RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 LY75O60449 1722 aa9.76□□□□□ -0.85
SF3A3-205ENST00000470585 SAMD1Q6SPF0 538 aaPredicted RBP9.76□□□□□ -0.85
SF3A3-205ENST00000470585 FLAD1Q8NFF5 587 aa9.76□□□□□ -0.85
SF3A3-205ENST00000470585 NLRP2Q9NX02 1062 aa9.76□□□□□ -0.85
SF3A3-205ENST00000470585 TFCP2L1Q9NZI6 479 aa9.76□□□□□ -0.85
SF3A3-205ENST00000470585 CGNL1Q0VF96 1302 aa9.76□□□□□ -0.85
SF3A3-205ENST00000470585 ANKRD36BQ8N2N9 1353 aa9.75□□□□□ -0.85
SF3A3-205ENST00000470585 EDC4Q6P2E9 1401 aaKnown RBP9.75□□□□□ -0.85
SF3A3-205ENST00000470585 ACSBG1Q96GR2 724 aa9.75□□□□□ -0.85
SF3A3-205ENST00000470585 CD2APQ9Y5K6 639 aa9.75□□□□□ -0.85
SF3A3-205ENST00000470585 LTN1O94822 1766 aa9.75□□□□□ -0.85
SF3A3-205ENST00000470585 ADCY9O60503 1353 aa9.75□□□□□ -0.85
SF3A3-205ENST00000470585 RBM42Q9BTD8 480 aaKnown RBP9.74□□□□□ -0.85
SF3A3-205ENST00000470585 TUBGCP6Q96RT7 1819 aa9.74□□□□□ -0.85
SF3A3-205ENST00000470585 HSPA6P17066 643 aa9.73□□□□□ -0.85
SF3A3-205ENST00000470585 ANKRD24Q8TF21 1146 aa9.73□□□□□ -0.85
SF3A3-205ENST00000470585 NSD3Q9BZ95 1437 aa9.73□□□□□ -0.85
SF3A3-205ENST00000470585 ATP10DQ9P241 1426 aa9.73□□□□□ -0.85
SF3A3-205ENST00000470585 SLC24A1O60721 1099 aa9.72□□□□□ -0.85
SF3A3-205ENST00000470585 HDGFL2Q7Z4V5 671 aaPredicted RBP9.72□□□□□ -0.85
SF3A3-205ENST00000470585 IP6K1Q92551 441 aa9.72□□□□□ -0.85
SF3A3-205ENST00000470585 GPBP1L1Q9HC44 474 aaPredicted RBP9.72□□□□□ -0.85
SF3A3-205ENST00000470585 ROCK2O75116 1388 aaKnown RBP9.72□□□□□ -0.85
SF3A3-205ENST00000470585 CD163L1Q9NR16 1453 aa9.72□□□□□ -0.85
SF3A3-205ENST00000470585 YBX3P16989 372 aaKnown RBP eCLIP9.71□□□□□ -0.861e-7■■■□□ 16.2
SF3A3-205ENST00000470585 CHRDL2Q6WN34 429 aa9.71□□□□□ -0.86
SF3A3-205ENST00000470585 NLGN2Q8NFZ4 835 aa9.71□□□□□ -0.86
SF3A3-205ENST00000470585 TERF2IPQ9NYB0 399 aa9.71□□□□□ -0.86
SF3A3-205ENST00000470585 RTL1A6NKG5 1358 aa9.71□□□□□ -0.86
SF3A3-205ENST00000470585 NSD2O96028 1365 aa9.71□□□□□ -0.86
SF3A3-205ENST00000470585 SOX12O15370 315 aa9.7□□□□□ -0.86
SF3A3-205ENST00000470585 PELP1Q8IZL8 1130 aaKnown RBP9.7□□□□□ -0.86
SF3A3-205ENST00000470585 CCNL1Q9UK58 526 aaPredicted RBP9.7□□□□□ -0.86
SF3A3-205ENST00000470585 USP47Q96K76 1375 aa9.7□□□□□ -0.86
SF3A3-205ENST00000470585 PRIM1P49642 420 aaKnown RBP9.69□□□□□ -0.86
SF3A3-205ENST00000470585 KLHL34Q8N239 644 aa9.69□□□□□ -0.86
SF3A3-205ENST00000470585 ZCRB1Q8TBF4 217 aaKnown RBP9.69□□□□□ -0.86
SF3A3-205ENST00000470585 DOT1LQ8TEK3 1739 aa9.69□□□□□ -0.86
SF3A3-205ENST00000470585 CICQ96RK0 1608 aaPredicted RBP9.68□□□□□ -0.86
SF3A3-205ENST00000470585 NME9Q86XW9 330 aa9.68□□□□□ -0.86
SF3A3-205ENST00000470585 DDX54Q8TDD1 881 aaKnown RBP9.68□□□□□ -0.86
SF3A3-205ENST00000470585 L3MBTL2Q969R5 705 aa9.68□□□□□ -0.86
SF3A3-205ENST00000470585 C5P01031 1676 aa9.67□□□□□ -0.86
SF3A3-205ENST00000470585 KIF24Q5T7B8 1368 aa9.67□□□□□ -0.86
SF3A3-205ENST00000470585 APLP1P51693 650 aa9.67□□□□□ -0.86
SF3A3-205ENST00000470585 POLA2Q14181 598 aa9.67□□□□□ -0.86
SF3A3-205ENST00000470585 COL23A1Q86Y22 540 aaPredicted RBP9.67□□□□□ -0.86
SF3A3-205ENST00000470585 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.67□□□□□ -0.86
SF3A3-205ENST00000470585 PLEKHG2Q9H7P9 1386 aa9.66□□□□□ -0.86
SF3A3-205ENST00000470585 TAF1LQ8IZX4 1826 aa9.66□□□□□ -0.86
SF3A3-205ENST00000470585 SMARCC1Q92922 1105 aaPredicted RBP9.66□□□□□ -0.86
SF3A3-205ENST00000470585 SYTL4Q96C24 671 aaPredicted RBP9.66□□□□□ -0.86
SF3A3-205ENST00000470585 SMG6Q86US8 1419 aaKnown RBP9.65□□□□□ -0.86
SF3A3-205ENST00000470585 A0A1W2PP64 1363 aa9.65□□□□□ -0.86
SF3A3-205ENST00000470585 PCDH11XQ9BZA7 1347 aa9.65□□□□□ -0.86
SF3A3-205ENST00000470585 PCDH11YQ9BZA8 1340 aa9.65□□□□□ -0.86
SF3A3-205ENST00000470585 HOXC9P31274 260 aa9.65□□□□□ -0.86
SF3A3-205ENST00000470585 MAP3K19Q56UN5 1328 aa9.64□□□□□ -0.87
SF3A3-205ENST00000470585 SSFA2P28290 1259 aa9.64□□□□□ -0.87
SF3A3-205ENST00000470585 RAPGEF4Q8WZA2 1011 aa9.64□□□□□ -0.87
SF3A3-205ENST00000470585 COG3Q96JB2 828 aa9.64□□□□□ -0.87
SF3A3-205ENST00000470585 MEGF6O75095 1541 aa9.64□□□□□ -0.87
SF3A3-205ENST00000470585 PALLDQ8WX93 1383 aa9.63□□□□□ -0.87
SF3A3-205ENST00000470585 KIF3CO14782 793 aa9.63□□□□□ -0.87
SF3A3-205ENST00000470585 AMPHP49418 695 aa9.63□□□□□ -0.87
SF3A3-205ENST00000470585 C4BP0C0L5 1744 aa9.62□□□□□ -0.87
SF3A3-205ENST00000470585 UBR3Q6ZT12 1888 aa9.62□□□□□ -0.87
SF3A3-205ENST00000470585 TOMM70O94826 608 aa9.62□□□□□ -0.87
SF3A3-205ENST00000470585 TMC1Q8TDI8 760 aa9.62□□□□□ -0.87
SF3A3-205ENST00000470585 SLC12A5Q9H2X9 1139 aa9.62□□□□□ -0.87
SF3A3-205ENST00000470585 KIF13BQ9NQT8 1826 aa9.61□□□□□ -0.87
SF3A3-205ENST00000470585 IGSF1Q8N6C5 1336 aa9.61□□□□□ -0.87
SF3A3-205ENST00000470585 TATP17735 454 aaPredicted RBP9.61□□□□□ -0.87
SF3A3-205ENST00000470585 TGFB2P61812 414 aa9.61□□□□□ -0.87
SF3A3-205ENST00000470585 AK7Q96M32 723 aa9.61□□□□□ -0.87
SF3A3-205ENST00000470585 INSRP06213 1382 aa9.61□□□□□ -0.87
SF3A3-205ENST00000470585 NCAPD2Q15021 1401 aa9.6□□□□□ -0.87
SF3A3-205ENST00000470585 C10orf71Q711Q0 1435 aa9.6□□□□□ -0.87
SF3A3-205ENST00000470585 KCNQ4P56696 695 aa9.6□□□□□ -0.87
SF3A3-205ENST00000470585 NKX1-1Q15270 411 aaPredicted RBP9.6□□□□□ -0.87
SF3A3-205ENST00000470585 DNAJC5GQ8N7S2 189 aa9.6□□□□□ -0.87
SF3A3-205ENST00000470585 CARD11Q9BXL7 1154 aa9.6□□□□□ -0.87
SF3A3-205ENST00000470585 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.6□□□□□ -0.873e-7■■■■□ 24.9
SF3A3-205ENST00000470585 PKD1L3Q7Z443 1732 aa9.59□□□□□ -0.87
SF3A3-205ENST00000470585 ZNF831Q5JPB2 1677 aa9.59□□□□□ -0.87
SF3A3-205ENST00000470585 FSTL1Q12841 308 aa9.59□□□□□ -0.87
SF3A3-205ENST00000470585 MSL1Q68DK7 614 aa9.59□□□□□ -0.87
SF3A3-205ENST00000470585 RBM46Q8TBY0 533 aaKnown RBP9.59□□□□□ -0.87
SF3A3-205ENST00000470585 LTV1Q96GA3 475 aaPredicted RBP9.59□□□□□ -0.87
SF3A3-205ENST00000470585 FLT4P35916 1363 aa9.59□□□□□ -0.87
SF3A3-205ENST00000470585 TOGARAM1Q9Y4F4 1720 aa9.59□□□□□ -0.87
SF3A3-205ENST00000470585 MAP2P11137 1827 aaKnown RBP9.59□□□□□ -0.88
SF3A3-205ENST00000470585 RGPD2P0DJD1 1756 aa9.58□□□□□ -0.88
SF3A3-205ENST00000470585 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.58□□□□□ -0.88
SF3A3-205ENST00000470585 NBPF6Q5VWK0 638 aa9.58□□□□□ -0.88
SF3A3-205ENST00000470585 JMYQ8N9B5 988 aa9.58□□□□□ -0.88
SF3A3-205ENST00000470585 NBPF4Q96M43 638 aa9.58□□□□□ -0.88
SF3A3-205ENST00000470585 ITGB4P16144 1822 aa9.58□□□□□ -0.88
SF3A3-205ENST00000470585 PXDNLA1KZ92 1463 aa9.57□□□□□ -0.88
SF3A3-205ENST00000470585 ZC3H4Q9UPT8 1303 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms