RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 NUP188Q5SRE5 1749 aa9.22□□□□□ -0.93
UBR4-214ENST00000486515 FBLN1P23142 703 aa9.22□□□□□ -0.93
UBR4-214ENST00000486515 PCNTO95613 3336 aa9.22□□□□□ -0.93
UBR4-214ENST00000486515 RREB1Q92766 1687 aa9.21□□□□□ -0.93
UBR4-214ENST00000486515 CHRNA2Q15822 529 aa9.21□□□□□ -0.94
UBR4-214ENST00000486515 ABCA3Q99758 1704 aa9.21□□□□□ -0.94
UBR4-214ENST00000486515 MAPK8IP3Q9UPT6 1336 aa9.21□□□□□ -0.94
UBR4-214ENST00000486515 CPDO75976 1380 aa9.21□□□□□ -0.94
UBR4-214ENST00000486515 KIAA0232Q92628 1395 aa9.21□□□□□ -0.94
UBR4-214ENST00000486515 ALS2Q96Q42 1657 aa9.2□□□□□ -0.94
UBR4-214ENST00000486515 HSP90AB2PQ58FF8 381 aa9.2□□□□□ -0.94
UBR4-214ENST00000486515 ANKRD24Q8TF21 1146 aa9.2□□□□□ -0.94
UBR4-214ENST00000486515 STRN4Q9NRL3 753 aa9.2□□□□□ -0.94
UBR4-214ENST00000486515 NLRP2Q9NX02 1062 aa9.2□□□□□ -0.94
UBR4-214ENST00000486515 INSRP06213 1382 aa9.2□□□□□ -0.94
UBR4-214ENST00000486515 USP54Q70EL1 1684 aa9.2□□□□□ -0.94
UBR4-214ENST00000486515 CRYBG1Q9Y4K1 1723 aa9.19□□□□□ -0.94
UBR4-214ENST00000486515 TOM1L2Q6ZVM7 507 aa9.19□□□□□ -0.94
UBR4-214ENST00000486515 ARXQ96QS3 562 aa9.19□□□□□ -0.94
UBR4-214ENST00000486515 ANO8Q9HCE9 1232 aaPredicted RBP9.19□□□□□ -0.94
UBR4-214ENST00000486515 BTG4Q9NY30 223 aa9.19□□□□□ -0.94
UBR4-214ENST00000486515 MAP3K5Q99683 1374 aa9.19□□□□□ -0.94
UBR4-214ENST00000486515 SLIT3O75094 1523 aa9.18□□□□□ -0.94
UBR4-214ENST00000486515 EIF4A2Q14240 407 aaKnown RBP9.18□□□□□ -0.94
UBR4-214ENST00000486515 PIAS4Q8N2W9 510 aaPredicted RBP9.18□□□□□ -0.94
UBR4-214ENST00000486515 RAPGEF4Q8WZA2 1011 aa9.18□□□□□ -0.94
UBR4-214ENST00000486515 PHRF1Q9P1Y6 1649 aaKnown RBP9.18□□□□□ -0.94
UBR4-214ENST00000486515 FCHSD2O94868 740 aa9.17□□□□□ -0.94
UBR4-214ENST00000486515 IL13P35225 146 aa9.17□□□□□ -0.94
UBR4-214ENST00000486515 PNISRQ8TF01 805 aaKnown RBP9.17□□□□□ -0.94
UBR4-214ENST00000486515 SGIP1Q9BQI5 828 aa9.17□□□□□ -0.94
UBR4-214ENST00000486515 ADAMTS8Q9UP79 889 aa9.17□□□□□ -0.94
UBR4-214ENST00000486515 ERBB3P21860 1342 aa9.16□□□□□ -0.94
UBR4-214ENST00000486515 KIF3CO14782 793 aa9.16□□□□□ -0.94
UBR4-214ENST00000486515 GRIN3BO60391 1043 aa9.16□□□□□ -0.94
UBR4-214ENST00000486515 HMOX1P09601 288 aa9.16□□□□□ -0.94
UBR4-214ENST00000486515 HSPA1AP0DMV8 641 aaKnown RBP9.16□□□□□ -0.94
UBR4-214ENST00000486515 HSPA1BP0DMV9 641 aaKnown RBP9.16□□□□□ -0.94
UBR4-214ENST00000486515 HTRA3P83110 453 aa9.16□□□□□ -0.94
UBR4-214ENST00000486515 SULT6B1Q6IMI4 303 aa9.16□□□□□ -0.94
UBR4-214ENST00000486515 YTHDC1Q96MU7 727 aaKnown RBP9.16□□□□□ -0.94
UBR4-214ENST00000486515 MTFR1LQ9H019 292 aa9.16□□□□□ -0.94
UBR4-214ENST00000486515 LTN1O94822 1766 aa9.16□□□□□ -0.94
UBR4-214ENST00000486515 CASZ1Q86V15 1759 aa9.16□□□□□ -0.94
UBR4-214ENST00000486515 WDR17Q8IZU2 1322 aa9.15□□□□□ -0.94
UBR4-214ENST00000486515 TATP17735 454 aaPredicted RBP9.15□□□□□ -0.94
UBR4-214ENST00000486515 MLLT1Q03111 559 aaPredicted RBP9.15□□□□□ -0.94
UBR4-214ENST00000486515 CCDC184Q52MB2 194 aa9.15□□□□□ -0.94
UBR4-214ENST00000486515 RUNDC1Q96C34 613 aa9.15□□□□□ -0.94
UBR4-214ENST00000486515 EYA1Q99502 592 aa9.15□□□□□ -0.94
UBR4-214ENST00000486515 USP35Q9P2H5 1018 aa9.15□□□□□ -0.94
UBR4-214ENST00000486515 AXIN2Q9Y2T1 843 aa9.15□□□□□ -0.94
UBR4-214ENST00000486515 NFAT5O94916 1531 aa9.15□□□□□ -0.95
UBR4-214ENST00000486515 PEAK1Q9H792 1746 aa9.14□□□□□ -0.95
UBR4-214ENST00000486515 PRKAR2BP31323 418 aa9.14□□□□□ -0.95
UBR4-214ENST00000486515 HNRNPUQ00839 825 aaKnown RBP eCLIP9.14□□□□□ -0.95
UBR4-214ENST00000486515 LMOD3Q0VAK6 560 aa9.14□□□□□ -0.95
UBR4-214ENST00000486515 PLEKHO1Q53GL0 409 aaPredicted RBP9.14□□□□□ -0.95
UBR4-214ENST00000486515 CCDC146Q8IYE0 955 aa9.14□□□□□ -0.95
UBR4-214ENST00000486515 NGEFQ8N5V2 710 aa9.14□□□□□ -0.95
UBR4-214ENST00000486515 AMOTQ4VCS5 1084 aa9.13□□□□□ -0.95
UBR4-214ENST00000486515 C1orf141Q5JVX7 400 aa9.13□□□□□ -0.95
UBR4-214ENST00000486515 NBPF6Q5VWK0 638 aa9.13□□□□□ -0.95
UBR4-214ENST00000486515 KLHL34Q8N239 644 aa9.13□□□□□ -0.95
UBR4-214ENST00000486515 USHBP1Q8N6Y0 703 aa9.13□□□□□ -0.95
UBR4-214ENST00000486515 GAS2L2Q8NHY3 880 aa9.13□□□□□ -0.95
UBR4-214ENST00000486515 RTF1Q92541 710 aaKnown RBP9.13□□□□□ -0.95
UBR4-214ENST00000486515 NBPF4Q96M43 638 aa9.13□□□□□ -0.95
UBR4-214ENST00000486515 CDCA7Q9BWT1 371 aaPredicted RBP9.13□□□□□ -0.95
UBR4-214ENST00000486515 CARD10Q9BWT7 1032 aa9.13□□□□□ -0.95
UBR4-214ENST00000486515 BCL11BQ9C0K0 894 aaPredicted RBP9.13□□□□□ -0.95
UBR4-214ENST00000486515 SPG7Q9UQ90 795 aa9.13□□□□□ -0.95
UBR4-214ENST00000486515 THRAP3Q9Y2W1 955 aaKnown RBP9.13□□□□□ -0.95
UBR4-214ENST00000486515 ABCC6O95255 1503 aa9.13□□□□□ -0.95
UBR4-214ENST00000486515 IGSF1Q8N6C5 1336 aa9.12□□□□□ -0.95
UBR4-214ENST00000486515 TOMM70O94826 608 aa9.12□□□□□ -0.95
UBR4-214ENST00000486515 IL2RBP14784 551 aa9.12□□□□□ -0.95
UBR4-214ENST00000486515 NEUROD2Q15784 382 aa9.12□□□□□ -0.95
UBR4-214ENST00000486515 LARP1Q6PKG0 1096 aaKnown RBP9.12□□□□□ -0.95
UBR4-214ENST00000486515 TCP11L2Q8N4U5 519 aa9.12□□□□□ -0.95
UBR4-214ENST00000486515 MAP2P11137 1827 aaKnown RBP9.12□□□□□ -0.95
UBR4-214ENST00000486515 ADCY9O60503 1353 aa9.12□□□□□ -0.95
UBR4-214ENST00000486515 YBX3P16989 372 aaKnown RBP eCLIP9.11□□□□□ -0.95
UBR4-214ENST00000486515 CALD1Q05682 793 aaKnown RBP9.11□□□□□ -0.95
UBR4-214ENST00000486515 RSPH6AQ9H0K4 717 aa9.11□□□□□ -0.95
UBR4-214ENST00000486515 SALL2Q9Y467 1007 aaPredicted RBP9.11□□□□□ -0.95
UBR4-214ENST00000486515 CRB1P82279 1406 aa9.11□□□□□ -0.95
UBR4-214ENST00000486515 RGPD5Q99666 1765 aa9.11□□□□□ -0.95
UBR4-214ENST00000486515 SPATA31A5Q5VU36 1347 aa9.1□□□□□ -0.95
UBR4-214ENST00000486515 SPATA31A7Q8IWB4 1347 aa9.1□□□□□ -0.95
UBR4-214ENST00000486515 EXOC5O00471 708 aa9.1□□□□□ -0.95
UBR4-214ENST00000486515 APAF1O14727 1248 aa9.1□□□□□ -0.95
UBR4-214ENST00000486515 RIPK4P57078 832 aa9.1□□□□□ -0.95
UBR4-214ENST00000486515 NWD2Q9ULI1 1742 aa9.1□□□□□ -0.95
UBR4-214ENST00000486515 COL5A2P05997 1499 aaPredicted RBP9.09□□□□□ -0.95
UBR4-214ENST00000486515 HSP90AB1P08238 724 aaKnown RBP9.09□□□□□ -0.95
UBR4-214ENST00000486515 ZNF530Q6P9A1 599 aaPredicted RBP9.09□□□□□ -0.95
UBR4-214ENST00000486515 AEBP1Q8IUX7 1158 aa9.09□□□□□ -0.95
UBR4-214ENST00000486515 ZCRB1Q8TBF4 217 aaKnown RBP9.09□□□□□ -0.95
UBR4-214ENST00000486515 RGPD2P0DJD1 1756 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms