RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 PLEKHG1Q9ULL1 1385 aa13.5□□□□□ -0.25
VPS52-217ENST00000478934 LTV1Q96GA3 475 aaPredicted RBP13.5□□□□□ -0.25
VPS52-217ENST00000478934 EYA1Q99502 592 aa13.5□□□□□ -0.25
VPS52-217ENST00000478934 RBM25P49756 843 aaKnown RBP13.49□□□□□ -0.25
VPS52-217ENST00000478934 SLC4A10Q6U841 1118 aa13.49□□□□□ -0.25
VPS52-217ENST00000478934 PLEKHM2Q8IWE5 1019 aa13.49□□□□□ -0.25
VPS52-217ENST00000478934 EID1Q9Y6B2 187 aa13.49□□□□□ -0.25
VPS52-217ENST00000478934 KNDC1Q76NI1 1749 aa13.49□□□□□ -0.25
VPS52-217ENST00000478934 PLEKHG5O94827 1062 aa13.49□□□□□ -0.25
VPS52-217ENST00000478934 HSCBQ8IWL3 235 aa13.49□□□□□ -0.25
VPS52-217ENST00000478934 MSH6P52701 1360 aa13.48□□□□□ -0.25
VPS52-217ENST00000478934 MCM4P33991 863 aa13.48□□□□□ -0.25
VPS52-217ENST00000478934 AMPHP49418 695 aa13.48□□□□□ -0.25
VPS52-217ENST00000478934 INTS3Q68E01 1043 aaKnown RBP13.48□□□□□ -0.25
VPS52-217ENST00000478934 RIMS1Q86UR5 1692 aaKnown RBP13.48□□□□□ -0.25
VPS52-217ENST00000478934 DCTPP1Q9H773 170 aa13.48□□□□□ -0.25
VPS52-217ENST00000478934 TSPYL4Q9UJ04 414 aa13.48□□□□□ -0.25
VPS52-217ENST00000478934 CRB1P82279 1406 aa13.48□□□□□ -0.25
VPS52-217ENST00000478934 NLRP6P59044 892 aa13.47□□□□□ -0.25
VPS52-217ENST00000478934 CEP85Q6P2H3 762 aa13.47□□□□□ -0.25
VPS52-217ENST00000478934 PANK2Q9BZ23 570 aa13.47□□□□□ -0.25
VPS52-217ENST00000478934 SSH2Q76I76 1423 aa13.47□□□□□ -0.25
VPS52-217ENST00000478934 USHBP1Q8N6Y0 703 aa13.46□□□□□ -0.25
VPS52-217ENST00000478934 CHMP5Q9NZZ3 219 aa13.46□□□□□ -0.25
VPS52-217ENST00000478934 USP31Q70CQ4 1352 aa13.46□□□□□ -0.25
VPS52-217ENST00000478934 AK9Q5TCS8 1911 aa13.46□□□□□ -0.25
VPS52-217ENST00000478934 KCNA6P17658 529 aa13.46□□□□□ -0.25
VPS52-217ENST00000478934 ANKRD44Q8N8A2 993 aa13.46□□□□□ -0.25
VPS52-217ENST00000478934 ATP10DQ9P241 1426 aa13.45□□□□□ -0.26
VPS52-217ENST00000478934 CHMP4BQ9H444 224 aaKnown RBP13.45□□□□□ -0.26
VPS52-217ENST00000478934 NRKQ7Z2Y5 1582 aa13.45□□□□□ -0.26
VPS52-217ENST00000478934 C14orf37Q86TY3 774 aa13.45□□□□□ -0.26
VPS52-217ENST00000478934 RTF1Q92541 710 aaKnown RBP13.45□□□□□ -0.26
VPS52-217ENST00000478934 CEP170BQ9Y4F5 1589 aaPredicted RBP13.45□□□□□ -0.26
VPS52-217ENST00000478934 TSHZ3Q63HK5 1081 aa13.44□□□□□ -0.26
VPS52-217ENST00000478934 RTL1A6NKG5 1358 aa13.44□□□□□ -0.26
VPS52-217ENST00000478934 TRAK2O60296 914 aa13.44□□□□□ -0.26
VPS52-217ENST00000478934 HSP90AB1P08238 724 aaKnown RBP13.44□□□□□ -0.26
VPS52-217ENST00000478934 CDC45O75419 566 aa13.43□□□□□ -0.26
VPS52-217ENST00000478934 XRCC6P12956 609 aaKnown RBP eCLIP13.43□□□□□ -0.26
VPS52-217ENST00000478934 TTC22Q5TAA0 569 aa13.43□□□□□ -0.26
VPS52-217ENST00000478934 TBX22Q9Y458 520 aa13.43□□□□□ -0.26
VPS52-217ENST00000478934 RGPD8O14715 1765 aaPredicted RBP13.43□□□□□ -0.26
VPS52-217ENST00000478934 ZBTB7CA1YPR0 619 aa13.43□□□□□ -0.26
VPS52-217ENST00000478934 DDIT3P35638 169 aa13.43□□□□□ -0.26
VPS52-217ENST00000478934 TOPAZ1Q8N9V7 1692 aa13.42□□□□□ -0.26
VPS52-217ENST00000478934 KIAA0232Q92628 1395 aa13.42□□□□□ -0.26
VPS52-217ENST00000478934 HSP90AA1P07900 732 aaKnown RBP13.42□□□□□ -0.26
VPS52-217ENST00000478934 FLT4P35916 1363 aa13.42□□□□□ -0.26
VPS52-217ENST00000478934 SDSP20132 328 aa13.42□□□□□ -0.26
VPS52-217ENST00000478934 ABTB2Q8N961 1025 aa13.42□□□□□ -0.26
VPS52-217ENST00000478934 GAS2L2Q8NHY3 880 aa13.42□□□□□ -0.26
VPS52-217ENST00000478934 SNX21Q969T3 373 aa13.42□□□□□ -0.26
VPS52-217ENST00000478934 SBNO1A3KN83 1393 aa13.41□□□□□ -0.26
VPS52-217ENST00000478934 IL17REQ8NFR9 667 aa13.41□□□□□ -0.26
VPS52-217ENST00000478934 TNPO1Q92973 898 aaKnown RBP13.41□□□□□ -0.26
VPS52-217ENST00000478934 EXOC6BQ9Y2D4 811 aa13.41□□□□□ -0.26
VPS52-217ENST00000478934 IGSF1Q8N6C5 1336 aa13.41□□□□□ -0.26
VPS52-217ENST00000478934 ARHGEF10O15013 1369 aa13.41□□□□□ -0.26
VPS52-217ENST00000478934 GOLGA6L3A6NEY3 463 aa13.41□□□□□ -0.26
VPS52-217ENST00000478934 HOXC9P31274 260 aa13.41□□□□□ -0.26
VPS52-217ENST00000478934 RRAGDQ9NQL2 400 aaPredicted RBP13.41□□□□□ -0.26
VPS52-217ENST00000478934 TTC21AQ8NDW8 1320 aa13.4□□□□□ -0.26
VPS52-217ENST00000478934 RGPD1P0DJD0 1748 aa13.4□□□□□ -0.26
VPS52-217ENST00000478934 EIF5BO60841 1220 aaKnown RBP13.4□□□□□ -0.26
VPS52-217ENST00000478934 RPAP2Q8IXW5 612 aaPredicted RBP13.4□□□□□ -0.26
VPS52-217ENST00000478934 PTPRCP08575 1304 aa13.4□□□□□ -0.27
VPS52-217ENST00000478934 THEMISQ8N1K5 641 aaPredicted RBP13.39□□□□□ -0.27
VPS52-217ENST00000478934 NCOA3Q9Y6Q9 1424 aa13.39□□□□□ -0.27
VPS52-217ENST00000478934 DIP2AQ14689 1571 aa13.39□□□□□ -0.27
VPS52-217ENST00000478934 FKBP5Q13451 457 aaPredicted RBP13.39□□□□□ -0.27
VPS52-217ENST00000478934 KDRP35968 1356 aa13.38□□□□□ -0.27
VPS52-217ENST00000478934 KIF24Q5T7B8 1368 aa13.38□□□□□ -0.27
VPS52-217ENST00000478934 NALCNQ8IZF0 1738 aa13.38□□□□□ -0.27
VPS52-217ENST00000478934 PNMA6EA0A0J9YXQ4 647 aa13.38□□□□□ -0.27
VPS52-217ENST00000478934 GNAT3A8MTJ3 354 aa13.38□□□□□ -0.27
VPS52-217ENST00000478934 K7ELQ4 463 aaPredicted RBP13.38□□□□□ -0.27
VPS52-217ENST00000478934 USP26Q9BXU7 913 aa13.38□□□□□ -0.27
VPS52-217ENST00000478934 SSFA2P28290 1259 aa13.37□□□□□ -0.27
VPS52-217ENST00000478934 FLIIQ13045 1269 aa13.37□□□□□ -0.27
VPS52-217ENST00000478934 L1TD1Q5T7N2 865 aaKnown RBP13.37□□□□□ -0.27
VPS52-217ENST00000478934 PHAXQ9H814 394 aaKnown RBP13.37□□□□□ -0.27
VPS52-217ENST00000478934 PIK3C2AO00443 1686 aa13.37□□□□□ -0.27
VPS52-217ENST00000478934 XPCQ01831 940 aaPredicted RBP13.36□□□□□ -0.27
VPS52-217ENST00000478934 HAP1P54257 671 aaPredicted RBP13.36□□□□□ -0.27
VPS52-217ENST00000478934 FAM43AQ8N2R8 423 aa13.36□□□□□ -0.27
VPS52-217ENST00000478934 STK31Q9BXU1 1019 aa13.36□□□□□ -0.27
VPS52-217ENST00000478934 LGR6Q9HBX8 967 aa13.36□□□□□ -0.27
VPS52-217ENST00000478934 ARHGAP23Q9P227 1491 aa13.36□□□□□ -0.27
VPS52-217ENST00000478934 FSD2A1L4K1 749 aa13.35□□□□□ -0.27
VPS52-217ENST00000478934 KCNQ3O43525 872 aa13.35□□□□□ -0.27
VPS52-217ENST00000478934 EIF2S2P20042 333 aaKnown RBP13.35□□□□□ -0.27
VPS52-217ENST00000478934 RAB3GAP1Q15042 981 aa13.35□□□□□ -0.27
VPS52-217ENST00000478934 ANXA1P04083 346 aa13.34□□□□□ -0.27
VPS52-217ENST00000478934 GNAI2P04899 355 aa13.34□□□□□ -0.27
VPS52-217ENST00000478934 PKP1Q13835 747 aa13.34□□□□□ -0.27
VPS52-217ENST00000478934 NBPF6Q5VWK0 638 aa13.34□□□□□ -0.27
VPS52-217ENST00000478934 LRRC59Q96AG4 307 aaKnown RBP13.34□□□□□ -0.27
VPS52-217ENST00000478934 NBPF4Q96M43 638 aa13.34□□□□□ -0.27
VPS52-217ENST00000478934 SLIT1O75093 1534 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms