RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 MSH6P52701 1360 aa19.55■□□□□ 0.72
BRD9-208ENST00000489816 PTPRUQ92729 1446 aa19.54■□□□□ 0.72
BRD9-208ENST00000489816 PLEKHG3A1L390 1219 aa19.54■□□□□ 0.72
BRD9-208ENST00000489816 CHMP4BQ9H444 224 aaKnown RBP19.54■□□□□ 0.72
BRD9-208ENST00000489816 EXOC6BQ9Y2D4 811 aa19.53■□□□□ 0.72
BRD9-208ENST00000489816 CEP85Q6P2H3 762 aa19.53■□□□□ 0.72
BRD9-208ENST00000489816 KCNA6P17658 529 aa19.52■□□□□ 0.72
BRD9-208ENST00000489816 USP6P35125 1406 aa19.52■□□□□ 0.72
BRD9-208ENST00000489816 RBM25P49756 843 aaKnown RBP19.52■□□□□ 0.72
BRD9-208ENST00000489816 ABTB2Q8N961 1025 aa19.52■□□□□ 0.72
BRD9-208ENST00000489816 DCTPP1Q9H773 170 aa19.52■□□□□ 0.72
BRD9-208ENST00000489816 TRAK2O60296 914 aa19.51■□□□□ 0.71
BRD9-208ENST00000489816 INTS3Q68E01 1043 aaKnown RBP19.51■□□□□ 0.71
BRD9-208ENST00000489816 SIRT1Q96EB6 747 aa19.51■□□□□ 0.71
BRD9-208ENST00000489816 FKBP5Q13451 457 aaPredicted RBP19.5■□□□□ 0.71
BRD9-208ENST00000489816 PANK2Q9BZ23 570 aa19.5■□□□□ 0.71
BRD9-208ENST00000489816 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.5■□□□□ 0.71
BRD9-208ENST00000489816 CDC45O75419 566 aa19.5■□□□□ 0.71
BRD9-208ENST00000489816 XPCQ01831 940 aaPredicted RBP19.5■□□□□ 0.71
BRD9-208ENST00000489816 ANKRD44Q8N8A2 993 aa19.5■□□□□ 0.71
BRD9-208ENST00000489816 PIK3R4Q99570 1358 aa19.49■□□□□ 0.71
BRD9-208ENST00000489816 ANO8Q9HCE9 1232 aaPredicted RBP19.49■□□□□ 0.71
BRD9-208ENST00000489816 SETD1BQ9UPS6 1966 aaKnown RBP19.48■□□□□ 0.71
BRD9-208ENST00000489816 TNPO1Q92973 898 aaKnown RBP19.48■□□□□ 0.71
BRD9-208ENST00000489816 SDSP20132 328 aa19.48■□□□□ 0.71
BRD9-208ENST00000489816 LMOD2Q6P5Q4 547 aa19.48■□□□□ 0.71
BRD9-208ENST00000489816 GAS2L2Q8NHY3 880 aa19.48■□□□□ 0.71
BRD9-208ENST00000489816 EIF2S2P20042 333 aaKnown RBP19.48■□□□□ 0.71
BRD9-208ENST00000489816 TRHP20396 242 aaPredicted RBP19.47■□□□□ 0.71
BRD9-208ENST00000489816 TECPR2O15040 1411 aa19.47■□□□□ 0.71
BRD9-208ENST00000489816 TTC22Q5TAA0 569 aa19.47■□□□□ 0.71
BRD9-208ENST00000489816 OVOS2A0A0J9YW53 1432 aa19.47■□□□□ 0.71
BRD9-208ENST00000489816 OVOS2Q6IE36 1432 aa19.47■□□□□ 0.71
BRD9-208ENST00000489816 RTL1A6NKG5 1358 aa19.46■□□□□ 0.71
BRD9-208ENST00000489816 STK31Q9BXU1 1019 aa19.46■□□□□ 0.71
BRD9-208ENST00000489816 RIMS1Q86UR5 1692 aaKnown RBP19.45■□□□□ 0.7
BRD9-208ENST00000489816 ANXA1P04083 346 aa19.45■□□□□ 0.7
BRD9-208ENST00000489816 REREQ9P2R6 1566 aa19.45■□□□□ 0.7
BRD9-208ENST00000489816 SSFA2P28290 1259 aa19.44■□□□□ 0.7
BRD9-208ENST00000489816 NOL8Q76FK4 1167 aaKnown RBP19.44■□□□□ 0.7
BRD9-208ENST00000489816 RGS12O14924 1447 aa19.44■□□□□ 0.7
BRD9-208ENST00000489816 PLEKHG1Q9ULL1 1385 aa19.44■□□□□ 0.7
BRD9-208ENST00000489816 FOXD4L5Q5VV16 416 aaPredicted RBP19.44■□□□□ 0.7
BRD9-208ENST00000489816 RPAP2Q8IXW5 612 aaPredicted RBP19.44■□□□□ 0.7
BRD9-208ENST00000489816 IL17REQ8NFR9 667 aa19.44■□□□□ 0.7
BRD9-208ENST00000489816 FOXD4L4Q8WXT5 416 aaPredicted RBP19.44■□□□□ 0.7
BRD9-208ENST00000489816 C3P01024 1663 aa19.43■□□□□ 0.7
BRD9-208ENST00000489816 K7ELQ4 463 aaPredicted RBP19.43■□□□□ 0.7
BRD9-208ENST00000489816 CRB1P82279 1406 aa19.43■□□□□ 0.7
BRD9-208ENST00000489816 ITSN1Q15811 1721 aa19.43■□□□□ 0.7
BRD9-208ENST00000489816 MON2Q7Z3U7 1717 aa19.43■□□□□ 0.7
BRD9-208ENST00000489816 PNMA6EA0A0J9YXQ4 647 aa19.42■□□□□ 0.7
BRD9-208ENST00000489816 XRCC6P12956 609 aaKnown RBP eCLIP19.42■□□□□ 0.7
BRD9-208ENST00000489816 ATP10DQ9P241 1426 aa19.42■□□□□ 0.7
BRD9-208ENST00000489816 GOLGA6L3A6NEY3 463 aa19.42■□□□□ 0.7
BRD9-208ENST00000489816 HOXC9P31274 260 aa19.42■□□□□ 0.7
BRD9-208ENST00000489816 FLIIQ13045 1269 aa19.42■□□□□ 0.7
BRD9-208ENST00000489816 CHAMP1Q96JM3 812 aa19.42■□□□□ 0.7
BRD9-208ENST00000489816 PHAXQ9H814 394 aaKnown RBP19.42■□□□□ 0.7
BRD9-208ENST00000489816 FLT4P35916 1363 aa19.42■□□□□ 0.7
BRD9-208ENST00000489816 PEAK1Q9H792 1746 aa19.42■□□□□ 0.7
BRD9-208ENST00000489816 THEMISQ8N1K5 641 aaPredicted RBP19.42■□□□□ 0.7
BRD9-208ENST00000489816 KNDC1Q76NI1 1749 aa19.41■□□□□ 0.7
BRD9-208ENST00000489816 GNAT3A8MTJ3 354 aa19.41■□□□□ 0.7
BRD9-208ENST00000489816 IL1RAPL2Q9NP60 686 aa19.41■□□□□ 0.7
BRD9-208ENST00000489816 SNX21Q969T3 373 aa19.41■□□□□ 0.7
BRD9-208ENST00000489816 TBX22Q9Y458 520 aa19.41■□□□□ 0.7
BRD9-208ENST00000489816 HAP1P54257 671 aaPredicted RBP19.4■□□□□ 0.7
BRD9-208ENST00000489816 PKP1Q13835 747 aa19.4■□□□□ 0.7
BRD9-208ENST00000489816 RILPL2Q969X0 211 aa19.4■□□□□ 0.7
BRD9-208ENST00000489816 CEP170BQ9Y4F5 1589 aaPredicted RBP19.4■□□□□ 0.7
BRD9-208ENST00000489816 UBR1Q8IWV7 1749 aa19.4■□□□□ 0.7
BRD9-208ENST00000489816 PTPRCP08575 1304 aa19.4■□□□□ 0.7
BRD9-208ENST00000489816 LRRC59Q96AG4 307 aaKnown RBP19.4■□□□□ 0.7
BRD9-208ENST00000489816 TRIM6-TRIM34B2RNG4 842 aa19.39■□□□□ 0.69
BRD9-208ENST00000489816 MAP4K4O95819 1239 aaPredicted RBP19.39■□□□□ 0.69
BRD9-208ENST00000489816 LRRFIP2Q9Y608 721 aaKnown RBP19.39■□□□□ 0.69
BRD9-208ENST00000489816 USP26Q9BXU7 913 aa19.39■□□□□ 0.69
BRD9-208ENST00000489816 LGR6Q9HBX8 967 aa19.39■□□□□ 0.69
BRD9-208ENST00000489816 KIF13AQ9H1H9 1805 aa19.39■□□□□ 0.69
BRD9-208ENST00000489816 ESCO1Q5FWF5 840 aa19.38■□□□□ 0.69
BRD9-208ENST00000489816 SBNO1A3KN83 1393 aa19.38■□□□□ 0.69
BRD9-208ENST00000489816 KCNQ3O43525 872 aa19.38■□□□□ 0.69
BRD9-208ENST00000489816 RGPD8O14715 1765 aaPredicted RBP19.38■□□□□ 0.69
BRD9-208ENST00000489816 USP31Q70CQ4 1352 aa19.38■□□□□ 0.69
BRD9-208ENST00000489816 AK9Q5TCS8 1911 aa19.38■□□□□ 0.69
BRD9-208ENST00000489816 GNAI2P04899 355 aa19.38■□□□□ 0.69
BRD9-208ENST00000489816 AKAP12Q02952 1782 aa19.37■□□□□ 0.69
BRD9-208ENST00000489816 IGSF1Q8N6C5 1336 aa19.37■□□□□ 0.69
BRD9-208ENST00000489816 TTC21AQ8NDW8 1320 aa19.37■□□□□ 0.69
BRD9-208ENST00000489816 KIAA0232Q92628 1395 aa19.37■□□□□ 0.69
BRD9-208ENST00000489816 HMMRO75330 724 aa19.37■□□□□ 0.69
BRD9-208ENST00000489816 NCLP19338 710 aaKnown RBP19.36■□□□□ 0.69
BRD9-208ENST00000489816 ZGPATQ8N5A5 531 aaKnown RBP19.36■□□□□ 0.69
BRD9-208ENST00000489816 DDIT3P35638 169 aa19.36■□□□□ 0.69
BRD9-208ENST00000489816 PDE1AP54750 535 aa19.36■□□□□ 0.69
BRD9-208ENST00000489816 HDGFL1Q5TGJ6 251 aa19.36■□□□□ 0.69
BRD9-208ENST00000489816 CCDC30Q5VVM6 783 aa19.36■□□□□ 0.69
BRD9-208ENST00000489816 CCT4P50991 539 aaKnown RBP19.35■□□□□ 0.69
BRD9-208ENST00000489816 NBPF6Q5VWK0 638 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms