RNA–Protein interactions for RNA: ENST00000475970.1

TRA2A-205, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 394 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-205ENST00000475970 DHX9Q08211 1270 aaKnown RBP7.53□□□□□ -1.2
TRA2A-205ENST00000475970 LINC00528Q8N1L1 170 aa7.53□□□□□ -1.2
TRA2A-205ENST00000475970 SKIP12755 728 aa7.52□□□□□ -1.21
TRA2A-205ENST00000475970 TBC1D9Q6ZT07 1266 aa7.52□□□□□ -1.21
TRA2A-205ENST00000475970 CCDC125Q86Z20 511 aa7.52□□□□□ -1.21
TRA2A-205ENST00000475970 TMPRSS4Q9NRS4 437 aa7.52□□□□□ -1.21
TRA2A-205ENST00000475970 CHIC2Q9UKJ5 165 aa7.52□□□□□ -1.21
TRA2A-205ENST00000475970 PCDHB11Q9Y5F2 797 aa7.52□□□□□ -1.21
TRA2A-205ENST00000475970 EMILIN1Q9Y6C2 1016 aa7.52□□□□□ -1.21
TRA2A-205ENST00000475970 ERBB4Q15303 1308 aa7.52□□□□□ -1.21
TRA2A-205ENST00000475970 MEIOBQ8N635 442 aa7.51□□□□□ -1.21
TRA2A-205ENST00000475970 PLPP7Q8NBV4 271 aa7.51□□□□□ -1.21
TRA2A-205ENST00000475970 NFATC2IPQ8NCF5 419 aa7.51□□□□□ -1.21
TRA2A-205ENST00000475970 TSEN34Q9BSV6 310 aaKnown RBP7.51□□□□□ -1.21
TRA2A-205ENST00000475970 CDCA7Q9BWT1 371 aaPredicted RBP7.51□□□□□ -1.21
TRA2A-205ENST00000475970 TFIP11Q9UBB9 837 aaKnown RBP7.51□□□□□ -1.21
TRA2A-205ENST00000475970 DOLKQ9UPQ8 538 aa7.51□□□□□ -1.21
TRA2A-205ENST00000475970 ZNF784Q8NCA9 323 aaPredicted RBP7.5□□□□□ -1.21
TRA2A-205ENST00000475970 PPP1R12CQ9BZL4 782 aa7.5□□□□□ -1.21
TRA2A-205ENST00000475970 PGPEP1Q9NXJ5 209 aa7.5□□□□□ -1.21
TRA2A-205ENST00000475970 PALM3A6NDB9 673 aaPredicted RBP7.49□□□□□ -1.21
TRA2A-205ENST00000475970 ATP9BO43861 1147 aa7.49□□□□□ -1.21
TRA2A-205ENST00000475970 MAP7D1Q3KQU3 841 aa7.49□□□□□ -1.21
TRA2A-205ENST00000475970 CCDC82Q8N4S0 544 aa7.49□□□□□ -1.21
TRA2A-205ENST00000475970 CCDC97Q96F63 343 aaPredicted RBP7.49□□□□□ -1.21
TRA2A-205ENST00000475970 SERPINA10Q9UK55 444 aa7.49□□□□□ -1.21
TRA2A-205ENST00000475970 USP17L5A8MUK1 530 aa7.48□□□□□ -1.21
TRA2A-205ENST00000475970 LILRA1O75019 489 aa7.48□□□□□ -1.21
TRA2A-205ENST00000475970 VSIG8P0DPA2 414 aa7.48□□□□□ -1.21
TRA2A-205ENST00000475970 OXLD1Q5BKU9 147 aa7.48□□□□□ -1.21
TRA2A-205ENST00000475970 DEPDC4Q8N2C3 294 aa7.48□□□□□ -1.21
TRA2A-205ENST00000475970 CYLDQ9NQC7 956 aa7.48□□□□□ -1.21
TRA2A-205ENST00000475970 ADD1P35611 737 aaKnown RBP7.47□□□□□ -1.21
TRA2A-205ENST00000475970 SCTRP47872 440 aa7.47□□□□□ -1.21
TRA2A-205ENST00000475970 MAFBQ9Y5Q3 323 aaPredicted RBP7.47□□□□□ -1.21
TRA2A-205ENST00000475970 USP17L3A6NCW0 530 aa7.46□□□□□ -1.22
TRA2A-205ENST00000475970 USP17L4A6NCW7 530 aa7.46□□□□□ -1.22
TRA2A-205ENST00000475970 LZTS3O60299 673 aaPredicted RBP7.46□□□□□ -1.22
TRA2A-205ENST00000475970 LMOD1P29536 600 aaPredicted RBP7.46□□□□□ -1.22
TRA2A-205ENST00000475970 ERVK-9P63128 1117 aa7.46□□□□□ -1.22
TRA2A-205ENST00000475970 USP4Q13107 963 aa7.46□□□□□ -1.22
TRA2A-205ENST00000475970 CBLBQ13191 982 aa7.46□□□□□ -1.22
TRA2A-205ENST00000475970 NCOA4Q13772 614 aa7.46□□□□□ -1.22
TRA2A-205ENST00000475970 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.46□□□□□ -1.22
TRA2A-205ENST00000475970 CC2D2BQ6DHV5 1058 aa7.46□□□□□ -1.22
TRA2A-205ENST00000475970 USP17L2Q6R6M4 530 aa7.46□□□□□ -1.22
TRA2A-205ENST00000475970 USP17L1Q7RTZ2 530 aa7.46□□□□□ -1.22
TRA2A-205ENST00000475970 ESF1Q9H501 851 aaKnown RBP7.46□□□□□ -1.22
TRA2A-205ENST00000475970 SOS2Q07890 1332 aaPredicted RBP7.46□□□□□ -1.22
TRA2A-205ENST00000475970 TTLL8A6PVC2 850 aa7.45□□□□□ -1.22
TRA2A-205ENST00000475970 PPFIA3O75145 1194 aa7.45□□□□□ -1.22
TRA2A-205ENST00000475970 MYCP01106 439 aaPredicted RBP7.45□□□□□ -1.22
TRA2A-205ENST00000475970 RFX1P22670 979 aa7.45□□□□□ -1.22
TRA2A-205ENST00000475970 EML3Q32P44 896 aa7.45□□□□□ -1.22
TRA2A-205ENST00000475970 CFAP70Q5T0N1 1121 aa7.45□□□□□ -1.22
TRA2A-205ENST00000475970 PLEKHM2Q8IWE5 1019 aa7.45□□□□□ -1.22
TRA2A-205ENST00000475970 DNMT3LQ9UJW3 386 aa7.45□□□□□ -1.22
TRA2A-205ENST00000475970 Q6ZVU0 165 aa7.44□□□□□ -1.22
TRA2A-205ENST00000475970 SIRT1Q96EB6 747 aa7.44□□□□□ -1.22
TRA2A-205ENST00000475970 ARID3AQ99856 593 aa7.44□□□□□ -1.22
TRA2A-205ENST00000475970 NOD1Q9Y239 953 aa7.44□□□□□ -1.22
TRA2A-205ENST00000475970 LORP23490 312 aaPredicted RBP7.43□□□□□ -1.22
TRA2A-205ENST00000475970 AGBL1Q96MI9 1066 aa7.43□□□□□ -1.22
TRA2A-205ENST00000475970 OSBPL3Q9H4L5 887 aa7.43□□□□□ -1.22
TRA2A-205ENST00000475970 ADH1AP07327 375 aa7.42□□□□□ -1.22
TRA2A-205ENST00000475970 MKRN1Q9UHC7 482 aaKnown RBP7.42□□□□□ -1.22
TRA2A-205ENST00000475970 FIGNL2A6NMB9 653 aa7.41□□□□□ -1.22
TRA2A-205ENST00000475970 KANK4Q5T7N3 995 aaPredicted RBP7.41□□□□□ -1.22
TRA2A-205ENST00000475970 KDF1Q8NAX2 398 aaPredicted RBP7.41□□□□□ -1.22
TRA2A-205ENST00000475970 ATP5J2-PTCD1G3V325 749 aa7.4□□□□□ -1.22
TRA2A-205ENST00000475970 GTF2IP78347 998 aa7.4□□□□□ -1.22
TRA2A-205ENST00000475970 RELBQ01201 579 aa7.4□□□□□ -1.22
TRA2A-205ENST00000475970 PTSQ03393 145 aa7.4□□□□□ -1.22
TRA2A-205ENST00000475970 CDCA8Q53HL2 280 aa7.4□□□□□ -1.22
TRA2A-205ENST00000475970 CYP2U1Q7Z449 544 aa7.4□□□□□ -1.22
TRA2A-205ENST00000475970 TRIM50Q86XT4 487 aa7.4□□□□□ -1.22
TRA2A-205ENST00000475970 VRTNQ9H8Y1 702 aa7.4□□□□□ -1.22
TRA2A-205ENST00000475970 PCDHGA11Q9Y5H2 935 aa7.4□□□□□ -1.22
TRA2A-205ENST00000475970 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.39□□□□□ -1.23
TRA2A-205ENST00000475970 SPINT1O43278 529 aa7.39□□□□□ -1.23
TRA2A-205ENST00000475970 PTGIRP43119 386 aa7.39□□□□□ -1.23
TRA2A-205ENST00000475970 ZBTB7BO15156 539 aaPredicted RBP7.38□□□□□ -1.23
TRA2A-205ENST00000475970 GNRH1P01148 92 aa7.38□□□□□ -1.23
TRA2A-205ENST00000475970 SRPK2P78362 688 aaKnown RBP7.38□□□□□ -1.23
TRA2A-205ENST00000475970 CLDN10P78369 228 aa7.38□□□□□ -1.23
TRA2A-205ENST00000475970 OGFOD1Q8N543 542 aa7.38□□□□□ -1.23
TRA2A-205ENST00000475970 ZNF395Q9H8N7 513 aaPredicted RBP7.38□□□□□ -1.23
TRA2A-205ENST00000475970 A0A1W2PRU2 124 aa7.37□□□□□ -1.23
TRA2A-205ENST00000475970 STAU1O95793 577 aaKnown RBP7.37□□□□□ -1.23
TRA2A-205ENST00000475970 RASA1P20936 1047 aa7.37□□□□□ -1.23
TRA2A-205ENST00000475970 ATP1A2P50993 1020 aa7.37□□□□□ -1.23
TRA2A-205ENST00000475970 PSME1Q06323 249 aa7.37□□□□□ -1.23
TRA2A-205ENST00000475970 POLMQ9NP87 494 aaPredicted RBP7.37□□□□□ -1.23
TRA2A-205ENST00000475970 RAB6BQ9NRW1 208 aa7.37□□□□□ -1.23
TRA2A-205ENST00000475970 DNAAF2Q9NVR5 837 aaKnown RBP7.37□□□□□ -1.23
TRA2A-205ENST00000475970 RNF225M0QZC1 329 aaPredicted RBP7.36□□□□□ -1.23
TRA2A-205ENST00000475970 CRTC2Q53ET0 693 aaPredicted RBP7.36□□□□□ -1.23
TRA2A-205ENST00000475970 LARP1Q6PKG0 1096 aaKnown RBP7.36□□□□□ -1.23
TRA2A-205ENST00000475970 LARGE2Q8N3Y3 721 aa7.36□□□□□ -1.23
TRA2A-205ENST00000475970 CCDC155Q8N6L0 562 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms