RNA–Protein interactions for RNA: ENST00000470470.1

CHD6-206, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 5

Gene CHD6, Length 1,349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-206ENST00000470470 DXOO77932 396 aaKnown RBP8.8□□□□□ -1
CHD6-206ENST00000470470 HNRNPMP52272 730 aaKnown RBP eCLIP8.8□□□□□ -14e-6■■■■□ 23.6
CHD6-206ENST00000470470 ZSCAN1Q8NBB4 408 aa8.8□□□□□ -1
CHD6-206ENST00000470470 SLC16A10Q8TF71 515 aa8.8□□□□□ -1
CHD6-206ENST00000470470 LORP23490 312 aaPredicted RBP8.79□□□□□ -1
CHD6-206ENST00000470470 SUZ12Q15022 739 aaKnown RBP8.79□□□□□ -1
CHD6-206ENST00000470470 USB1Q9BQ65 265 aaKnown RBP8.79□□□□□ -1
CHD6-206ENST00000470470 ARHGAP5Q13017 1502 aa8.79□□□□□ -1
CHD6-206ENST00000470470 IQGAP3Q86VI3 1631 aa8.78□□□□□ -1
CHD6-206ENST00000470470 SYCP2Q9BX26 1530 aa8.78□□□□□ -1
CHD6-206ENST00000470470 DUOX2Q9NRD8 1548 aa8.78□□□□□ -1
CHD6-206ENST00000470470 IRF6O14896 467 aa8.78□□□□□ -1
CHD6-206ENST00000470470 CD46P15529 392 aa8.78□□□□□ -1
CHD6-206ENST00000470470 WNT7BP56706 349 aa8.78□□□□□ -1
CHD6-206ENST00000470470 RALGAPBQ86X10 1494 aa8.78□□□□□ -1
CHD6-206ENST00000470470 KDM5CP41229 1560 aa8.77□□□□□ -1.01
CHD6-206ENST00000470470 FAM135AQ9P2D6 1515 aa8.77□□□□□ -1.01
CHD6-206ENST00000470470 ATP10AO60312 1499 aa8.77□□□□□ -1.01
CHD6-206ENST00000470470 MAGI2Q86UL8 1455 aa8.77□□□□□ -1.01
CHD6-206ENST00000470470 J3QL48 77 aa8.77□□□□□ -1.01
CHD6-206ENST00000470470 NEUROD2Q15784 382 aa8.77□□□□□ -1.01
CHD6-206ENST00000470470 CCDC102AQ96A19 550 aa8.77□□□□□ -1.01
CHD6-206ENST00000470470 EFCAB2Q5VUJ9 269 aa8.76□□□□□ -1.01
CHD6-206ENST00000470470 RTEL1-TNFRSF6BF6WH68 1400 aa8.76□□□□□ -1.01
CHD6-206ENST00000470470 ERBINQ96RT1 1412 aa8.76□□□□□ -1.01
CHD6-206ENST00000470470 ABCC1P33527 1531 aa8.75□□□□□ -1.01
CHD6-206ENST00000470470 KDM4AO75164 1064 aa8.75□□□□□ -1.01
CHD6-206ENST00000470470 GMPRP36959 345 aa8.75□□□□□ -1.01
CHD6-206ENST00000470470 USP46P62068 366 aa8.75□□□□□ -1.01
CHD6-206ENST00000470470 LAMC1P11047 1609 aa8.74□□□□□ -1.01
CHD6-206ENST00000470470 BCORL1Q5H9F3 1711 aa8.74□□□□□ -1.01
CHD6-206ENST00000470470 TRIM66O15016 1216 aa8.74□□□□□ -1.01
CHD6-206ENST00000470470 HPS1Q92902 700 aa8.74□□□□□ -1.01
CHD6-206ENST00000470470 NXF1Q9UBU9 619 aaKnown RBP8.74□□□□□ -1.01
CHD6-206ENST00000470470 SUPT16HQ9Y5B9 1047 aaKnown RBP8.74□□□□□ -1.01
CHD6-206ENST00000470470 KIF7Q2M1P5 1343 aa8.73□□□□□ -1.01
CHD6-206ENST00000470470 RC3H1Q5TC82 1133 aaKnown RBP8.73□□□□□ -1.01
CHD6-206ENST00000470470 ROCK2O75116 1388 aaKnown RBP8.73□□□□□ -1.01
CHD6-206ENST00000470470 ABCA9Q8IUA7 1624 aa8.72□□□□□ -1.01
CHD6-206ENST00000470470 NPAS3Q8IXF0 933 aa8.72□□□□□ -1.01
CHD6-206ENST00000470470 IRF7Q92985 503 aa8.72□□□□□ -1.01
CHD6-206ENST00000470470 PRKRIP1Q9H875 184 aaPredicted RBP8.72□□□□□ -1.01
CHD6-206ENST00000470470 USP47Q96K76 1375 aa8.72□□□□□ -1.01
CHD6-206ENST00000470470 PLA2R1Q13018 1463 aa8.72□□□□□ -1.01
CHD6-206ENST00000470470 TRPM1Q7Z4N2 1603 aa8.71□□□□□ -1.01
CHD6-206ENST00000470470 WDR7Q9Y4E6 1490 aa8.71□□□□□ -1.02
CHD6-206ENST00000470470 BRPF1P55201 1214 aaPredicted RBP8.71□□□□□ -1.02
CHD6-206ENST00000470470 SKOR1P84550 965 aa8.71□□□□□ -1.02
CHD6-206ENST00000470470 PDE4DQ08499 809 aa8.71□□□□□ -1.02
CHD6-206ENST00000470470 TTLL12Q14166 644 aaPredicted RBP8.71□□□□□ -1.02
CHD6-206ENST00000470470 CCDC24Q8N4L8 307 aa8.71□□□□□ -1.02
CHD6-206ENST00000470470 DEPDC5O75140 1603 aa8.71□□□□□ -1.02
CHD6-206ENST00000470470 GPRASP1Q5JY77 1395 aa8.7□□□□□ -1.02
CHD6-206ENST00000470470 NEURL4Q96JN8 1562 aa8.69□□□□□ -1.02
CHD6-206ENST00000470470 DHX29Q7Z478 1369 aaKnown RBP8.69□□□□□ -1.02
CHD6-206ENST00000470470 EIF2AK4Q9P2K8 1649 aaKnown RBP8.69□□□□□ -1.02
CHD6-206ENST00000470470 HOXA2O43364 376 aa8.69□□□□□ -1.02
CHD6-206ENST00000470470 JUNDP17535 347 aa8.69□□□□□ -1.02
CHD6-206ENST00000470470 CCDC144AA2RUR9 1427 aa8.69□□□□□ -1.02
CHD6-206ENST00000470470 PRAG1Q86YV5 1406 aa8.69□□□□□ -1.02
CHD6-206ENST00000470470 KTN1Q86UP2 1357 aaKnown RBP8.68□□□□□ -1.02
CHD6-206ENST00000470470 E9PCH4 1651 aa8.68□□□□□ -1.02
CHD6-206ENST00000470470 AMHR2Q16671 573 aa8.68□□□□□ -1.02
CHD6-206ENST00000470470 TRAPPC8Q9Y2L5 1435 aa8.68□□□□□ -1.02
CHD6-206ENST00000470470 INO80Q9ULG1 1556 aaPredicted RBP8.68□□□□□ -1.02
CHD6-206ENST00000470470 ZFYVE16Q7Z3T8 1539 aa8.67□□□□□ -1.02
CHD6-206ENST00000470470 ALDH1A1P00352 501 aa8.67□□□□□ -1.02
CHD6-206ENST00000470470 VWDEQ8N2E2 1590 aa8.67□□□□□ -1.02
CHD6-206ENST00000470470 TET3O43151 1660 aa8.67□□□□□ -1.02
CHD6-206ENST00000470470 PTPRTO14522 1441 aa8.66□□□□□ -1.02
CHD6-206ENST00000470470 CLCN1P35523 988 aa8.66□□□□□ -1.02
CHD6-206ENST00000470470 DCAF11Q8TEB1 546 aa8.66□□□□□ -1.02
CHD6-206ENST00000470470 HLA-CQ95604 372 aa8.66□□□□□ -1.02
CHD6-206ENST00000470470 CARD11Q9BXL7 1154 aa8.66□□□□□ -1.02
CHD6-206ENST00000470470 A2MP01023 1474 aa8.66□□□□□ -1.02
CHD6-206ENST00000470470 SPAG9O60271 1321 aaKnown RBP8.66□□□□□ -1.02
CHD6-206ENST00000470470 PRDM15P57071 1507 aaPredicted RBP8.66□□□□□ -1.02
CHD6-206ENST00000470470 CEP152O94986 1710 aa8.66□□□□□ -1.02
CHD6-206ENST00000470470 ERICH6BQ5W0A0 696 aa8.65□□□□□ -1.02
CHD6-206ENST00000470470 SPHKAPQ2M3C7 1700 aa8.65□□□□□ -1.02
CHD6-206ENST00000470470 RNF17Q9BXT8 1623 aaKnown RBP8.64□□□□□ -1.03
CHD6-206ENST00000470470 FANCAO15360 1455 aa8.64□□□□□ -1.03
CHD6-206ENST00000470470 KIAA1210Q9ULL0 1709 aa8.64□□□□□ -1.03
CHD6-206ENST00000470470 H3BM21 787 aa8.64□□□□□ -1.03
CHD6-206ENST00000470470 SIAH2O43255 324 aa8.64□□□□□ -1.03
CHD6-206ENST00000470470 RETREG3Q86VR2 466 aa8.64□□□□□ -1.03
CHD6-206ENST00000470470 NUDT12Q9BQG2 462 aa8.64□□□□□ -1.03
CHD6-206ENST00000470470 KDM4CQ9H3R0 1056 aa8.64□□□□□ -1.03
CHD6-206ENST00000470470 TRPM2O94759 1503 aa8.64□□□□□ -1.03
CHD6-206ENST00000470470 ATP7AQ04656 1500 aa8.64□□□□□ -1.03
CHD6-206ENST00000470470 CFAP74Q9C0B2 1584 aa8.64□□□□□ -1.03
CHD6-206ENST00000470470 NEFLP07196 543 aa8.63□□□□□ -1.03
CHD6-206ENST00000470470 HNRNPUQ00839 825 aaKnown RBP eCLIP8.63□□□□□ -1.03
CHD6-206ENST00000470470 MDM2Q00987 491 aaPredicted RBP8.63□□□□□ -1.03
CHD6-206ENST00000470470 EHBP1Q8NDI1 1231 aa8.63□□□□□ -1.03
CHD6-206ENST00000470470 GPBP1L1Q9HC44 474 aaPredicted RBP8.63□□□□□ -1.03
CHD6-206ENST00000470470 GPCPD1Q9NPB8 672 aa8.63□□□□□ -1.03
CHD6-206ENST00000470470 ZBED9Q6R2W3 1325 aa8.63□□□□□ -1.03
CHD6-206ENST00000470470 WASHC2CQ9Y4E1 1318 aa8.63□□□□□ -1.03
CHD6-206ENST00000470470 ST20-MTHFSA0A0A6YYL1 179 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms