RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 ZNF445P59923 1031 aa24.04■■□□□ 1.44
HMG20B-213ENST00000488973 USP26Q9BXU7 913 aa24.04■■□□□ 1.44
HMG20B-213ENST00000488973 AATKQ6ZMQ8 1374 aa24.04■■□□□ 1.44
HMG20B-213ENST00000488973 CYP2E1P05181 493 aaPredicted RBP24.04■■□□□ 1.44
HMG20B-213ENST00000488973 INTS3Q68E01 1043 aaKnown RBP24.03■■□□□ 1.44
HMG20B-213ENST00000488973 EDC4Q6P2E9 1401 aaKnown RBP24.03■■□□□ 1.44
HMG20B-213ENST00000488973 EMILIN1Q9Y6C2 1016 aa24.03■■□□□ 1.44
HMG20B-213ENST00000488973 CPSF1Q10570 1443 aaKnown RBP24.02■■□□□ 1.44
HMG20B-213ENST00000488973 TPM2P07951 284 aa24.02■■□□□ 1.44
HMG20B-213ENST00000488973 CWC22Q9HCG8 908 aaKnown RBP24.02■■□□□ 1.44
HMG20B-213ENST00000488973 ZSCAN30Q86W11 494 aa24.01■■□□□ 1.43
HMG20B-213ENST00000488973 ANKRD44Q8N8A2 993 aa24.01■■□□□ 1.43
HMG20B-213ENST00000488973 ATP10DQ9P241 1426 aa24■■□□□ 1.43
HMG20B-213ENST00000488973 SETD1AO15047 1707 aaKnown RBP24■■□□□ 1.43
HMG20B-213ENST00000488973 RPAP2Q8IXW5 612 aaPredicted RBP24■■□□□ 1.43
HMG20B-213ENST00000488973 MCTP1Q6DN14 999 aa23.99■■□□□ 1.43
HMG20B-213ENST00000488973 TNRQ92752 1358 aa23.98■■□□□ 1.43
HMG20B-213ENST00000488973 HAP1P54257 671 aaPredicted RBP23.98■■□□□ 1.43
HMG20B-213ENST00000488973 CASC1Q6TDU7 716 aa23.98■■□□□ 1.43
HMG20B-213ENST00000488973 LMBRD1Q9NUN5 540 aa23.98■■□□□ 1.43
HMG20B-213ENST00000488973 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.97■■□□□ 1.43
HMG20B-213ENST00000488973 MON2Q7Z3U7 1717 aa23.97■■□□□ 1.43
HMG20B-213ENST00000488973 C16orf71Q8IYS4 520 aaPredicted RBP23.96■■□□□ 1.43
HMG20B-213ENST00000488973 ST18O60284 1047 aa23.96■■□□□ 1.43
HMG20B-213ENST00000488973 HS1BP3Q53T59 392 aa23.96■■□□□ 1.43
HMG20B-213ENST00000488973 RGS12O14924 1447 aa23.95■■□□□ 1.43
HMG20B-213ENST00000488973 BCL11BQ9C0K0 894 aaPredicted RBP23.95■■□□□ 1.43
HMG20B-213ENST00000488973 ZSCAN23Q3MJ62 389 aa23.95■■□□□ 1.42
HMG20B-213ENST00000488973 FAM83GA6ND36 823 aa23.94■■□□□ 1.42
HMG20B-213ENST00000488973 SDSP20132 328 aa23.94■■□□□ 1.42
HMG20B-213ENST00000488973 CEP85Q6P2H3 762 aa23.94■■□□□ 1.42
HMG20B-213ENST00000488973 WAPLQ7Z5K2 1190 aa23.94■■□□□ 1.42
HMG20B-213ENST00000488973 CAVIN1Q6NZI2 390 aaKnown RBP23.94■■□□□ 1.42
HMG20B-213ENST00000488973 NME9Q86XW9 330 aa23.94■■□□□ 1.42
HMG20B-213ENST00000488973 REC8O95072 547 aa23.93■■□□□ 1.42
HMG20B-213ENST00000488973 MSNP26038 577 aaKnown RBP23.92■■□□□ 1.42
HMG20B-213ENST00000488973 NRKQ7Z2Y5 1582 aa23.92■■□□□ 1.42
HMG20B-213ENST00000488973 AKAP12Q02952 1782 aa23.92■■□□□ 1.42
HMG20B-213ENST00000488973 OFD1O75665 1012 aa23.92■■□□□ 1.42
HMG20B-213ENST00000488973 HDGFP51858 240 aaKnown RBP23.92■■□□□ 1.42
HMG20B-213ENST00000488973 RTL1A6NKG5 1358 aa23.91■■□□□ 1.42
HMG20B-213ENST00000488973 OTUD7AQ8TE49 926 aaPredicted RBP23.91■■□□□ 1.42
HMG20B-213ENST00000488973 NCLP19338 710 aaKnown RBP23.91■■□□□ 1.42
HMG20B-213ENST00000488973 PKP1Q13835 747 aa23.91■■□□□ 1.42
HMG20B-213ENST00000488973 COG3Q96JB2 828 aa23.91■■□□□ 1.42
HMG20B-213ENST00000488973 DCTN1Q14203 1278 aa23.9■■□□□ 1.42
HMG20B-213ENST00000488973 C3P01024 1663 aa23.9■■□□□ 1.42
HMG20B-213ENST00000488973 PTPRCP08575 1304 aa23.9■■□□□ 1.42
HMG20B-213ENST00000488973 KIAA0232Q92628 1395 aa23.9■■□□□ 1.42
HMG20B-213ENST00000488973 KIAA1211Q6ZU35 1233 aa23.9■■□□□ 1.42
HMG20B-213ENST00000488973 ITSN1Q15811 1721 aa23.89■■□□□ 1.42
HMG20B-213ENST00000488973 WASLO00401 505 aaPredicted RBP23.89■■□□□ 1.42
HMG20B-213ENST00000488973 PDLIM2Q96JY6 352 aa23.89■■□□□ 1.42
HMG20B-213ENST00000488973 TRHP20396 242 aaPredicted RBP23.89■■□□□ 1.41
HMG20B-213ENST00000488973 TERF1P54274 439 aa23.89■■□□□ 1.41
HMG20B-213ENST00000488973 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.89■■□□□ 1.41
HMG20B-213ENST00000488973 ZRANB1Q9UGI0 708 aa23.89■■□□□ 1.41
HMG20B-213ENST00000488973 MSH6P52701 1360 aa23.88■■□□□ 1.41
HMG20B-213ENST00000488973 CPS1P31327 1500 aa23.88■■□□□ 1.41
HMG20B-213ENST00000488973 RBSNQ9H1K0 784 aa23.88■■□□□ 1.41
HMG20B-213ENST00000488973 CHL1O00533 1208 aa23.87■■□□□ 1.41
HMG20B-213ENST00000488973 ERC2O15083 957 aa23.87■■□□□ 1.41
HMG20B-213ENST00000488973 ZGPATQ8N5A5 531 aaKnown RBP23.87■■□□□ 1.41
HMG20B-213ENST00000488973 ZDHHC9Q9Y397 364 aa23.87■■□□□ 1.41
HMG20B-213ENST00000488973 PRPF40AO75400 957 aaKnown RBP23.86■■□□□ 1.41
HMG20B-213ENST00000488973 RRS1Q15050 365 aaKnown RBP23.86■■□□□ 1.41
HMG20B-213ENST00000488973 TMEM2Q9UHN6 1383 aa23.86■■□□□ 1.41
HMG20B-213ENST00000488973 GPT2Q8TD30 523 aa23.86■■□□□ 1.41
HMG20B-213ENST00000488973 SMARCA5O60264 1052 aaPredicted RBP23.85■■□□□ 1.41
HMG20B-213ENST00000488973 OSBPL3Q9H4L5 887 aa23.85■■□□□ 1.41
HMG20B-213ENST00000488973 NOL7Q9UMY1 257 aaKnown RBP23.85■■□□□ 1.41
HMG20B-213ENST00000488973 NRXN3Q9Y4C0 1643 aa23.85■■□□□ 1.41
HMG20B-213ENST00000488973 PRIM1P49642 420 aaKnown RBP23.85■■□□□ 1.41
HMG20B-213ENST00000488973 TUBGCP6Q96RT7 1819 aa23.85■■□□□ 1.41
HMG20B-213ENST00000488973 HMMRO75330 724 aa23.83■■□□□ 1.41
HMG20B-213ENST00000488973 MEIS3Q99687 375 aa23.83■■□□□ 1.41
HMG20B-213ENST00000488973 UBR1Q8IWV7 1749 aa23.83■■□□□ 1.41
HMG20B-213ENST00000488973 TAF7LQ5H9L4 462 aa23.83■■□□□ 1.41
HMG20B-213ENST00000488973 ZNF500O60304 480 aaPredicted RBP23.82■■□□□ 1.4
HMG20B-213ENST00000488973 KRT24Q2M2I5 525 aa23.82■■□□□ 1.4
HMG20B-213ENST00000488973 LRSAM1Q6UWE0 723 aa23.82■■□□□ 1.4
HMG20B-213ENST00000488973 NUDT16Q96DE0 195 aaKnown RBP23.82■■□□□ 1.4
HMG20B-213ENST00000488973 MCM2P49736 904 aa23.81■■□□□ 1.4
HMG20B-213ENST00000488973 CCDC61Q9Y6R9 512 aa23.81■■□□□ 1.4
HMG20B-213ENST00000488973 APBB1O00213 710 aa23.8■■□□□ 1.4
HMG20B-213ENST00000488973 SIRT1Q96EB6 747 aa23.8■■□□□ 1.4
HMG20B-213ENST00000488973 MBD3O95983 291 aa23.79■■□□□ 1.4
HMG20B-213ENST00000488973 RBM27Q9P2N5 1060 aaKnown RBP23.79■■□□□ 1.4
HMG20B-213ENST00000488973 PDE1AP54750 535 aa23.79■■□□□ 1.4
HMG20B-213ENST00000488973 SULT6B1Q6IMI4 303 aa23.79■■□□□ 1.4
HMG20B-213ENST00000488973 METP08581 1390 aa23.78■■□□□ 1.4
HMG20B-213ENST00000488973 EIF4A2Q14240 407 aaKnown RBP23.78■■□□□ 1.4
HMG20B-213ENST00000488973 AEBP1Q8IUX7 1158 aa23.78■■□□□ 1.4
HMG20B-213ENST00000488973 TMEM63CQ9P1W3 806 aa23.78■■□□□ 1.4
HMG20B-213ENST00000488973 RGPD1P0DJD0 1748 aa23.78■■□□□ 1.4
HMG20B-213ENST00000488973 TECPR2O15040 1411 aa23.78■■□□□ 1.4
HMG20B-213ENST00000488973 MCM5P33992 734 aa23.78■■□□□ 1.4
HMG20B-213ENST00000488973 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.78■■□□□ 1.4
HMG20B-213ENST00000488973 TMX3Q96JJ7 454 aa23.76■■□□□ 1.39
HMG20B-213ENST00000488973 MCM10Q7L590 875 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms