RNA–Protein interactions for RNA: ENST00000470985.3

LDHB-206, Transcript of lactate dehydrogenase B, humanhuman

TSL 1 (best)

Gene LDHB, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-206ENST00000470985 GGCXP38435 758 aa11.52□□□□□ -0.57
LDHB-206ENST00000470985 KMT5BQ4FZB7 885 aa11.52□□□□□ -0.57
LDHB-206ENST00000470985 TJAP1Q5JTD0 557 aa11.52□□□□□ -0.57
LDHB-206ENST00000470985 BCANQ96GW7 911 aa11.52□□□□□ -0.57
LDHB-206ENST00000470985 IRX2Q9BZI1 471 aaPredicted RBP11.52□□□□□ -0.57
LDHB-206ENST00000470985 PPP1R1BQ9UD71 204 aaPredicted RBP11.52□□□□□ -0.57
LDHB-206ENST00000470985 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.51□□□□□ -0.57
LDHB-206ENST00000470985 RCCD1A6NED2 376 aa11.51□□□□□ -0.57
LDHB-206ENST00000470985 APLP1P51693 650 aa11.51□□□□□ -0.57
LDHB-206ENST00000470985 SEPT12Q8IYM1 358 aa11.51□□□□□ -0.57
LDHB-206ENST00000470985 TMEM134Q9H6X4 195 aa11.5□□□□□ -0.57
LDHB-206ENST00000470985 CEP152O94986 1710 aa11.49□□□□□ -0.57
LDHB-206ENST00000470985 GNPATO15228 680 aa11.49□□□□□ -0.57
LDHB-206ENST00000470985 KDM2AQ9Y2K7 1162 aa11.49□□□□□ -0.57
LDHB-206ENST00000470985 COPS2P61201 443 aa11.48□□□□□ -0.57
LDHB-206ENST00000470985 EZH2Q15910 746 aaKnown RBP11.48□□□□□ -0.57
LDHB-206ENST00000470985 PCDHB3Q9Y5E6 796 aa11.48□□□□□ -0.57
LDHB-206ENST00000470985 MYOM2P54296 1465 aa11.47□□□□□ -0.57
LDHB-206ENST00000470985 FAM161AQ3B820 660 aa11.47□□□□□ -0.57
LDHB-206ENST00000470985 KRT27Q7Z3Y8 459 aa11.47□□□□□ -0.57
LDHB-206ENST00000470985 DCCP43146 1447 aa11.46□□□□□ -0.57
LDHB-206ENST00000470985 DISP2A7MBM2 1401 aa11.45□□□□□ -0.58
LDHB-206ENST00000470985 GPIHBP1Q8IV16 184 aa11.45□□□□□ -0.58
LDHB-206ENST00000470985 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.45□□□□□ -0.58
LDHB-206ENST00000470985 CCDC18Q5T9S5 1454 aa11.44□□□□□ -0.58
LDHB-206ENST00000470985 IDI1Q13907 227 aa11.44□□□□□ -0.58
LDHB-206ENST00000470985 SPON1Q9HCB6 807 aa11.44□□□□□ -0.58
LDHB-206ENST00000470985 COL22A1Q8NFW1 1626 aaPredicted RBP11.44□□□□□ -0.58
LDHB-206ENST00000470985 CCNB3Q8WWL7 1395 aa11.43□□□□□ -0.58
LDHB-206ENST00000470985 PLEKHG1Q9ULL1 1385 aa11.43□□□□□ -0.58
LDHB-206ENST00000470985 UNC5CLQ8IV45 518 aa11.43□□□□□ -0.58
LDHB-206ENST00000470985 PXYLP1Q8TE99 480 aa11.43□□□□□ -0.58
LDHB-206ENST00000470985 SOS2Q07890 1332 aaPredicted RBP11.42□□□□□ -0.58
LDHB-206ENST00000470985 ADGRB3O60242 1522 aa11.42□□□□□ -0.58
LDHB-206ENST00000470985 SLIT2O94813 1529 aa11.42□□□□□ -0.58
LDHB-206ENST00000470985 KCNQ2O43526 872 aa11.42□□□□□ -0.58
LDHB-206ENST00000470985 PRELPP51888 382 aa11.42□□□□□ -0.58
LDHB-206ENST00000470985 COL13A1Q5TAT6 717 aaPredicted RBP11.42□□□□□ -0.58
LDHB-206ENST00000470985 PPP1R18Q6NYC8 613 aa11.42□□□□□ -0.58
LDHB-206ENST00000470985 METTL3Q86U44 580 aaKnown RBP11.42□□□□□ -0.58
LDHB-206ENST00000470985 ZNF516Q92618 1163 aa11.42□□□□□ -0.58
LDHB-206ENST00000470985 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.42□□□□□ -0.58
LDHB-206ENST00000470985 RGPD1P0DJD0 1748 aa11.42□□□□□ -0.58
LDHB-206ENST00000470985 TNS1Q9HBL0 1735 aaKnown RBP11.42□□□□□ -0.58
LDHB-206ENST00000470985 CCDC141Q6ZP82 1450 aa11.42□□□□□ -0.58
LDHB-206ENST00000470985 ZPR1O75312 459 aa11.41□□□□□ -0.58
LDHB-206ENST00000470985 PPP1R15AO75807 674 aaPredicted RBP11.41□□□□□ -0.58
LDHB-206ENST00000470985 CFHP08603 1231 aa11.41□□□□□ -0.58
LDHB-206ENST00000470985 FAM182BQ5T319 152 aa11.41□□□□□ -0.58
LDHB-206ENST00000470985 ZFYVE9O95405 1425 aa11.41□□□□□ -0.58
LDHB-206ENST00000470985 ARHGAP31Q2M1Z3 1444 aa11.41□□□□□ -0.58
LDHB-206ENST00000470985 CAMKK2Q96RR4 588 aa11.4□□□□□ -0.58
LDHB-206ENST00000470985 ADAMTS13Q76LX8 1427 aa11.4□□□□□ -0.58
LDHB-206ENST00000470985 PTPRUQ92729 1446 aa11.4□□□□□ -0.58
LDHB-206ENST00000470985 CHD4Q14839 1912 aa11.4□□□□□ -0.58
LDHB-206ENST00000470985 NRKQ7Z2Y5 1582 aa11.4□□□□□ -0.58
LDHB-206ENST00000470985 MARF1Q9Y4F3 1742 aaKnown RBP11.4□□□□□ -0.58
LDHB-206ENST00000470985 TRPM2O94759 1503 aa11.4□□□□□ -0.59
LDHB-206ENST00000470985 LAMC1P11047 1609 aa11.39□□□□□ -0.59
LDHB-206ENST00000470985 ACTN4O43707 911 aaKnown RBP11.39□□□□□ -0.59
LDHB-206ENST00000470985 NR1I2O75469 434 aa11.39□□□□□ -0.59
LDHB-206ENST00000470985 TMUB1Q9BVT8 246 aa11.39□□□□□ -0.59
LDHB-206ENST00000470985 TBX22Q9Y458 520 aa11.39□□□□□ -0.59
LDHB-206ENST00000470985 LAPTM4AQ15012 233 aa11.38□□□□□ -0.59
LDHB-206ENST00000470985 SULF1Q8IWU6 871 aa11.38□□□□□ -0.59
LDHB-206ENST00000470985 CASKIN1Q8WXD9 1431 aa11.37□□□□□ -0.59
LDHB-206ENST00000470985 HSPA6P17066 643 aa11.37□□□□□ -0.59
LDHB-206ENST00000470985 RDH13Q8NBN7 331 aa11.37□□□□□ -0.59
LDHB-206ENST00000470985 DAXXQ9UER7 740 aaPredicted RBP11.37□□□□□ -0.59
LDHB-206ENST00000470985 SHANK3Q9BYB0 1731 aa11.37□□□□□ -0.59
LDHB-206ENST00000470985 BLOC1S3Q6QNY0 202 aa11.36□□□□□ -0.59
LDHB-206ENST00000470985 PRKD2Q9BZL6 878 aa11.36□□□□□ -0.59
LDHB-206ENST00000470985 AMOTL2Q9Y2J4 779 aa11.36□□□□□ -0.59
LDHB-206ENST00000470985 MYOM1P52179 1685 aa11.36□□□□□ -0.59
LDHB-206ENST00000470985 NUP188Q5SRE5 1749 aa11.35□□□□□ -0.59
LDHB-206ENST00000470985 MYT1Q01538 1121 aa11.35□□□□□ -0.59
LDHB-206ENST00000470985 NKX2-3Q8TAU0 364 aa11.35□□□□□ -0.59
LDHB-206ENST00000470985 C1orf167Q5SNV9 1468 aa11.35□□□□□ -0.59
LDHB-206ENST00000470985 EIF2AK4Q9P2K8 1649 aaKnown RBP11.35□□□□□ -0.59
LDHB-206ENST00000470985 ADGRL3Q9HAR2 1447 aa11.35□□□□□ -0.59
LDHB-206ENST00000470985 RIMS2Q9UQ26 1411 aa11.35□□□□□ -0.59
LDHB-206ENST00000470985 RREB1Q92766 1687 aa11.34□□□□□ -0.59
LDHB-206ENST00000470985 MTUS2Q5JR59 1369 aa11.34□□□□□ -0.59
LDHB-206ENST00000470985 FECHP22830 423 aa11.34□□□□□ -0.59
LDHB-206ENST00000470985 VPS72Q15906 364 aa11.34□□□□□ -0.59
LDHB-206ENST00000470985 ORAI2Q96SN7 254 aa11.34□□□□□ -0.59
LDHB-206ENST00000470985 V9GY48 417 aaPredicted RBP11.34□□□□□ -0.59
LDHB-206ENST00000470985 EHBP1L1Q8N3D4 1523 aa11.34□□□□□ -0.59
LDHB-206ENST00000470985 NOS1P29475 1434 aa11.34□□□□□ -0.59
LDHB-206ENST00000470985 GOLGB1Q14789 3259 aaKnown RBP11.33□□□□□ -0.6
LDHB-206ENST00000470985 PIK3R4Q99570 1358 aa11.33□□□□□ -0.6
LDHB-206ENST00000470985 DDX11L8A8MPP1 907 aa11.33□□□□□ -0.6
LDHB-206ENST00000470985 TNS4Q8IZW8 715 aa11.33□□□□□ -0.6
LDHB-206ENST00000470985 ADGRB2O60241 1585 aa11.33□□□□□ -0.6
LDHB-206ENST00000470985 CCDC9Q9Y3X0 531 aaKnown RBP11.32□□□□□ -0.6
LDHB-206ENST00000470985 SLC10A3P09131 477 aa11.31□□□□□ -0.6
LDHB-206ENST00000470985 Q6ZNB5 142 aa11.31□□□□□ -0.6
LDHB-206ENST00000470985 NALCNQ8IZF0 1738 aa11.3□□□□□ -0.6
LDHB-206ENST00000470985 XRN1Q8IZH2 1706 aaKnown RBP11.3□□□□□ -0.6
LDHB-206ENST00000470985 GFRA3O60609 400 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 270.4 ms