW01 314 aa7.07□□□□□ -1.28
PTPRK-213ENST00000490332 GPR162Q16538 588 aa7.07□□□□□ -1.28
PTPRK-213ENST00000490332 EPAS1Q99814 870 aa7.07□□□□□ -1.28
PTPRK-213ENST00000490332 GPBP1L1Q9HC44 474 aaPredicted RBP7.07□□□□□ -1.28
PTPRK-213ENST00000490332 XRN1Q8IZH2 1706 aaKnown RBP7.07□□□□□ -1.28
PTPRK-213ENST00000490332 CROCC2H7BZ55 1655 aa7.06□□□□□ -1.28
PTPRK-213ENST00000490332 ZNF644Q9H582 1327 aaPredicted RBP7.06□□□□□ -1.28
PTPRK-213ENST00000490332 CCER2I3L3R5 266 aa7.06□□□□□ -1.28
PTPRK-213ENST00000490332 PPP4CP60510 307 aa7.06□□□□□ -1.28
PTPRK-213ENST00000490332 FAM196AQ6ZSG2 479 aa7.06□□□□□ -1.28
PTPRK-213ENST00000490332 DNAJC5GQ8N7S2 189 aa7.06□□□□□ -1.28
PTPRK-213ENST00000490332 TSKSQ9UJT2 592 aa7.06□□□□□ -1.28
PTPRK-213ENST00000490332 ABCC5O15440 1437 aa7.06□□□□□ -1.28
PTPRK-213ENST00000490332 PCNTO95613 3336 aa7.06□□□□□ -1.28
PTPRK-213ENST00000490332 NALCNQ8IZF0 1738 aa7.06□□□□□ -1.28
PTPRK-213ENST00000490332 PLCH1Q4KWH8 1693 aa7.06□□□□□ -1.28
PTPRK-213ENST00000490332 ARHGEF5Q12774 1597 aa7.05□□□□□ -1.28
PTPRK-213ENST00000490332 GTPBP6O43824 516 aaPredicted RBP7.05□□□□□ -1.28
PTPRK-213ENST00000490332 TRIM37O94972 964 aa7.05□□□□□ -1.28
PTPRK-213ENST00000490332 MTRQ99707 1265 aa7.05□□□□□ -1.28
PTPRK-213ENST00000490332 ADGRL2O95490 1459 aa7.04□□□□□ -1.28
PTPRK-213ENST00000490332 MYO5BQ9ULV0 1848 aa7.04□□□□□ -1.28
PTPRK-213ENST00000490332 PTPRUQ92729 1446 aa7.04□□□□□ -1.28
PTPRK-213ENST00000490332 ATP10DQ9P241 1426 aa7.04□□□□□ -1.28
PTPRK-213ENST00000490332 JMYQ8N9B5 988 aa7.04□□□□□ -1.28
PTPRK-213ENST00000490332 ZNF516Q92618 1163 aa7.04□□□□□ -1.28
PTPRK-213ENST00000490332 IL21Q9HBE4 155 aa7.04□□□□□ -1.28
PTPRK-213ENST00000490332 PDZRN3Q9UPQ7 1066 aa7.04□□□□□ -1.28
PTPRK-213ENST00000490332 LRPPRCP42704 1394 aaKnown RBP7.04□□□□□ -1.28
PTPRK-213ENST00000490332 KANK1Q14678 1352 aa7.04□□□□□ -1.28
PTPRK-213ENST00000490332 ANP32CO43423 234 aa7.03□□□□□ -1.28
PTPRK-213ENST00000490332 MPHOSPH9Q99550 1183 aa7.03□□□□□ -1.28
PTPRK-213ENST00000490332 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.03□□□□□ -1.28
PTPRK-213ENST00000490332 RRP7BPQ9NSQ0 103 aa7.03□□□□□ -1.28
PTPRK-213ENST00000490332 PXDNQ92626 1479 aa7.03□□□□□ -1.28
PTPRK-213ENST00000490332 GCC2Q8IWJ2 1684 aa7.03□□□□□ -1.28
PTPRK-213ENST00000490332 RGPD3A6NKT7 1758 aaPredicted RBP7.03□□□□□ -1.28
PTPRK-213ENST00000490332 RGPD4Q7Z3J3 1758 aa7.03□□□□□ -1.28
PTPRK-213ENST00000490332 LMTK2Q8IWU2 1503 aa7.02□□□□□ -1.29
PTPRK-213ENST00000490332 DUOX2Q9NRD8 1548 aa7.02□□□□□ -1.29
PTPRK-213ENST00000490332 DDX10Q13206 875 aaKnown RBP7.02□□□□□ -1.29
PTPRK-213ENST00000490332 SAMD7Q7Z3H4 446 aa7.02□□□□□ -1.29
PTPRK-213ENST00000490332 KLRG1Q96E93 195 aa7.02□□□□□ -1.29
PTPRK-213ENST00000490332 ORAI2Q96SN7 254 aa7.02□□□□□ -1.29
PTPRK-213ENST00000490332 THSD7AQ9UPZ6 1657 aa7.02□□□□□ -1.29
PTPRK-213ENST00000490332 C3orf80F5H4A9 247 aa7.01□□□□□ -1.29
PTPRK-213ENST00000490332 GRIN3BO60391 1043 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms