RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 NRKQ7Z2Y5 1582 aa12.73□□□□□ -0.37
SMC4-210ENST00000469762 GPT2Q8TD30 523 aa12.73□□□□□ -0.37
SMC4-210ENST00000469762 API5Q9BZZ5 524 aaKnown RBP12.73□□□□□ -0.37
SMC4-210ENST00000469762 PTMSP20962 102 aa12.72□□□□□ -0.37
SMC4-210ENST00000469762 CALD1Q05682 793 aaKnown RBP12.72□□□□□ -0.37
SMC4-210ENST00000469762 CCDC173Q0VFZ6 552 aa12.72□□□□□ -0.37
SMC4-210ENST00000469762 MCTP1Q6DN14 999 aa12.72□□□□□ -0.37
SMC4-210ENST00000469762 RTL1A6NKG5 1358 aa12.72□□□□□ -0.37
SMC4-210ENST00000469762 RBSNQ9H1K0 784 aa12.72□□□□□ -0.37
SMC4-210ENST00000469762 AKAP12Q02952 1782 aa12.72□□□□□ -0.37
SMC4-210ENST00000469762 ZSCAN23Q3MJ62 389 aa12.72□□□□□ -0.37
SMC4-210ENST00000469762 MSH6P52701 1360 aa12.72□□□□□ -0.37
SMC4-210ENST00000469762 AEBP1Q8IUX7 1158 aa12.71□□□□□ -0.37
SMC4-210ENST00000469762 TRIM44Q96DX7 344 aaPredicted RBP12.71□□□□□ -0.37
SMC4-210ENST00000469762 NSFL1CQ9UNZ2 370 aaKnown RBP12.71□□□□□ -0.37
SMC4-210ENST00000469762 DIP2BQ9P265 1576 aa12.71□□□□□ -0.37
SMC4-210ENST00000469762 A2ML1A8K2U0 1454 aa12.71□□□□□ -0.37
SMC4-210ENST00000469762 RRP9O43818 475 aaKnown RBP12.71□□□□□ -0.38
SMC4-210ENST00000469762 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.38
SMC4-210ENST00000469762 CAVIN1Q6NZI2 390 aaKnown RBP12.7□□□□□ -0.38
SMC4-210ENST00000469762 PDLIM2Q96JY6 352 aa12.7□□□□□ -0.38
SMC4-210ENST00000469762 MEIS3Q99687 375 aa12.7□□□□□ -0.38
SMC4-210ENST00000469762 PRIM1P49642 420 aaKnown RBP12.7□□□□□ -0.38
SMC4-210ENST00000469762 HSP90AA2PQ14568 343 aaPredicted RBP12.7□□□□□ -0.38
SMC4-210ENST00000469762 RBM27Q9P2N5 1060 aaKnown RBP12.7□□□□□ -0.38
SMC4-210ENST00000469762 RGPD1P0DJD0 1748 aa12.69□□□□□ -0.38
SMC4-210ENST00000469762 ZSCAN30Q86W11 494 aa12.69□□□□□ -0.38
SMC4-210ENST00000469762 PEAK1Q9H792 1746 aa12.69□□□□□ -0.38
SMC4-210ENST00000469762 CHL1O00533 1208 aa12.69□□□□□ -0.38
SMC4-210ENST00000469762 WASLO00401 505 aaPredicted RBP12.68□□□□□ -0.38
SMC4-210ENST00000469762 METP08581 1390 aa12.68□□□□□ -0.38
SMC4-210ENST00000469762 NUCB2P80303 420 aa12.68□□□□□ -0.38
SMC4-210ENST00000469762 RPAP2Q8IXW5 612 aaPredicted RBP12.68□□□□□ -0.38
SMC4-210ENST00000469762 TMEM63CQ9P1W3 806 aa12.68□□□□□ -0.38
SMC4-210ENST00000469762 SALL3Q9BXA9 1300 aa12.67□□□□□ -0.38
SMC4-210ENST00000469762 OFD1O75665 1012 aa12.67□□□□□ -0.38
SMC4-210ENST00000469762 KIAA1211Q6ZU35 1233 aa12.67□□□□□ -0.38
SMC4-210ENST00000469762 MCM10Q7L590 875 aa12.67□□□□□ -0.38
SMC4-210ENST00000469762 GOLGA6L22H0YM25 854 aa12.67□□□□□ -0.38
SMC4-210ENST00000469762 CRB1P82279 1406 aa12.66□□□□□ -0.38
SMC4-210ENST00000469762 APBB1O00213 710 aa12.66□□□□□ -0.38
SMC4-210ENST00000469762 PRPF40AO75400 957 aaKnown RBP12.66□□□□□ -0.38
SMC4-210ENST00000469762 LMOD3Q0VAK6 560 aa12.66□□□□□ -0.38
SMC4-210ENST00000469762 EIF4A2Q14240 407 aaKnown RBP12.66□□□□□ -0.38
SMC4-210ENST00000469762 PRR36Q9H6K5 1346 aa12.66□□□□□ -0.38
SMC4-210ENST00000469762 RIMS1Q86UR5 1692 aaKnown RBP12.66□□□□□ -0.38
SMC4-210ENST00000469762 ITSN1Q15811 1721 aa12.66□□□□□ -0.38
SMC4-210ENST00000469762 KIAA0232Q92628 1395 aa12.65□□□□□ -0.38
SMC4-210ENST00000469762 G2E3Q7L622 706 aa12.65□□□□□ -0.38
SMC4-210ENST00000469762 NUDT16Q96DE0 195 aaKnown RBP12.65□□□□□ -0.38
SMC4-210ENST00000469762 OSBPL3Q9H4L5 887 aa12.65□□□□□ -0.38
SMC4-210ENST00000469762 CWC22Q9HCG8 908 aaKnown RBP12.65□□□□□ -0.38
SMC4-210ENST00000469762 SPATA31D1Q6ZQQ2 1576 aa12.65□□□□□ -0.38
SMC4-210ENST00000469762 TPM2P07951 284 aa12.64□□□□□ -0.39
SMC4-210ENST00000469762 SULT6B1Q6IMI4 303 aa12.64□□□□□ -0.39
SMC4-210ENST00000469762 NOL7Q9UMY1 257 aaKnown RBP12.64□□□□□ -0.39
SMC4-210ENST00000469762 TSHZ3Q63HK5 1081 aa12.64□□□□□ -0.39
SMC4-210ENST00000469762 COG3Q96JB2 828 aa12.64□□□□□ -0.39
SMC4-210ENST00000469762 PDE1AP54750 535 aa12.63□□□□□ -0.39
SMC4-210ENST00000469762 PALD1Q9ULE6 856 aa12.63□□□□□ -0.39
SMC4-210ENST00000469762 NALCNQ8IZF0 1738 aa12.63□□□□□ -0.39
SMC4-210ENST00000469762 NCLP19338 710 aaKnown RBP12.63□□□□□ -0.39
SMC4-210ENST00000469762 TXNDC2Q86VQ3 553 aa12.63□□□□□ -0.39
SMC4-210ENST00000469762 MIS18AQ9NYP9 233 aa12.63□□□□□ -0.39
SMC4-210ENST00000469762 PTPRCP08575 1304 aa12.63□□□□□ -0.39
SMC4-210ENST00000469762 ZNF500O60304 480 aaPredicted RBP12.62□□□□□ -0.39
SMC4-210ENST00000469762 HS1BP3Q53T59 392 aa12.62□□□□□ -0.39
SMC4-210ENST00000469762 F6X3S4 739 aa12.62□□□□□ -0.39
SMC4-210ENST00000469762 ERC2O15083 957 aa12.62□□□□□ -0.39
SMC4-210ENST00000469762 TMX3Q96JJ7 454 aa12.62□□□□□ -0.39
SMC4-210ENST00000469762 ST18O60284 1047 aa12.62□□□□□ -0.39
SMC4-210ENST00000469762 IL25Q9H293 177 aa12.62□□□□□ -0.39
SMC4-210ENST00000469762 CCDC61Q9Y6R9 512 aa12.62□□□□□ -0.39
SMC4-210ENST00000469762 OVOS2A0A0J9YW53 1432 aa12.61□□□□□ -0.39
SMC4-210ENST00000469762 OVOS2Q6IE36 1432 aa12.61□□□□□ -0.39
SMC4-210ENST00000469762 XRN1Q8IZH2 1706 aaKnown RBP12.61□□□□□ -0.39
SMC4-210ENST00000469762 SLC4A2P04920 1241 aa12.61□□□□□ -0.39
SMC4-210ENST00000469762 LRSAM1Q6UWE0 723 aa12.61□□□□□ -0.39
SMC4-210ENST00000469762 SYCE3A1L190 88 aa12.61□□□□□ -0.39
SMC4-210ENST00000469762 FOXO3O43524 673 aa12.61□□□□□ -0.39
SMC4-210ENST00000469762 CUL4AQ13619 759 aa12.61□□□□□ -0.39
SMC4-210ENST00000469762 ZMYND15Q9H091 742 aa12.61□□□□□ -0.39
SMC4-210ENST00000469762 BRD1O95696 1058 aa12.61□□□□□ -0.39
SMC4-210ENST00000469762 HSP90AB2PQ58FF8 381 aa12.61□□□□□ -0.39
SMC4-210ENST00000469762 VSIG10Q8N0Z9 540 aa12.61□□□□□ -0.39
SMC4-210ENST00000469762 TECPR2O15040 1411 aa12.6□□□□□ -0.39
SMC4-210ENST00000469762 TCHHQ07283 1943 aa12.6□□□□□ -0.39
SMC4-210ENST00000469762 TOPAZ1Q8N9V7 1692 aa12.6□□□□□ -0.39
SMC4-210ENST00000469762 FOXD4L5Q5VV16 416 aaPredicted RBP12.6□□□□□ -0.39
SMC4-210ENST00000469762 FOXD4L4Q8WXT5 416 aaPredicted RBP12.6□□□□□ -0.39
SMC4-210ENST00000469762 REC8O95072 547 aa12.6□□□□□ -0.39
SMC4-210ENST00000469762 XPCQ01831 940 aaPredicted RBP12.6□□□□□ -0.39
SMC4-210ENST00000469762 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.6□□□□□ -0.39
SMC4-210ENST00000469762 STAG3Q9UJ98 1225 aa12.6□□□□□ -0.39
SMC4-210ENST00000469762 NEK4P51957 841 aa12.59□□□□□ -0.39
SMC4-210ENST00000469762 IL17RAQ96F46 866 aa12.59□□□□□ -0.39
SMC4-210ENST00000469762 EXOC6BQ9Y2D4 811 aa12.59□□□□□ -0.39
SMC4-210ENST00000469762 UNC5CLQ8IV45 518 aa12.59□□□□□ -0.39
SMC4-210ENST00000469762 ESYT1Q9BSJ8 1104 aa12.59□□□□□ -0.39
SMC4-210ENST00000469762 FAM208AQ9UK61 1670 aaKnown RBP12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms