RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 THEMISQ8N1K5 641 aaPredicted RBP6.32□□□□□ -1.4
LRCH3-213ENST00000471667 A2ML1A8K2U0 1454 aa6.32□□□□□ -1.4
LRCH3-213ENST00000471667 NPHP4O75161 1426 aaPredicted RBP6.32□□□□□ -1.4
LRCH3-213ENST00000471667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.31□□□□□ -1.4
LRCH3-213ENST00000471667 MOXD2PA6NHM9 499 aa6.31□□□□□ -1.4
LRCH3-213ENST00000471667 ZMYND10O75800 440 aa6.31□□□□□ -1.4
LRCH3-213ENST00000471667 CCNYL3P0C7X3 344 aa6.31□□□□□ -1.4
LRCH3-213ENST00000471667 NDUFV2P19404 249 aa6.31□□□□□ -1.4
LRCH3-213ENST00000471667 RBM6P78332 1123 aaKnown RBP6.31□□□□□ -1.4
LRCH3-213ENST00000471667 AMHR2Q16671 573 aa6.31□□□□□ -1.4
LRCH3-213ENST00000471667 EHBP1Q8NDI1 1231 aa6.31□□□□□ -1.4
LRCH3-213ENST00000471667 TRIM47Q96LD4 638 aa6.31□□□□□ -1.4
LRCH3-213ENST00000471667 SENP2Q9HC62 589 aa6.31□□□□□ -1.4
LRCH3-213ENST00000471667 VWDEQ8N2E2 1590 aa6.31□□□□□ -1.4
LRCH3-213ENST00000471667 MROH2AA6NES4 1674 aa6.3□□□□□ -1.4
LRCH3-213ENST00000471667 LRRC9Q6ZRR7 1453 aa6.3□□□□□ -1.4
LRCH3-213ENST00000471667 RAPGEF6Q8TEU7 1601 aa6.3□□□□□ -1.4
LRCH3-213ENST00000471667 SIAH2O43255 324 aa6.3□□□□□ -1.4
LRCH3-213ENST00000471667 NFX1Q12986 1120 aaKnown RBP6.3□□□□□ -1.4
LRCH3-213ENST00000471667 SF3B2Q13435 895 aaKnown RBP6.3□□□□□ -1.4
LRCH3-213ENST00000471667 PTPRNQ16849 979 aa6.3□□□□□ -1.4
LRCH3-213ENST00000471667 LRP5O75197 1615 aa6.29□□□□□ -1.4
LRCH3-213ENST00000471667 POLR1AO95602 1720 aaPredicted RBP6.29□□□□□ -1.4
LRCH3-213ENST00000471667 SH3BP2P78314 561 aa6.29□□□□□ -1.4
LRCH3-213ENST00000471667 GIGYF2Q6Y7W6 1299 aaKnown RBP6.29□□□□□ -1.4
LRCH3-213ENST00000471667 ZC3H15Q8WU90 426 aaKnown RBP6.29□□□□□ -1.4
LRCH3-213ENST00000471667 PLCH2O75038 1416 aa6.28□□□□□ -1.4
LRCH3-213ENST00000471667 FGD6Q6ZV73 1430 aa6.28□□□□□ -1.4
LRCH3-213ENST00000471667 PRR7Q8TB68 274 aa6.28□□□□□ -1.4
LRCH3-213ENST00000471667 KIFC2Q96AC6 838 aa6.28□□□□□ -1.4
LRCH3-213ENST00000471667 BEGAINQ9BUH8 593 aa6.28□□□□□ -1.4
LRCH3-213ENST00000471667 UNC93B1Q9H1C4 597 aa6.28□□□□□ -1.4
LRCH3-213ENST00000471667 EVA1BQ9NVM1 165 aa6.28□□□□□ -1.4
LRCH3-213ENST00000471667 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.28□□□□□ -1.4
LRCH3-213ENST00000471667 DIP2CQ9Y2E4 1556 aa6.27□□□□□ -1.41
LRCH3-213ENST00000471667 RGS12O14924 1447 aa6.27□□□□□ -1.41
LRCH3-213ENST00000471667 KDM5DQ9BY66 1539 aa6.27□□□□□ -1.41
LRCH3-213ENST00000471667 FAM135AQ9P2D6 1515 aa6.27□□□□□ -1.41
LRCH3-213ENST00000471667 SPDYE5A6NIY4 337 aa6.27□□□□□ -1.41
LRCH3-213ENST00000471667 MTMR2Q13614 643 aa6.27□□□□□ -1.41
LRCH3-213ENST00000471667 LINC01559Q495D7 138 aa6.27□□□□□ -1.41
LRCH3-213ENST00000471667 AFAP1Q8N556 730 aa6.27□□□□□ -1.41
LRCH3-213ENST00000471667 WASF2Q9Y6W5 498 aa6.27□□□□□ -1.41
LRCH3-213ENST00000471667 AFF2P51816 1311 aa6.26□□□□□ -1.41
LRCH3-213ENST00000471667 KCNH2Q12809 1159 aa6.26□□□□□ -1.41
LRCH3-213ENST00000471667 DESI1Q6ICB0 168 aa6.26□□□□□ -1.41
LRCH3-213ENST00000471667 BAP1Q92560 729 aa6.26□□□□□ -1.41
LRCH3-213ENST00000471667 TBC1D2Q9BYX2 928 aa6.26□□□□□ -1.41
LRCH3-213ENST00000471667 QTRT2Q9H974 415 aaKnown RBP6.26□□□□□ -1.41
LRCH3-213ENST00000471667 MED14O60244 1454 aa6.26□□□□□ -1.41
LRCH3-213ENST00000471667 NEURL4Q96JN8 1562 aa6.26□□□□□ -1.41
LRCH3-213ENST00000471667 DNMT1P26358 1616 aaKnown RBP6.25□□□□□ -1.41
LRCH3-213ENST00000471667 TERTO14746 1132 aaKnown RBP6.25□□□□□ -1.41
LRCH3-213ENST00000471667 GJA5P36382 358 aa6.25□□□□□ -1.41
LRCH3-213ENST00000471667 C1QTNF8P60827 252 aa6.25□□□□□ -1.41
LRCH3-213ENST00000471667 MLH3Q9UHC1 1453 aa6.25□□□□□ -1.41
LRCH3-213ENST00000471667 ROBO1Q9Y6N7 1651 aa6.24□□□□□ -1.41
LRCH3-213ENST00000471667 KDM5CP41229 1560 aa6.24□□□□□ -1.41
LRCH3-213ENST00000471667 CAPN5O15484 640 aaPredicted RBP6.24□□□□□ -1.41
LRCH3-213ENST00000471667 WIPF1O43516 503 aa6.24□□□□□ -1.41
LRCH3-213ENST00000471667 BMP1P13497 986 aa6.24□□□□□ -1.41
LRCH3-213ENST00000471667 DIXDC1Q155Q3 683 aa6.24□□□□□ -1.41
LRCH3-213ENST00000471667 LCE2CQ5TA81 110 aa6.24□□□□□ -1.41
LRCH3-213ENST00000471667 RSBN1LQ6PCB5 846 aaPredicted RBP6.24□□□□□ -1.41
LRCH3-213ENST00000471667 PARP9Q8IXQ6 854 aa6.24□□□□□ -1.41
LRCH3-213ENST00000471667 ZNF511Q8NB15 262 aa6.24□□□□□ -1.41
LRCH3-213ENST00000471667 TLL2Q9Y6L7 1015 aa6.24□□□□□ -1.41
LRCH3-213ENST00000471667 TNRQ92752 1358 aa6.23□□□□□ -1.41
LRCH3-213ENST00000471667 TRIM66O15016 1216 aa6.23□□□□□ -1.41
LRCH3-213ENST00000471667 VARSP26640 1264 aaKnown RBP6.23□□□□□ -1.41
LRCH3-213ENST00000471667 GGT6Q6P531 493 aa6.23□□□□□ -1.41
LRCH3-213ENST00000471667 LYPD8Q6UX82 237 aa6.23□□□□□ -1.41
LRCH3-213ENST00000471667 TRIM46Q7Z4K8 759 aa6.23□□□□□ -1.41
LRCH3-213ENST00000471667 PCDHB15Q9Y5E8 787 aa6.23□□□□□ -1.41
LRCH3-213ENST00000471667 DEPDC5O75140 1603 aa6.23□□□□□ -1.41
LRCH3-213ENST00000471667 ABCC1P33527 1531 aa6.23□□□□□ -1.41
LRCH3-213ENST00000471667 IQGAP1P46940 1657 aa6.23□□□□□ -1.41
LRCH3-213ENST00000471667 NWD1Q149M9 1564 aa6.23□□□□□ -1.41
LRCH3-213ENST00000471667 PHLPP1O60346 1717 aa6.22□□□□□ -1.41
LRCH3-213ENST00000471667 LRP6O75581 1613 aa6.22□□□□□ -1.41
LRCH3-213ENST00000471667 MSH6P52701 1360 aa6.22□□□□□ -1.41
LRCH3-213ENST00000471667 CFAP99D6REC4 459 aa6.22□□□□□ -1.41
LRCH3-213ENST00000471667 SPTLC1O15269 473 aa6.22□□□□□ -1.41
LRCH3-213ENST00000471667 CTHP32929 405 aa6.22□□□□□ -1.41
LRCH3-213ENST00000471667 C8orf37Q96NL8 207 aa6.22□□□□□ -1.41
LRCH3-213ENST00000471667 NHSL1Q5SYE7 1610 aa6.21□□□□□ -1.41
LRCH3-213ENST00000471667 ABCA6Q8N139 1617 aa6.21□□□□□ -1.41
LRCH3-213ENST00000471667 ARHGAP5Q13017 1502 aa6.21□□□□□ -1.42
LRCH3-213ENST00000471667 CTTNBP2Q8WZ74 1663 aa6.21□□□□□ -1.42
LRCH3-213ENST00000471667 PLEKHG3A1L390 1219 aa6.21□□□□□ -1.42
LRCH3-213ENST00000471667 HRCP23327 699 aa6.21□□□□□ -1.42
LRCH3-213ENST00000471667 INSM1Q01101 510 aaPredicted RBP6.21□□□□□ -1.42
LRCH3-213ENST00000471667 ZBTB3Q9H5J0 574 aa6.21□□□□□ -1.42
LRCH3-213ENST00000471667 SLAIN2Q9P270 581 aa6.21□□□□□ -1.42
LRCH3-213ENST00000471667 CDK11AQ9UQ88 783 aaPredicted RBP6.21□□□□□ -1.42
LRCH3-213ENST00000471667 CLTCQ00610 1675 aaKnown RBP6.2□□□□□ -1.42
LRCH3-213ENST00000471667 TMEM94Q12767 1356 aa6.2□□□□□ -1.42
LRCH3-213ENST00000471667 UGGT1Q9NYU2 1555 aa6.2□□□□□ -1.42
LRCH3-213ENST00000471667 BLMP54132 1417 aaPredicted RBP6.2□□□□□ -1.42
LRCH3-213ENST00000471667 NNTQ13423 1086 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms