RNA–Protein interactions for RNA: ENST00000483553.5

SKIV2L-209, Transcript of Ski2 like RNA helicase, humanhuman

TSL 5

Gene SKIV2L, Length 1,307 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-209ENST00000483553 EDC4Q6P2E9 1401 aaKnown RBP22.03■■□□□ 1.12
SKIV2L-209ENST00000483553 GOLGB1Q14789 3259 aaKnown RBP22.03■■□□□ 1.12
SKIV2L-209ENST00000483553 LTN1O94822 1766 aa22.03■■□□□ 1.12
SKIV2L-209ENST00000483553 POLD1P28340 1107 aa22.03■■□□□ 1.12
SKIV2L-209ENST00000483553 AKT1S1Q96B36 256 aa22.03■■□□□ 1.12
SKIV2L-209ENST00000483553 QSER1Q2KHR3 1735 aa22.01■■□□□ 1.11
SKIV2L-209ENST00000483553 NME9Q86XW9 330 aa22■■□□□ 1.11
SKIV2L-209ENST00000483553 PANK3Q9H999 370 aa22■■□□□ 1.11
SKIV2L-209ENST00000483553 ZNF316A6NFI3 1004 aaPredicted RBP21.99■■□□□ 1.11
SKIV2L-209ENST00000483553 KLHL34Q8N239 644 aa21.99■■□□□ 1.11
SKIV2L-209ENST00000483553 CARD14Q9BXL6 1004 aa21.99■■□□□ 1.11
SKIV2L-209ENST00000483553 GIGYF1O75420 1035 aaPredicted RBP21.98■■□□□ 1.11
SKIV2L-209ENST00000483553 COL24A1Q17RW2 1714 aa21.98■■□□□ 1.11
SKIV2L-209ENST00000483553 NSD3Q9BZ95 1437 aa21.97■■□□□ 1.11
SKIV2L-209ENST00000483553 ANKRD26Q9UPS8 1709 aa21.97■■□□□ 1.11
SKIV2L-209ENST00000483553 DDX54Q8TDD1 881 aaKnown RBP21.97■■□□□ 1.11
SKIV2L-209ENST00000483553 TFCP2L1Q9NZI6 479 aa21.97■■□□□ 1.11
SKIV2L-209ENST00000483553 PNPLA7Q6ZV29 1317 aa21.96■■□□□ 1.11
SKIV2L-209ENST00000483553 PELP1Q8IZL8 1130 aaKnown RBP21.96■■□□□ 1.11
SKIV2L-209ENST00000483553 IP6K1Q92551 441 aa21.93■■□□□ 1.1
SKIV2L-209ENST00000483553 FAM208AQ9UK61 1670 aaKnown RBP21.92■■□□□ 1.1
SKIV2L-209ENST00000483553 PRIM1P49642 420 aaKnown RBP21.91■■□□□ 1.1
SKIV2L-209ENST00000483553 SYTL4Q96C24 671 aaPredicted RBP21.91■■□□□ 1.1
SKIV2L-209ENST00000483553 CEP350Q5VT06 3117 aa21.91■■□□□ 1.1
SKIV2L-209ENST00000483553 GRIN3BO60391 1043 aa21.9■■□□□ 1.1
SKIV2L-209ENST00000483553 NLGN2Q8NFZ4 835 aa21.9■■□□□ 1.1
SKIV2L-209ENST00000483553 TUBGCP6Q96RT7 1819 aa21.9■■□□□ 1.1
SKIV2L-209ENST00000483553 PER1O15534 1290 aaPredicted RBP21.89■■□□□ 1.1
SKIV2L-209ENST00000483553 LTV1Q96GA3 475 aaPredicted RBP21.89■■□□□ 1.1
SKIV2L-209ENST00000483553 LY75O60449 1722 aa21.88■■□□□ 1.09
SKIV2L-209ENST00000483553 FYB1O15117 783 aa21.88■■□□□ 1.09
SKIV2L-209ENST00000483553 KCNQ4P56696 695 aa21.88■■□□□ 1.09
SKIV2L-209ENST00000483553 DDX10Q13206 875 aaKnown RBP21.88■■□□□ 1.09
SKIV2L-209ENST00000483553 CGNL1Q0VF96 1302 aa21.88■■□□□ 1.09
SKIV2L-209ENST00000483553 IFFO2Q5TF58 517 aa21.87■■□□□ 1.09
SKIV2L-209ENST00000483553 KNSTRNQ9Y448 316 aa21.87■■□□□ 1.09
SKIV2L-209ENST00000483553 SHANK3Q9BYB0 1731 aa21.87■■□□□ 1.09
SKIV2L-209ENST00000483553 ZCRB1Q8TBF4 217 aaKnown RBP21.86■■□□□ 1.09
SKIV2L-209ENST00000483553 DOT1LQ8TEK3 1739 aa21.86■■□□□ 1.09
SKIV2L-209ENST00000483553 GGNBP2Q9H3C7 697 aa21.85■■□□□ 1.09
SKIV2L-209ENST00000483553 CCNL1Q9UK58 526 aaPredicted RBP21.85■■□□□ 1.09
SKIV2L-209ENST00000483553 MSH5O43196 834 aa21.84■■□□□ 1.09
SKIV2L-209ENST00000483553 NSD2O96028 1365 aa21.84■■□□□ 1.09
SKIV2L-209ENST00000483553 MAP2P11137 1827 aaKnown RBP21.84■■□□□ 1.09
SKIV2L-209ENST00000483553 YBX3P16989 372 aaKnown RBP eCLIP21.83■■□□□ 1.09
SKIV2L-209ENST00000483553 HMGB2P26583 209 aaKnown RBP21.83■■□□□ 1.09
SKIV2L-209ENST00000483553 AMPHP49418 695 aa21.82■■□□□ 1.08
SKIV2L-209ENST00000483553 AMER1Q5JTC6 1135 aaPredicted RBP21.82■■□□□ 1.08
SKIV2L-209ENST00000483553 COL23A1Q86Y22 540 aaPredicted RBP21.82■■□□□ 1.08
SKIV2L-209ENST00000483553 COG3Q96JB2 828 aa21.82■■□□□ 1.08
SKIV2L-209ENST00000483553 HOXC9P31274 260 aa21.81■■□□□ 1.08
SKIV2L-209ENST00000483553 MAP3K19Q56UN5 1328 aa21.81■■□□□ 1.08
SKIV2L-209ENST00000483553 NPC1L1Q9UHC9 1359 aa21.79■■□□□ 1.08
SKIV2L-209ENST00000483553 RGPD2P0DJD1 1756 aa21.78■■□□□ 1.08
SKIV2L-209ENST00000483553 CD2APQ9Y5K6 639 aa21.78■■□□□ 1.08
SKIV2L-209ENST00000483553 MEGF6O75095 1541 aa21.77■■□□□ 1.08
SKIV2L-209ENST00000483553 FLAD1Q8NFF5 587 aa21.77■■□□□ 1.07
SKIV2L-209ENST00000483553 CC2D1BQ5T0F9 858 aaKnown RBP21.76■■□□□ 1.07
SKIV2L-209ENST00000483553 MSL1Q68DK7 614 aa21.76■■□□□ 1.07
SKIV2L-209ENST00000483553 ATP10DQ9P241 1426 aa21.76■■□□□ 1.07
SKIV2L-209ENST00000483553 FBLN1P23142 703 aa21.74■■□□□ 1.07
SKIV2L-209ENST00000483553 RAPGEF4Q8WZA2 1011 aa21.74■■□□□ 1.07
SKIV2L-209ENST00000483553 GPBP1L1Q9HC44 474 aaPredicted RBP21.74■■□□□ 1.07
SKIV2L-209ENST00000483553 RTL1A6NKG5 1358 aa21.74■■□□□ 1.07
SKIV2L-209ENST00000483553 C5P01031 1676 aa21.73■■□□□ 1.07
SKIV2L-209ENST00000483553 CNGB1Q14028 1251 aaPredicted RBP21.73■■□□□ 1.07
SKIV2L-209ENST00000483553 NBPF6Q5VWK0 638 aa21.73■■□□□ 1.07
SKIV2L-209ENST00000483553 MORC1Q86VD1 984 aa21.73■■□□□ 1.07
SKIV2L-209ENST00000483553 NBPF4Q96M43 638 aa21.73■■□□□ 1.07
SKIV2L-209ENST00000483553 TATP17735 454 aaPredicted RBP21.71■■□□□ 1.07
SKIV2L-209ENST00000483553 TNNT2P45379 298 aaPredicted RBP21.7■■□□□ 1.06
SKIV2L-209ENST00000483553 SMG6Q86US8 1419 aaKnown RBP21.7■■□□□ 1.06
SKIV2L-209ENST00000483553 TAF1LQ8IZX4 1826 aa21.69■■□□□ 1.06
SKIV2L-209ENST00000483553 RRS1Q15050 365 aaKnown RBP21.69■■□□□ 1.06
SKIV2L-209ENST00000483553 PCDH11XQ9BZA7 1347 aa21.69■■□□□ 1.06
SKIV2L-209ENST00000483553 PCDH11YQ9BZA8 1340 aa21.69■■□□□ 1.06
SKIV2L-209ENST00000483553 PALLDQ8WX93 1383 aa21.68■■□□□ 1.06
SKIV2L-209ENST00000483553 HSPA6P17066 643 aa21.68■■□□□ 1.06
SKIV2L-209ENST00000483553 USHBP1Q8N6Y0 703 aa21.68■■□□□ 1.06
SKIV2L-209ENST00000483553 ADCY9O60503 1353 aa21.67■■□□□ 1.06
SKIV2L-209ENST00000483553 MPRIPQ6WCQ1 1025 aa21.66■■□□□ 1.06
SKIV2L-209ENST00000483553 SMARCC1Q92922 1105 aaPredicted RBP21.66■■□□□ 1.06
SKIV2L-209ENST00000483553 AK7Q96M32 723 aa21.65■■□□□ 1.06
SKIV2L-209ENST00000483553 ZNF526Q8TF50 670 aaPredicted RBP21.64■■□□□ 1.05
SKIV2L-209ENST00000483553 C4BP0C0L5 1744 aa21.64■■□□□ 1.05
SKIV2L-209ENST00000483553 POLKQ9UBT6 870 aa21.63■■□□□ 1.05
SKIV2L-209ENST00000483553 EMILIN1Q9Y6C2 1016 aa21.63■■□□□ 1.05
SKIV2L-209ENST00000483553 INSRP06213 1382 aa21.63■■□□□ 1.05
SKIV2L-209ENST00000483553 IGSF1Q8N6C5 1336 aa21.62■■□□□ 1.05
SKIV2L-209ENST00000483553 KIF24Q5T7B8 1368 aa21.62■■□□□ 1.05
SKIV2L-209ENST00000483553 CYP27B1O15528 508 aa21.61■■□□□ 1.05
SKIV2L-209ENST00000483553 HSP90AB2PQ58FF8 381 aa21.61■■□□□ 1.05
SKIV2L-209ENST00000483553 ITGB4P16144 1822 aa21.61■■□□□ 1.05
SKIV2L-209ENST00000483553 FLT4P35916 1363 aa21.6■■□□□ 1.05
SKIV2L-209ENST00000483553 UBR3Q6ZT12 1888 aa21.6■■□□□ 1.05
SKIV2L-209ENST00000483553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.59■■□□□ 1.05
SKIV2L-209ENST00000483553 PPM1GO15355 546 aaPredicted RBP21.59■■□□□ 1.05
SKIV2L-209ENST00000483553 PHF14O94880 888 aa21.59■■□□□ 1.05
SKIV2L-209ENST00000483553 SSFA2P28290 1259 aa21.59■■□□□ 1.05
SKIV2L-209ENST00000483553 RALBP1Q15311 655 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms