RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 RNF135Q8IUD6 432 aa10.11□□□□□ -0.79
PRKD3-208ENST00000475912 SOX11P35716 441 aa10.1□□□□□ -0.79
PRKD3-208ENST00000475912 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.1□□□□□ -0.79
PRKD3-208ENST00000475912 OSBPL3Q9H4L5 887 aa10.1□□□□□ -0.79
PRKD3-208ENST00000475912 ESF1Q9H501 851 aaKnown RBP10.1□□□□□ -0.79
PRKD3-208ENST00000475912 LCE2CQ5TA81 110 aa10.09□□□□□ -0.79
PRKD3-208ENST00000475912 RNF217Q8TC41 542 aa10.09□□□□□ -0.79
PRKD3-208ENST00000475912 CLUAP1Q96AJ1 413 aa10.09□□□□□ -0.79
PRKD3-208ENST00000475912 DOLKQ9UPQ8 538 aa10.09□□□□□ -0.79
PRKD3-208ENST00000475912 POM121CA8CG34 1229 aa10.08□□□□□ -0.8
PRKD3-208ENST00000475912 FOXD4L5Q5VV16 416 aaPredicted RBP10.08□□□□□ -0.8
PRKD3-208ENST00000475912 CYP2U1Q7Z449 544 aa10.08□□□□□ -0.8
PRKD3-208ENST00000475912 H3BM21 787 aa10.07□□□□□ -0.8
PRKD3-208ENST00000475912 MEN1O00255 615 aa10.07□□□□□ -0.8
PRKD3-208ENST00000475912 TRAK2O60296 914 aa10.07□□□□□ -0.8
PRKD3-208ENST00000475912 MYCP01106 439 aaPredicted RBP10.07□□□□□ -0.8
PRKD3-208ENST00000475912 STK17AQ9UEE5 414 aa10.07□□□□□ -0.8
PRKD3-208ENST00000475912 A0A1W2PRU2 124 aa10.06□□□□□ -0.8
PRKD3-208ENST00000475912 PIK3CDO00329 1044 aa10.06□□□□□ -0.8
PRKD3-208ENST00000475912 OXLD1Q5BKU9 147 aa10.06□□□□□ -0.8
PRKD3-208ENST00000475912 SLC16A10Q8TF71 515 aa10.06□□□□□ -0.8
PRKD3-208ENST00000475912 ALG2Q9H553 416 aa10.06□□□□□ -0.8
PRKD3-208ENST00000475912 PTSQ03393 145 aa10.05□□□□□ -0.8
PRKD3-208ENST00000475912 NPAS3Q8IXF0 933 aa10.05□□□□□ -0.8
PRKD3-208ENST00000475912 ARHGEF10LQ9HCE6 1279 aa10.05□□□□□ -0.8
PRKD3-208ENST00000475912 CHIC2Q9UKJ5 165 aa10.05□□□□□ -0.8
PRKD3-208ENST00000475912 PLPP7Q8NBV4 271 aa10.04□□□□□ -0.8
PRKD3-208ENST00000475912 RAB6BQ9NRW1 208 aa10.04□□□□□ -0.8
PRKD3-208ENST00000475912 PPFIA3O75145 1194 aa10.03□□□□□ -0.8
PRKD3-208ENST00000475912 RNF144AP50876 292 aaPredicted RBP10.03□□□□□ -0.8
PRKD3-208ENST00000475912 ADAMTS19Q8TE59 1207 aa10.03□□□□□ -0.8
PRKD3-208ENST00000475912 USP4Q13107 963 aa10.02□□□□□ -0.81
PRKD3-208ENST00000475912 CLN3Q13286 438 aa10.02□□□□□ -0.81
PRKD3-208ENST00000475912 PROSER2Q86WR7 435 aaPredicted RBP10.02□□□□□ -0.81
PRKD3-208ENST00000475912 ERBB4Q15303 1308 aa10.02□□□□□ -0.81
PRKD3-208ENST00000475912 ABCC9O60706 1549 aa10.02□□□□□ -0.81
PRKD3-208ENST00000475912 GNRH1P01148 92 aa10.01□□□□□ -0.81
PRKD3-208ENST00000475912 MAP7D1Q3KQU3 841 aa10.01□□□□□ -0.81
PRKD3-208ENST00000475912 LYSMD3Q7Z3D4 306 aa10.01□□□□□ -0.81
PRKD3-208ENST00000475912 PRICKLE2Q7Z3G6 844 aa10.01□□□□□ -0.81
PRKD3-208ENST00000475912 IRF7Q92985 503 aa10.01□□□□□ -0.81
PRKD3-208ENST00000475912 NLRP3Q96P20 1036 aa10.01□□□□□ -0.81
PRKD3-208ENST00000475912 WIPF1O43516 503 aa10□□□□□ -0.81
PRKD3-208ENST00000475912 SKIP12755 728 aa10□□□□□ -0.81
PRKD3-208ENST00000475912 INSM1Q01101 510 aaPredicted RBP10□□□□□ -0.81
PRKD3-208ENST00000475912 FNBP4Q8N3X1 1017 aaPredicted RBP10□□□□□ -0.81
PRKD3-208ENST00000475912 CCDC155Q8N6L0 562 aa10□□□□□ -0.81
PRKD3-208ENST00000475912 SLC35F4A4IF30 521 aa9.99□□□□□ -0.81
PRKD3-208ENST00000475912 STAU1O95793 577 aaKnown RBP9.99□□□□□ -0.81
PRKD3-208ENST00000475912 IL2RAP01589 272 aa9.99□□□□□ -0.81
PRKD3-208ENST00000475912 RHOQP17081 205 aa9.99□□□□□ -0.81
PRKD3-208ENST00000475912 GPC1P35052 558 aa9.99□□□□□ -0.81
PRKD3-208ENST00000475912 SLC27A3Q5K4L6 730 aa9.99□□□□□ -0.81
PRKD3-208ENST00000475912 HDGFL1Q5TGJ6 251 aa9.99□□□□□ -0.81
PRKD3-208ENST00000475912 SIRT1Q96EB6 747 aa9.99□□□□□ -0.81
PRKD3-208ENST00000475912 SENP3-EIF4A1A0A087X0R7 540 aa9.97□□□□□ -0.81
PRKD3-208ENST00000475912 GMPRP36959 345 aa9.97□□□□□ -0.81
PRKD3-208ENST00000475912 CNKSR1Q969H4 720 aa9.97□□□□□ -0.81
PRKD3-208ENST00000475912 ESYT1Q9BSJ8 1104 aa9.97□□□□□ -0.81
PRKD3-208ENST00000475912 A6NJR5 290 aa9.96□□□□□ -0.82
PRKD3-208ENST00000475912 UCN2Q96RP3 112 aa9.96□□□□□ -0.82
PRKD3-208ENST00000475912 GRIP2Q9C0E4 1043 aa9.96□□□□□ -0.82
PRKD3-208ENST00000475912 ETNK1Q9HBU6 452 aa9.96□□□□□ -0.82
PRKD3-208ENST00000475912 VSIG8P0DPA2 414 aa9.95□□□□□ -0.82
PRKD3-208ENST00000475912 POU4F2Q12837 409 aa9.95□□□□□ -0.82
PRKD3-208ENST00000475912 NFATC2IPQ8NCF5 419 aa9.95□□□□□ -0.82
PRKD3-208ENST00000475912 XAGE2Q96GT9 111 aa9.95□□□□□ -0.82
PRKD3-208ENST00000475912 USP17L5A8MUK1 530 aa9.94□□□□□ -0.82
PRKD3-208ENST00000475912 CENPCQ03188 943 aa9.94□□□□□ -0.82
PRKD3-208ENST00000475912 NCOA4Q13772 614 aa9.94□□□□□ -0.82
PRKD3-208ENST00000475912 EML3Q32P44 896 aa9.94□□□□□ -0.82
PRKD3-208ENST00000475912 ESCO1Q5FWF5 840 aa9.94□□□□□ -0.82
PRKD3-208ENST00000475912 DEPDC4Q8N2C3 294 aa9.94□□□□□ -0.82
PRKD3-208ENST00000475912 GLMNQ92990 594 aa9.94□□□□□ -0.82
PRKD3-208ENST00000475912 HRH3Q9Y5N1 445 aa9.94□□□□□ -0.82
PRKD3-208ENST00000475912 ITGA6P23229 1130 aa9.93□□□□□ -0.82
PRKD3-208ENST00000475912 TBC1D9Q6ZT07 1266 aa9.93□□□□□ -0.82
PRKD3-208ENST00000475912 SCNN1DP51172 638 aa9.92□□□□□ -0.82
PRKD3-208ENST00000475912 GDF10P55107 478 aa9.91□□□□□ -0.82
PRKD3-208ENST00000475912 NBPF10Q6P3W6 841 aaKnown RBP9.91□□□□□ -0.82
PRKD3-208ENST00000475912 NBPF15Q8N660 670 aa9.91□□□□□ -0.82
PRKD3-208ENST00000475912 ZSCAN10Q96SZ4 725 aaPredicted RBP9.91□□□□□ -0.82
PRKD3-208ENST00000475912 FHDC1Q9C0D6 1143 aaPredicted RBP9.91□□□□□ -0.82
PRKD3-208ENST00000475912 NOD1Q9Y239 953 aa9.91□□□□□ -0.82
PRKD3-208ENST00000475912 CDC14CA4D256 554 aa9.9□□□□□ -0.82
PRKD3-208ENST00000475912 SPATA31C2B4DYI2 1134 aa9.9□□□□□ -0.82
PRKD3-208ENST00000475912 LZTS3O60299 673 aaPredicted RBP9.9□□□□□ -0.82
PRKD3-208ENST00000475912 GPR161Q8N6U8 529 aaKnown RBP9.9□□□□□ -0.82
PRKD3-208ENST00000475912 PCDHGA11Q9Y5H2 935 aa9.9□□□□□ -0.82
PRKD3-208ENST00000475912 USP17L3A6NCW0 530 aa9.89□□□□□ -0.83
PRKD3-208ENST00000475912 USP17L4A6NCW7 530 aa9.89□□□□□ -0.83
PRKD3-208ENST00000475912 WASLO00401 505 aaPredicted RBP9.89□□□□□ -0.83
PRKD3-208ENST00000475912 ATP9BO43861 1147 aa9.89□□□□□ -0.83
PRKD3-208ENST00000475912 INHAP05111 366 aa9.89□□□□□ -0.83
PRKD3-208ENST00000475912 GTF2IP78347 998 aa9.89□□□□□ -0.83
PRKD3-208ENST00000475912 TLR1Q15399 786 aa9.89□□□□□ -0.83
PRKD3-208ENST00000475912 USP17L2Q6R6M4 530 aa9.89□□□□□ -0.83
PRKD3-208ENST00000475912 TAS1R3Q7RTX0 852 aa9.89□□□□□ -0.83
PRKD3-208ENST00000475912 USP17L1Q7RTZ2 530 aa9.89□□□□□ -0.83
PRKD3-208ENST00000475912 VWA5B2Q8N398 1253 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms