RNA–Protein interactions for RNA: ENST00000479136.5

GSDMB-209, Transcript of gasdermin B, humanhuman

TSL 1 (best)

Gene GSDMB, Length 2,209 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-209ENST00000479136 GCP02774 474 aa13.86□□□□□ -0.19
GSDMB-209ENST00000479136 HOXC9P31274 260 aa13.86□□□□□ -0.19
GSDMB-209ENST00000479136 SULT6B1Q6IMI4 303 aa13.86□□□□□ -0.19
GSDMB-209ENST00000479136 WWC1Q8IX03 1113 aa13.86□□□□□ -0.19
GSDMB-209ENST00000479136 MMP14P50281 582 aa13.85□□□□□ -0.19
GSDMB-209ENST00000479136 TMPOP42166 694 aaKnown RBP13.84□□□□□ -0.19
GSDMB-209ENST00000479136 KIF24Q5T7B8 1368 aa13.84□□□□□ -0.19
GSDMB-209ENST00000479136 PEAK1Q9H792 1746 aa13.84□□□□□ -0.19
GSDMB-209ENST00000479136 ZNF521Q96K83 1311 aa13.84□□□□□ -0.19
GSDMB-209ENST00000479136 IQSEC2Q5JU85 1478 aa13.84□□□□□ -0.19
GSDMB-209ENST00000479136 RIPK4P57078 832 aa13.84□□□□□ -0.19
GSDMB-209ENST00000479136 USP54Q70EL1 1684 aa13.84□□□□□ -0.19
GSDMB-209ENST00000479136 TCERG1O14776 1098 aaKnown RBP13.83□□□□□ -0.2
GSDMB-209ENST00000479136 CLGNO14967 610 aa13.83□□□□□ -0.2
GSDMB-209ENST00000479136 TRPM3Q9HCF6 1732 aaPredicted RBP13.83□□□□□ -0.2
GSDMB-209ENST00000479136 TNS3Q68CZ2 1445 aa13.83□□□□□ -0.2
GSDMB-209ENST00000479136 E9PSI1 815 aa13.83□□□□□ -0.2
GSDMB-209ENST00000479136 IP6K1Q92551 441 aa13.83□□□□□ -0.2
GSDMB-209ENST00000479136 RTL1A6NKG5 1358 aa13.83□□□□□ -0.2
GSDMB-209ENST00000479136 USP19O94966 1318 aa13.82□□□□□ -0.2
GSDMB-209ENST00000479136 ZC3H6P61129 1189 aaKnown RBP13.82□□□□□ -0.2
GSDMB-209ENST00000479136 IRX3P78415 501 aaPredicted RBP13.82□□□□□ -0.2
GSDMB-209ENST00000479136 AEBP1Q8IUX7 1158 aa13.82□□□□□ -0.2
GSDMB-209ENST00000479136 ARHGEF10O15013 1369 aa13.82□□□□□ -0.2
GSDMB-209ENST00000479136 MARF1Q9Y4F3 1742 aaKnown RBP13.82□□□□□ -0.2
GSDMB-209ENST00000479136 SPATA31A3Q5VYP0 1347 aa13.82□□□□□ -0.2
GSDMB-209ENST00000479136 MS4A1P11836 297 aa13.82□□□□□ -0.2
GSDMB-209ENST00000479136 SLFN5Q08AF3 891 aa13.82□□□□□ -0.2
GSDMB-209ENST00000479136 CCDC27Q2M243 656 aa13.82□□□□□ -0.2
GSDMB-209ENST00000479136 PHACTR3Q96KR7 559 aa13.82□□□□□ -0.2
GSDMB-209ENST00000479136 PXDNQ92626 1479 aa13.81□□□□□ -0.2
GSDMB-209ENST00000479136 CABLES1Q8TDN4 633 aa13.81□□□□□ -0.2
GSDMB-209ENST00000479136 GTPBP4Q9BZE4 634 aaKnown RBP13.81□□□□□ -0.2
GSDMB-209ENST00000479136 NFAT5O94916 1531 aa13.81□□□□□ -0.2
GSDMB-209ENST00000479136 NFE2L2Q16236 605 aa13.8□□□□□ -0.2
GSDMB-209ENST00000479136 ARHGEF25Q86VW2 580 aa13.8□□□□□ -0.2
GSDMB-209ENST00000479136 WDR63Q8IWG1 891 aa13.8□□□□□ -0.2
GSDMB-209ENST00000479136 PLCD3Q8N3E9 789 aa13.8□□□□□ -0.2
GSDMB-209ENST00000479136 EYA1Q99502 592 aa13.8□□□□□ -0.2
GSDMB-209ENST00000479136 RCAN3Q9UKA8 241 aa13.8□□□□□ -0.2
GSDMB-209ENST00000479136 DUSP27Q5VZP5 1158 aa13.8□□□□□ -0.2
GSDMB-209ENST00000479136 ZHX1Q9UKY1 873 aaPredicted RBP13.8□□□□□ -0.2
GSDMB-209ENST00000479136 SLIT3O75094 1523 aa13.8□□□□□ -0.2
GSDMB-209ENST00000479136 SPINK5Q9NQ38 1064 aaPredicted RBP13.79□□□□□ -0.2
GSDMB-209ENST00000479136 LETM1O95202 739 aaPredicted RBP13.79□□□□□ -0.2
GSDMB-209ENST00000479136 SOS2Q07890 1332 aaPredicted RBP13.79□□□□□ -0.2
GSDMB-209ENST00000479136 ALS2Q96Q42 1657 aa13.78□□□□□ -0.2
GSDMB-209ENST00000479136 SLC20A2Q08357 652 aa13.78□□□□□ -0.2
GSDMB-209ENST00000479136 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.78□□□□□ -0.2
GSDMB-209ENST00000479136 LTBP4Q8N2S1 1624 aa13.78□□□□□ -0.2
GSDMB-209ENST00000479136 LMOD3Q0VAK6 560 aa13.78□□□□□ -0.2
GSDMB-209ENST00000479136 ARID3AQ99856 593 aa13.78□□□□□ -0.2
GSDMB-209ENST00000479136 MYH16Q9H6N6 1097 aa13.78□□□□□ -0.2
GSDMB-209ENST00000479136 TRIM35Q9UPQ4 493 aa13.78□□□□□ -0.2
GSDMB-209ENST00000479136 IGSF1Q8N6C5 1336 aa13.77□□□□□ -0.2
GSDMB-209ENST00000479136 LTN1O94822 1766 aa13.77□□□□□ -0.2
GSDMB-209ENST00000479136 CNPY4Q8N129 248 aa13.77□□□□□ -0.21
GSDMB-209ENST00000479136 PHF23Q9BUL5 403 aaPredicted RBP13.77□□□□□ -0.21
GSDMB-209ENST00000479136 AXDND1Q5T1B0 1012 aaPredicted RBP13.76□□□□□ -0.21
GSDMB-209ENST00000479136 USHBP1Q8N6Y0 703 aa13.76□□□□□ -0.21
GSDMB-209ENST00000479136 ANKRD24Q8TF21 1146 aa13.76□□□□□ -0.21
GSDMB-209ENST00000479136 MED1Q15648 1581 aaPredicted RBP13.76□□□□□ -0.21
GSDMB-209ENST00000479136 BACH2Q9BYV9 841 aa13.76□□□□□ -0.21
GSDMB-209ENST00000479136 GOLGA6L3A6NEY3 463 aa13.75□□□□□ -0.21
GSDMB-209ENST00000479136 TRMT2AQ8IZ69 625 aaKnown RBP13.75□□□□□ -0.21
GSDMB-209ENST00000479136 PTMSP20962 102 aa13.75□□□□□ -0.21
GSDMB-209ENST00000479136 TAOK2Q9UL54 1235 aa13.75□□□□□ -0.21
GSDMB-209ENST00000479136 TOM1O60784 492 aa13.74□□□□□ -0.21
GSDMB-209ENST00000479136 CSB-PGBD3P0DP91 1061 aa13.74□□□□□ -0.21
GSDMB-209ENST00000479136 PIP4K2BP78356 416 aa13.74□□□□□ -0.21
GSDMB-209ENST00000479136 CHRNA2Q15822 529 aa13.74□□□□□ -0.21
GSDMB-209ENST00000479136 LRRC59Q96AG4 307 aaKnown RBP13.74□□□□□ -0.21
GSDMB-209ENST00000479136 ESPNB1AK53 854 aa13.74□□□□□ -0.21
GSDMB-209ENST00000479136 PTMAP06454 111 aaKnown RBP13.74□□□□□ -0.21
GSDMB-209ENST00000479136 PDE4AP27815 886 aa13.74□□□□□ -0.21
GSDMB-209ENST00000479136 NBPF6Q5VWK0 638 aa13.74□□□□□ -0.21
GSDMB-209ENST00000479136 NBPF4Q96M43 638 aa13.74□□□□□ -0.21
GSDMB-209ENST00000479136 AXIN2Q9Y2T1 843 aa13.74□□□□□ -0.21
GSDMB-209ENST00000479136 RGPD1P0DJD0 1748 aa13.73□□□□□ -0.21
GSDMB-209ENST00000479136 ZNF622Q969S3 477 aaKnown RBP eCLIP13.73□□□□□ -0.21
GSDMB-209ENST00000479136 PRDM11Q9NQV5 511 aa13.73□□□□□ -0.21
GSDMB-209ENST00000479136 KDRP35968 1356 aa13.73□□□□□ -0.21
GSDMB-209ENST00000479136 KIAA0232Q92628 1395 aa13.73□□□□□ -0.21
GSDMB-209ENST00000479136 ZSCAN20P17040 1043 aaPredicted RBP13.72□□□□□ -0.21
GSDMB-209ENST00000479136 GRIPAP1Q4V328 841 aa13.72□□□□□ -0.21
GSDMB-209ENST00000479136 GAS2L2Q8NHY3 880 aa13.72□□□□□ -0.21
GSDMB-209ENST00000479136 RTF1Q92541 710 aaKnown RBP13.72□□□□□ -0.21
GSDMB-209ENST00000479136 THUMPD2Q9BTF0 503 aaKnown RBP13.72□□□□□ -0.21
GSDMB-209ENST00000479136 IL16Q14005 1332 aa13.72□□□□□ -0.21
GSDMB-209ENST00000479136 RRP1P56182 461 aaKnown RBP13.72□□□□□ -0.21
GSDMB-209ENST00000479136 TSR2Q969E8 191 aaKnown RBP13.72□□□□□ -0.21
GSDMB-209ENST00000479136 TRIM44Q96DX7 344 aaPredicted RBP13.72□□□□□ -0.21
GSDMB-209ENST00000479136 FAM83GA6ND36 823 aa13.71□□□□□ -0.21
GSDMB-209ENST00000479136 MTHFSDQ2M296 383 aaKnown RBP13.71□□□□□ -0.21
GSDMB-209ENST00000479136 NLRP2Q9NX02 1062 aa13.71□□□□□ -0.21
GSDMB-209ENST00000479136 PHRF1Q9P1Y6 1649 aaKnown RBP13.71□□□□□ -0.21
GSDMB-209ENST00000479136 DCTN1Q14203 1278 aa13.71□□□□□ -0.22
GSDMB-209ENST00000479136 ROBO1Q9Y6N7 1651 aa13.71□□□□□ -0.22
GSDMB-209ENST00000479136 RNF123Q5XPI4 1314 aa13.7□□□□□ -0.22
GSDMB-209ENST00000479136 VGLL3A8MV65 326 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms