RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 K7ELQ4 463 aaPredicted RBP12.36□□□□□ -0.43
PRPF4B-206ENST00000481109 IVLP07476 585 aa12.36□□□□□ -0.43
PRPF4B-206ENST00000481109 DUSP27Q5VZP5 1158 aa12.36□□□□□ -0.43
PRPF4B-206ENST00000481109 STAG1Q8WVM7 1258 aa12.36□□□□□ -0.43
PRPF4B-206ENST00000481109 ST7Q9NRC1 585 aa12.36□□□□□ -0.43
PRPF4B-206ENST00000481109 CHIC2Q9UKJ5 165 aa12.36□□□□□ -0.43
PRPF4B-206ENST00000481109 SYCE3A1L190 88 aa12.36□□□□□ -0.43
PRPF4B-206ENST00000481109 ZBTB7CA1YPR0 619 aa12.36□□□□□ -0.43
PRPF4B-206ENST00000481109 E2F4Q16254 413 aa12.36□□□□□ -0.43
PRPF4B-206ENST00000481109 MCTP1Q6DN14 999 aa12.36□□□□□ -0.43
PRPF4B-206ENST00000481109 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.36□□□□□ -0.431e-6■■■■■ 128.5
PRPF4B-206ENST00000481109 GAPVD1Q14C86 1478 aa12.36□□□□□ -0.43
PRPF4B-206ENST00000481109 TMEM63CQ9P1W3 806 aa12.35□□□□□ -0.43
PRPF4B-206ENST00000481109 BCORL1Q5H9F3 1711 aa12.35□□□□□ -0.43
PRPF4B-206ENST00000481109 LRRIQ1Q96JM4 1722 aa12.35□□□□□ -0.43
PRPF4B-206ENST00000481109 ANKRD18BA2A2Z9 1011 aa12.35□□□□□ -0.43
PRPF4B-206ENST00000481109 KCNA4P22459 653 aa12.35□□□□□ -0.43
PRPF4B-206ENST00000481109 HDAC1Q13547 482 aaPredicted RBP12.35□□□□□ -0.43
PRPF4B-206ENST00000481109 FBXO38Q6PIJ6 1188 aa12.35□□□□□ -0.43
PRPF4B-206ENST00000481109 RRP7BPQ9NSQ0 103 aa12.35□□□□□ -0.43
PRPF4B-206ENST00000481109 PARD3Q8TEW0 1356 aa12.34□□□□□ -0.43
PRPF4B-206ENST00000481109 CLASP1Q7Z460 1538 aa12.34□□□□□ -0.43
PRPF4B-206ENST00000481109 E9PCH4 1651 aa12.34□□□□□ -0.43
PRPF4B-206ENST00000481109 SGSM2O43147 1006 aa12.34□□□□□ -0.43
PRPF4B-206ENST00000481109 TPM1P09493 284 aa12.34□□□□□ -0.43
PRPF4B-206ENST00000481109 C1QTNF12Q5T7M4 302 aa12.34□□□□□ -0.43
PRPF4B-206ENST00000481109 TATDN2Q93075 761 aa12.34□□□□□ -0.43
PRPF4B-206ENST00000481109 SPAG9O60271 1321 aaKnown RBP12.34□□□□□ -0.43
PRPF4B-206ENST00000481109 SYAP1Q96A49 352 aaPredicted RBP12.33□□□□□ -0.44
PRPF4B-206ENST00000481109 ERO1AQ96HE7 468 aa12.33□□□□□ -0.44
PRPF4B-206ENST00000481109 FAXDC2Q96IV6 333 aa12.33□□□□□ -0.44
PRPF4B-206ENST00000481109 ETAA1Q9NY74 926 aa12.33□□□□□ -0.44
PRPF4B-206ENST00000481109 FHOD1Q9Y613 1164 aa12.33□□□□□ -0.44
PRPF4B-206ENST00000481109 ATP8B1O43520 1251 aa12.33□□□□□ -0.44
PRPF4B-206ENST00000481109 SMC2O95347 1197 aa12.33□□□□□ -0.44
PRPF4B-206ENST00000481109 ADCY2Q08462 1091 aa12.33□□□□□ -0.44
PRPF4B-206ENST00000481109 L3MBTL2Q969R5 705 aa12.33□□□□□ -0.44
PRPF4B-206ENST00000481109 AK7Q96M32 723 aa12.33□□□□□ -0.44
PRPF4B-206ENST00000481109 UBXN6Q9BZV1 441 aa12.33□□□□□ -0.44
PRPF4B-206ENST00000481109 A1CFQ9NQ94 594 aaKnown RBP12.33□□□□□ -0.44
PRPF4B-206ENST00000481109 TEX14Q8IWB6 1497 aa12.33□□□□□ -0.44
PRPF4B-206ENST00000481109 EPRSP07814 1512 aaKnown RBP12.33□□□□□ -0.44
PRPF4B-206ENST00000481109 H2AFXP16104 143 aaPredicted RBP12.32□□□□□ -0.44
PRPF4B-206ENST00000481109 FMNL3Q8IVF7 1028 aa12.32□□□□□ -0.44
PRPF4B-206ENST00000481109 USP25Q9UHP3 1055 aa12.32□□□□□ -0.44
PRPF4B-206ENST00000481109 GRIN2BQ13224 1484 aa12.32□□□□□ -0.44
PRPF4B-206ENST00000481109 SCAF11Q99590 1463 aaKnown RBP12.32□□□□□ -0.44
PRPF4B-206ENST00000481109 RPS6KA5O75582 802 aa12.32□□□□□ -0.44
PRPF4B-206ENST00000481109 ADCY5O95622 1261 aa12.32□□□□□ -0.44
PRPF4B-206ENST00000481109 USP8P40818 1118 aa12.32□□□□□ -0.44
PRPF4B-206ENST00000481109 RINLQ6ZS11 566 aa12.32□□□□□ -0.44
PRPF4B-206ENST00000481109 RNF214Q8ND24 703 aa12.32□□□□□ -0.44
PRPF4B-206ENST00000481109 KIF2CQ99661 725 aa12.32□□□□□ -0.44
PRPF4B-206ENST00000481109 ANAPC4Q9UJX5 808 aa12.32□□□□□ -0.44
PRPF4B-206ENST00000481109 CORO7P57737 925 aa12.31□□□□□ -0.44
PRPF4B-206ENST00000481109 EXOC4Q96A65 974 aa12.31□□□□□ -0.44
PRPF4B-206ENST00000481109 MIEF2Q96C03 454 aa12.31□□□□□ -0.44
PRPF4B-206ENST00000481109 RBM27Q9P2N5 1060 aaKnown RBP12.31□□□□□ -0.44
PRPF4B-206ENST00000481109 PYCARDQ9ULZ3 195 aa12.31□□□□□ -0.44
PRPF4B-206ENST00000481109 ZNF521Q96K83 1311 aa12.31□□□□□ -0.44
PRPF4B-206ENST00000481109 EIF3JO75822 258 aaKnown RBP12.3□□□□□ -0.44
PRPF4B-206ENST00000481109 PLA2G4AP47712 749 aa12.3□□□□□ -0.44
PRPF4B-206ENST00000481109 MORC1Q86VD1 984 aa12.3□□□□□ -0.44
PRPF4B-206ENST00000481109 TMTC2Q8N394 836 aa12.3□□□□□ -0.44
PRPF4B-206ENST00000481109 SMARCE1Q969G3 411 aa12.3□□□□□ -0.44
PRPF4B-206ENST00000481109 TSPAN18Q96SJ8 248 aa12.3□□□□□ -0.44
PRPF4B-206ENST00000481109 KCNF1Q9H3M0 494 aa12.3□□□□□ -0.44
PRPF4B-206ENST00000481109 ZSCAN16Q9H4T2 348 aaPredicted RBP12.3□□□□□ -0.44
PRPF4B-206ENST00000481109 CWC22Q9HCG8 908 aaKnown RBP12.3□□□□□ -0.44
PRPF4B-206ENST00000481109 PDZRN3Q9UPQ7 1066 aa12.3□□□□□ -0.44
PRPF4B-206ENST00000481109 EIF3CLB5ME19 914 aaKnown RBP12.3□□□□□ -0.44
PRPF4B-206ENST00000481109 KIF2AO00139 706 aaPredicted RBP12.3□□□□□ -0.44
PRPF4B-206ENST00000481109 KLHL23Q8NBE8 558 aa12.3□□□□□ -0.44
PRPF4B-206ENST00000481109 EIF3CQ99613 913 aaKnown RBP12.3□□□□□ -0.44
PRPF4B-206ENST00000481109 SAMD9Q5K651 1589 aa12.3□□□□□ -0.44
PRPF4B-206ENST00000481109 LAMC3Q9Y6N6 1575 aa12.3□□□□□ -0.44
PRPF4B-206ENST00000481109 ACTN2P35609 894 aa12.29□□□□□ -0.44
PRPF4B-206ENST00000481109 EFCAB13Q8IY85 973 aa12.29□□□□□ -0.44
PRPF4B-206ENST00000481109 ZNF428Q96B54 188 aa12.29□□□□□ -0.44
PRPF4B-206ENST00000481109 MAGI3Q5TCQ9 1506 aa12.29□□□□□ -0.44
PRPF4B-206ENST00000481109 DENND4BO75064 1496 aaPredicted RBP12.29□□□□□ -0.44
PRPF4B-206ENST00000481109 PNMA6AP0CW24 399 aaPredicted RBP12.29□□□□□ -0.44
PRPF4B-206ENST00000481109 PAX7P23759 505 aa12.29□□□□□ -0.44
PRPF4B-206ENST00000481109 TRAF1Q13077 416 aa12.29□□□□□ -0.44
PRPF4B-206ENST00000481109 NAA30Q147X3 362 aaPredicted RBP12.29□□□□□ -0.44
PRPF4B-206ENST00000481109 ZRSR1Q15695 479 aaKnown RBP12.29□□□□□ -0.44
PRPF4B-206ENST00000481109 SUDS3Q9H7L9 328 aaPredicted RBP12.29□□□□□ -0.44
PRPF4B-206ENST00000481109 RPRD2Q5VT52 1461 aaKnown RBP12.29□□□□□ -0.44
PRPF4B-206ENST00000481109 CT47B1P0C2W7 299 aaPredicted RBP12.28□□□□□ -0.44
PRPF4B-206ENST00000481109 NBPF8Q3BBV2 869 aa12.28□□□□□ -0.44
PRPF4B-206ENST00000481109 AP1ARQ63HQ0 302 aa12.28□□□□□ -0.44
PRPF4B-206ENST00000481109 PRPF40AO75400 957 aaKnown RBP12.28□□□□□ -0.44
PRPF4B-206ENST00000481109 NUTM1Q86Y26 1132 aa12.28□□□□□ -0.44
PRPF4B-206ENST00000481109 TRMT2AQ8IZ69 625 aaKnown RBP12.28□□□□□ -0.44
PRPF4B-206ENST00000481109 PDS5BQ9NTI5 1447 aa12.28□□□□□ -0.44
PRPF4B-206ENST00000481109 CCT2P78371 535 aaKnown RBP12.27□□□□□ -0.44
PRPF4B-206ENST00000481109 CCDC186Q7Z3E2 898 aa12.27□□□□□ -0.44
PRPF4B-206ENST00000481109 GAS2L2Q8NHY3 880 aa12.27□□□□□ -0.44
PRPF4B-206ENST00000481109 DNAAF4Q8WXU2 420 aa12.27□□□□□ -0.44
PRPF4B-206ENST00000481109 GTF3C6Q969F1 213 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms