RNA–Protein interactions for RNA: ENST00000473820.1

PPP2R1A-208, Transcript of protein phosphatase 2 scaffold subunit Aalpha, human

TSL 2

Gene PPP2R1A, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP2R1A-208	ENST00000473820	LTV1	Q96GA3	475 aa	Predicted RBP	13.74	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	NHS	Q6T4R5	1651 aa		13.73	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	KCNQ4	P56696	695 aa		13.73	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	NME9	Q86XW9	330 aa		13.73	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	NLGN2	Q8NFZ4	835 aa		13.73	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	PNPLA7	Q6ZV29	1317 aa		13.72	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	CENPB	P07199	599 aa	Predicted RBP	13.72	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	PRIM1	P49642	420 aa	Known RBP	13.72	□□□□□ -0.21
PPP2R1A-208	ENST00000473820	BTAF1	O14981	1849 aa		13.71	□□□□□ -0.22
PPP2R1A-208	ENST00000473820		A0A1W2PP64	1363 aa		13.7	□□□□□ -0.22
PPP2R1A-208	ENST00000473820	NFAT5	O94916	1531 aa		13.69	□□□□□ -0.22
PPP2R1A-208	ENST00000473820	ABCC6	O95255	1503 aa		13.69	□□□□□ -0.22
PPP2R1A-208	ENST00000473820	CD163L1	Q9NR16	1453 aa		13.69	□□□□□ -0.22
PPP2R1A-208	ENST00000473820	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.69	□□□□□ -0.22
PPP2R1A-208	ENST00000473820	CCNL1	Q9UK58	526 aa	Predicted RBP	13.69	□□□□□ -0.22
PPP2R1A-208	ENST00000473820	USP31	Q70CQ4	1352 aa		13.69	□□□□□ -0.22
PPP2R1A-208	ENST00000473820	YBX3	P16989	372 aa	Known RBP eCLIP	13.68	□□□□□ -0.22	1e-9	■■■□□ 18
PPP2R1A-208	ENST00000473820	CEP350	Q5VT06	3117 aa		13.68	□□□□□ -0.22
PPP2R1A-208	ENST00000473820	ZCRB1	Q8TBF4	217 aa	Known RBP	13.67	□□□□□ -0.22
PPP2R1A-208	ENST00000473820	ZNF526	Q8TF50	670 aa	Predicted RBP	13.67	□□□□□ -0.22
PPP2R1A-208	ENST00000473820	IP6K1	Q92551	441 aa		13.67	□□□□□ -0.22
PPP2R1A-208	ENST00000473820	PAPPA	Q13219	1627 aa		13.67	□□□□□ -0.22
PPP2R1A-208	ENST00000473820	MSL1	Q68DK7	614 aa		13.66	□□□□□ -0.22
PPP2R1A-208	ENST00000473820	COL23A1	Q86Y22	540 aa	Predicted RBP	13.66	□□□□□ -0.22
PPP2R1A-208	ENST00000473820	ANKRD36B	Q8N2N9	1353 aa		13.66	□□□□□ -0.22
PPP2R1A-208	ENST00000473820	EDC4	Q6P2E9	1401 aa	Known RBP	13.65	□□□□□ -0.22
PPP2R1A-208	ENST00000473820	HMGB2	P26583	209 aa	Known RBP	13.65	□□□□□ -0.22
PPP2R1A-208	ENST00000473820	AMPH	P49418	695 aa		13.65	□□□□□ -0.22
PPP2R1A-208	ENST00000473820	COG3	Q96JB2	828 aa		13.64	□□□□□ -0.23
PPP2R1A-208	ENST00000473820	CARD14	Q9BXL6	1004 aa		13.64	□□□□□ -0.23
PPP2R1A-208	ENST00000473820	ATP10D	Q9P241	1426 aa		13.64	□□□□□ -0.23
PPP2R1A-208	ENST00000473820	LTN1	O94822	1766 aa		13.63	□□□□□ -0.23
PPP2R1A-208	ENST00000473820	GGNBP2	Q9H3C7	697 aa		13.63	□□□□□ -0.23
PPP2R1A-208	ENST00000473820	CD2AP	Q9Y5K6	639 aa		13.63	□□□□□ -0.23
PPP2R1A-208	ENST00000473820	FYB1	O15117	783 aa		13.62	□□□□□ -0.23
PPP2R1A-208	ENST00000473820	HSPA6	P17066	643 aa		13.62	□□□□□ -0.23
PPP2R1A-208	ENST00000473820	FLAD1	Q8NFF5	587 aa		13.62	□□□□□ -0.23
PPP2R1A-208	ENST00000473820	PANK3	Q9H999	370 aa		13.61	□□□□□ -0.23
PPP2R1A-208	ENST00000473820	SHANK3	Q9BYB0	1731 aa		13.61	□□□□□ -0.23
PPP2R1A-208	ENST00000473820	FBLN1	P23142	703 aa		13.6	□□□□□ -0.23
PPP2R1A-208	ENST00000473820	QSER1	Q2KHR3	1735 aa		13.6	□□□□□ -0.23
PPP2R1A-208	ENST00000473820	MIER1	Q8N108	512 aa		13.6	□□□□□ -0.23
PPP2R1A-208	ENST00000473820	RAPGEF4	Q8WZA2	1011 aa		13.6	□□□□□ -0.23
PPP2R1A-208	ENST00000473820	WWC3	Q9ULE0	1092 aa		13.6	□□□□□ -0.23
PPP2R1A-208	ENST00000473820	KIF7	Q2M1P5	1343 aa		13.6	□□□□□ -0.23
PPP2R1A-208	ENST00000473820	MON2	Q7Z3U7	1717 aa		13.59	□□□□□ -0.23
PPP2R1A-208	ENST00000473820	HOXC9	P31274	260 aa		13.59	□□□□□ -0.23
PPP2R1A-208	ENST00000473820	MPRIP	Q6WCQ1	1025 aa		13.59	□□□□□ -0.23
PPP2R1A-208	ENST00000473820	NSD3	Q9BZ95	1437 aa		13.58	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	MAP3K19	Q56UN5	1328 aa		13.58	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	TAT	P17735	454 aa	Predicted RBP	13.57	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	AK7	Q96M32	723 aa		13.57	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	CGNL1	Q0VF96	1302 aa		13.57	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	NSD2	O96028	1365 aa		13.57	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	NBPF6	Q5VWK0	638 aa		13.56	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	USHBP1	Q8N6Y0	703 aa		13.56	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	NBPF4	Q96M43	638 aa		13.56	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	COL24A1	Q17RW2	1714 aa		13.56	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	TUBGCP6	Q96RT7	1819 aa		13.55	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	PHF14	O94880	888 aa		13.55	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	RRS1	Q15050	365 aa	Known RBP	13.55	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	KNSTRN	Q9Y448	316 aa		13.55	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	LY75	O60449	1722 aa		13.54	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	DOT1L	Q8TEK3	1739 aa		13.54	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	TNNT2	P45379	298 aa	Predicted RBP	13.54	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	SMARCC1	Q92922	1105 aa	Predicted RBP	13.54	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	WASHC2A	Q641Q2	1341 aa		13.54	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	IGSF1	Q8N6C5	1336 aa		13.54	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	PALLD	Q8WX93	1383 aa		13.53	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	SMG6	Q86US8	1419 aa	Known RBP	13.53	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	USP54	Q70EL1	1684 aa		13.53	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	FAM208A	Q9UK61	1670 aa	Known RBP	13.53	□□□□□ -0.24
PPP2R1A-208	ENST00000473820	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.52	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	PPM1G	O15355	546 aa	Predicted RBP	13.52	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	PCDH11X	Q9BZA7	1347 aa		13.52	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	PCDH11Y	Q9BZA8	1340 aa		13.52	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	MEGF6	O75095	1541 aa		13.52	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	APLP1	P51693	650 aa		13.51	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	CNGB1	Q14028	1251 aa	Predicted RBP	13.51	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	SMIM5	Q71RC9	77 aa		13.5	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	MORC1	Q86VD1	984 aa		13.5	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	ADCY9	O60503	1353 aa		13.49	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	KIF3C	O14782	793 aa		13.49	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	HSP90AB2P	Q58FF8	381 aa		13.49	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	EMILIN1	Q9Y6C2	1016 aa		13.49	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	RGPD2	P0DJD1	1756 aa		13.49	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	TOMM70	O94826	608 aa		13.48	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	ARHGAP27	Q6ZUM4	889 aa		13.48	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	RTL1	A6NKG5	1358 aa		13.47	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	C5	P01031	1676 aa		13.47	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	CCER2	I3L3R5	266 aa		13.47	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	GNPAT	O15228	680 aa		13.47	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	CYP27B1	O15528	508 aa		13.47	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	PER1	O15534	1290 aa	Predicted RBP	13.47	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	SSFA2	P28290	1259 aa		13.47	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	AMIGO3	Q86WK7	504 aa		13.47	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	PIGB	Q92521	554 aa		13.47	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	BCS1L	Q9Y276	419 aa		13.47	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	LOC102724428	A0A0B4J2F2	783 aa		13.46	□□□□□ -0.25
PPP2R1A-208	ENST00000473820	ATP6V1A	P38606	617 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms