RNA–Protein interactions for RNA: ENST00000478061.5

RBM28-204, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-204ENST00000478061 ANP32CO43423 234 aa17.17■□□□□ 0.34
RBM28-204ENST00000478061 RGPD1P0DJD0 1748 aa17.17■□□□□ 0.34
RBM28-204ENST00000478061 NUDCQ9Y266 331 aa17.17■□□□□ 0.34
RBM28-204ENST00000478061 HMOX1P09601 288 aa17.16■□□□□ 0.34
RBM28-204ENST00000478061 DDX54Q8TDD1 881 aaKnown RBP17.15■□□□□ 0.34
RBM28-204ENST00000478061 FAM196AQ6ZSG2 479 aa17.14■□□□□ 0.33
RBM28-204ENST00000478061 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.14■□□□□ 0.336e-7■■■□□ 17.9
RBM28-204ENST00000478061 U2AF1L5P0DN76 240 aaPredicted RBP17.13■□□□□ 0.33
RBM28-204ENST00000478061 U2AF1Q01081 240 aaKnown RBP eCLIP17.13■□□□□ 0.33
RBM28-204ENST00000478061 PLEKHG2Q9H7P9 1386 aa17.13■□□□□ 0.33
RBM28-204ENST00000478061 SOCS7O14512 581 aa17.12■□□□□ 0.33
RBM28-204ENST00000478061 SPG7Q9UQ90 795 aa17.12■□□□□ 0.33
RBM28-204ENST00000478061 EP400Q96L91 3159 aa17.11■□□□□ 0.33
RBM28-204ENST00000478061 CYP27B1O15528 508 aa17.11■□□□□ 0.33
RBM28-204ENST00000478061 UPF1Q92900 1129 aaKnown RBP eCLIP17.11■□□□□ 0.33
RBM28-204ENST00000478061 RSPH6AQ9H0K4 717 aa17.11■□□□□ 0.33
RBM28-204ENST00000478061 PCDH11XQ9BZA7 1347 aa17.11■□□□□ 0.33
RBM28-204ENST00000478061 PCDH11YQ9BZA8 1340 aa17.11■□□□□ 0.33
RBM28-204ENST00000478061 BCL9O00512 1426 aa17.11■□□□□ 0.33
RBM28-204ENST00000478061 AMOTQ4VCS5 1084 aa17.1■□□□□ 0.33
RBM28-204ENST00000478061 PLEKHO1Q53GL0 409 aaPredicted RBP17.1■□□□□ 0.33
RBM28-204ENST00000478061 FCHSD2O94868 740 aa17.09■□□□□ 0.33
RBM28-204ENST00000478061 CCDC184Q52MB2 194 aa17.09■□□□□ 0.33
RBM28-204ENST00000478061 PKD1L3Q7Z443 1732 aa17.08■□□□□ 0.32
RBM28-204ENST00000478061 SHANK3Q9BYB0 1731 aa17.08■□□□□ 0.32
RBM28-204ENST00000478061 PRKAR2BP31323 418 aa17.08■□□□□ 0.32
RBM28-204ENST00000478061 TRIM37O94972 964 aa17.07■□□□□ 0.32
RBM28-204ENST00000478061 PHKG2P15735 406 aa17.07■□□□□ 0.32
RBM28-204ENST00000478061 ZNF530Q6P9A1 599 aaPredicted RBP17.07■□□□□ 0.32
RBM28-204ENST00000478061 NKX1-1Q15270 411 aaPredicted RBP17.06■□□□□ 0.32
RBM28-204ENST00000478061 DIEXFQ68CQ4 756 aaKnown RBP17.06■□□□□ 0.32
RBM28-204ENST00000478061 IFNL2Q8IZJ0 200 aa17.06■□□□□ 0.32
RBM28-204ENST00000478061 MTHFSDQ2M296 383 aaKnown RBP17.05■□□□□ 0.32
RBM28-204ENST00000478061 PTF1AQ7RTS3 328 aa17.05■□□□□ 0.32
RBM28-204ENST00000478061 CCDC125Q86Z20 511 aa17.05■□□□□ 0.32
RBM28-204ENST00000478061 ACSBG1Q96GR2 724 aa17.05■□□□□ 0.32
RBM28-204ENST00000478061 PHACTR3Q96KR7 559 aa17.05■□□□□ 0.32
RBM28-204ENST00000478061 KCNQ2O43526 872 aa17.04■□□□□ 0.32
RBM28-204ENST00000478061 WDR43Q15061 677 aaKnown RBP eCLIP17.04■□□□□ 0.32
RBM28-204ENST00000478061 C1orf141Q5JVX7 400 aa17.03■□□□□ 0.32
RBM28-204ENST00000478061 PLEKHF1Q96S99 279 aa17.03■□□□□ 0.32
RBM28-204ENST00000478061 BCL11BQ9C0K0 894 aaPredicted RBP17.03■□□□□ 0.32
RBM28-204ENST00000478061 MRS2Q9HD23 443 aa17.03■□□□□ 0.32
RBM28-204ENST00000478061 PRIM1P49642 420 aaKnown RBP17.02■□□□□ 0.32
RBM28-204ENST00000478061 ADAMTS8Q9UP79 889 aa17.02■□□□□ 0.32
RBM28-204ENST00000478061 HSP90AB1P08238 724 aaKnown RBP17.01■□□□□ 0.31
RBM28-204ENST00000478061 SF3B2Q13435 895 aaKnown RBP17.01■□□□□ 0.31
RBM28-204ENST00000478061 AKAP4Q5JQC9 854 aa17.01■□□□□ 0.31
RBM28-204ENST00000478061 GAS2L2Q8NHY3 880 aa17.01■□□□□ 0.31
RBM28-204ENST00000478061 DCAF5Q96JK2 942 aa17■□□□□ 0.31
RBM28-204ENST00000478061 PNNQ9H307 717 aaKnown RBP17■□□□□ 0.31
RBM28-204ENST00000478061 SBF2Q86WG5 1849 aa17■□□□□ 0.31
RBM28-204ENST00000478061 KDM6AO15550 1401 aaPredicted RBP16.99■□□□□ 0.31
RBM28-204ENST00000478061 APBA3O96018 575 aa16.99■□□□□ 0.31
RBM28-204ENST00000478061 MPRIPQ6WCQ1 1025 aa16.99■□□□□ 0.31
RBM28-204ENST00000478061 PNISRQ8TF01 805 aaKnown RBP16.99■□□□□ 0.31
RBM28-204ENST00000478061 SYTL4Q96C24 671 aaPredicted RBP16.99■□□□□ 0.31
RBM28-204ENST00000478061 NEFMP07197 916 aa16.98■□□□□ 0.31
RBM28-204ENST00000478061 DEFB132Q7Z7B7 95 aa16.98■□□□□ 0.31
RBM28-204ENST00000478061 NHSQ6T4R5 1651 aa16.97■□□□□ 0.31
RBM28-204ENST00000478061 KAT6BQ8WYB5 2073 aa16.97■□□□□ 0.31
RBM28-204ENST00000478061 BAG6P46379 1132 aa16.97■□□□□ 0.31
RBM28-204ENST00000478061 CCDC146Q8IYE0 955 aa16.97■□□□□ 0.31
RBM28-204ENST00000478061 MAP3K5Q99683 1374 aa16.97■□□□□ 0.31
RBM28-204ENST00000478061 MAPK8IP3Q9UPT6 1336 aa16.96■□□□□ 0.31
RBM28-204ENST00000478061 TNS1Q9HBL0 1735 aaKnown RBP16.96■□□□□ 0.31
RBM28-204ENST00000478061 GNAT3A8MTJ3 354 aa16.96■□□□□ 0.31
RBM28-204ENST00000478061 ERVV-2B6SEH9 535 aa16.96■□□□□ 0.31
RBM28-204ENST00000478061 RNMTO43148 476 aaKnown RBP16.96■□□□□ 0.31
RBM28-204ENST00000478061 LGR6Q9HBX8 967 aa16.96■□□□□ 0.31
RBM28-204ENST00000478061 DOT1LQ8TEK3 1739 aa16.96■□□□□ 0.3
RBM28-204ENST00000478061 EN1Q05925 392 aaPredicted RBP16.95■□□□□ 0.3
RBM28-204ENST00000478061 NFE2L2Q16236 605 aa16.95■□□□□ 0.3
RBM28-204ENST00000478061 PIGBQ92521 554 aa16.95■□□□□ 0.3
RBM28-204ENST00000478061 RUNDC1Q96C34 613 aa16.95■□□□□ 0.3
RBM28-204ENST00000478061 TOGARAM1Q9Y4F4 1720 aa16.95■□□□□ 0.3
RBM28-204ENST00000478061 MIER1Q8N108 512 aa16.94■□□□□ 0.3
RBM28-204ENST00000478061 IL17REQ8NFR9 667 aa16.94■□□□□ 0.3
RBM28-204ENST00000478061 CAMKK2Q96RR4 588 aa16.94■□□□□ 0.3
RBM28-204ENST00000478061 TMOD3Q9NYL9 352 aa16.94■□□□□ 0.3
RBM28-204ENST00000478061 CCER2I3L3R5 266 aa16.93■□□□□ 0.3
RBM28-204ENST00000478061 PLSCR1O15162 318 aa16.93■□□□□ 0.3
RBM28-204ENST00000478061 CABP4P57796 275 aa16.93■□□□□ 0.3
RBM28-204ENST00000478061 HTATSF1O43719 755 aaKnown RBP16.92■□□□□ 0.3
RBM28-204ENST00000478061 EZH2Q15910 746 aaKnown RBP16.92■□□□□ 0.3
RBM28-204ENST00000478061 TMPOP42166 694 aaKnown RBP16.91■□□□□ 0.3
RBM28-204ENST00000478061 NFATC2IPQ8NCF5 419 aa16.91■□□□□ 0.3
RBM28-204ENST00000478061 SLC52A2Q9HAB3 445 aa16.91■□□□□ 0.3
RBM28-204ENST00000478061 BTAF1O14981 1849 aa16.91■□□□□ 0.3
RBM28-204ENST00000478061 CEMIPQ8WUJ3 1361 aa16.9■□□□□ 0.3
RBM28-204ENST00000478061 PROM2Q8N271 834 aa16.9■□□□□ 0.3
RBM28-204ENST00000478061 RTF1Q92541 710 aaKnown RBP16.9■□□□□ 0.3
RBM28-204ENST00000478061 RRP7AQ9Y3A4 280 aaKnown RBP16.9■□□□□ 0.3
RBM28-204ENST00000478061 ADAMTS7Q9UKP4 1686 aa16.9■□□□□ 0.3
RBM28-204ENST00000478061 ITGB4P16144 1822 aa16.89■□□□□ 0.29
RBM28-204ENST00000478061 MRC1P22897 1456 aa16.89■□□□□ 0.29
RBM28-204ENST00000478061 RIPK4P57078 832 aa16.89■□□□□ 0.29
RBM28-204ENST00000478061 DCTN1Q14203 1278 aa16.89■□□□□ 0.29
RBM28-204ENST00000478061 MCM10Q7L590 875 aa16.89■□□□□ 0.29
RBM28-204ENST00000478061 FAM9BQ8IZU0 186 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms