RNA–Protein interactions for RNA: ENST00000467081.1

CCNL1-209, Transcript of cyclin L1, humanhuman

TSL 3

Gene CCNL1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-209ENST00000467081 OSBPL3Q9H4L5 887 aa11.67□□□□□ -0.54
CCNL1-209ENST00000467081 CHIC2Q9UKJ5 165 aa11.67□□□□□ -0.54
CCNL1-209ENST00000467081 SOBPA7XYQ1 873 aa11.66□□□□□ -0.54
CCNL1-209ENST00000467081 SPINT1O43278 529 aa11.66□□□□□ -0.54
CCNL1-209ENST00000467081 SKIP12755 728 aa11.66□□□□□ -0.54
CCNL1-209ENST00000467081 INSM2Q96T92 566 aaPredicted RBP11.66□□□□□ -0.54
CCNL1-209ENST00000467081 USP4Q13107 963 aa11.65□□□□□ -0.54
CCNL1-209ENST00000467081 MAP7D1Q3KQU3 841 aa11.65□□□□□ -0.54
CCNL1-209ENST00000467081 CYP2U1Q7Z449 544 aa11.65□□□□□ -0.54
CCNL1-209ENST00000467081 ZMYND15Q9H091 742 aa11.65□□□□□ -0.54
CCNL1-209ENST00000467081 SOS2Q07890 1332 aaPredicted RBP11.64□□□□□ -0.55
CCNL1-209ENST00000467081 POLMQ9NP87 494 aaPredicted RBP11.64□□□□□ -0.55
CCNL1-209ENST00000467081 ZNF777Q9ULD5 760 aaPredicted RBP11.64□□□□□ -0.55
CCNL1-209ENST00000467081 TTLL8A6PVC2 850 aa11.63□□□□□ -0.55
CCNL1-209ENST00000467081 MAN1A2O60476 641 aa11.63□□□□□ -0.55
CCNL1-209ENST00000467081 CTSOP43234 321 aaPredicted RBP11.63□□□□□ -0.55
CCNL1-209ENST00000467081 UCN2Q96RP3 112 aa11.63□□□□□ -0.55
CCNL1-209ENST00000467081 FIGNL2A6NMB9 653 aa11.62□□□□□ -0.55
CCNL1-209ENST00000467081 NFATC2IPQ8NCF5 419 aa11.62□□□□□ -0.55
CCNL1-209ENST00000467081 CALR3Q96L12 384 aaKnown RBP11.62□□□□□ -0.55
CCNL1-209ENST00000467081 TBC1D9Q6ZT07 1266 aa11.61□□□□□ -0.55
CCNL1-209ENST00000467081 SIRT1Q96EB6 747 aa11.61□□□□□ -0.55
CCNL1-209ENST00000467081 A0A1W2PRU2 124 aa11.6□□□□□ -0.55
CCNL1-209ENST00000467081 MEN1O00255 615 aa11.6□□□□□ -0.55
CCNL1-209ENST00000467081 ARHGEF10LQ9HCE6 1279 aa11.6□□□□□ -0.55
CCNL1-209ENST00000467081 DNMT3LQ9UJW3 386 aa11.6□□□□□ -0.55
CCNL1-209ENST00000467081 DEPDC4Q8N2C3 294 aa11.59□□□□□ -0.55
CCNL1-209ENST00000467081 RAB6BQ9NRW1 208 aa11.59□□□□□ -0.55
CCNL1-209ENST00000467081 USP17L5A8MUK1 530 aa11.58□□□□□ -0.56
CCNL1-209ENST00000467081 NCOA4Q13772 614 aa11.58□□□□□ -0.56
CCNL1-209ENST00000467081 EML3Q32P44 896 aa11.58□□□□□ -0.56
CCNL1-209ENST00000467081 ZNF775Q96BV0 537 aaPredicted RBP11.58□□□□□ -0.56
CCNL1-209ENST00000467081 ATP9BO43861 1147 aa11.57□□□□□ -0.56
CCNL1-209ENST00000467081 GNRH1P01148 92 aa11.57□□□□□ -0.56
CCNL1-209ENST00000467081 FOXD4L5Q5VV16 416 aaPredicted RBP11.57□□□□□ -0.56
CCNL1-209ENST00000467081 C14orf37Q86TY3 774 aa11.57□□□□□ -0.56
CCNL1-209ENST00000467081 STAU1O95793 577 aaKnown RBP11.56□□□□□ -0.56
CCNL1-209ENST00000467081 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.56□□□□□ -0.562e-6■■■□□ 17.1
CCNL1-209ENST00000467081 RNF217Q8TC41 542 aa11.56□□□□□ -0.56
CCNL1-209ENST00000467081 NLRP3Q96P20 1036 aa11.56□□□□□ -0.56
CCNL1-209ENST00000467081 LZTS3O60299 673 aaPredicted RBP11.55□□□□□ -0.56
CCNL1-209ENST00000467081 CLN3Q13286 438 aa11.55□□□□□ -0.56
CCNL1-209ENST00000467081 TFIP11Q9UBB9 837 aaKnown RBP11.55□□□□□ -0.56
CCNL1-209ENST00000467081 NOD1Q9Y239 953 aa11.55□□□□□ -0.56
CCNL1-209ENST00000467081 USP17L3A6NCW0 530 aa11.54□□□□□ -0.56
CCNL1-209ENST00000467081 USP17L4A6NCW7 530 aa11.54□□□□□ -0.56
CCNL1-209ENST00000467081 RNF144AP50876 292 aaPredicted RBP11.54□□□□□ -0.56
CCNL1-209ENST00000467081 USP17L2Q6R6M4 530 aa11.54□□□□□ -0.56
CCNL1-209ENST00000467081 USP17L1Q7RTZ2 530 aa11.54□□□□□ -0.56
CCNL1-209ENST00000467081 IL2RAP01589 272 aa11.53□□□□□ -0.56
CCNL1-209ENST00000467081 PALM3A6NDB9 673 aaPredicted RBP11.52□□□□□ -0.57
CCNL1-209ENST00000467081 PLEKHM2Q8IWE5 1019 aa11.52□□□□□ -0.57
CCNL1-209ENST00000467081 CNKSR1Q969H4 720 aa11.52□□□□□ -0.57
CCNL1-209ENST00000467081 PPP1R12CQ9BZL4 782 aa11.52□□□□□ -0.57
CCNL1-209ENST00000467081 ETNK1Q9HBU6 452 aa11.52□□□□□ -0.57
CCNL1-209ENST00000467081 GTF2IP78347 998 aa11.51□□□□□ -0.57
CCNL1-209ENST00000467081 ESCO1Q5FWF5 840 aa11.51□□□□□ -0.57
CCNL1-209ENST00000467081 SLC27A3Q5K4L6 730 aa11.51□□□□□ -0.57
CCNL1-209ENST00000467081 PRICKLE2Q7Z3G6 844 aa11.51□□□□□ -0.57
CCNL1-209ENST00000467081 ESYT1Q9BSJ8 1104 aa11.51□□□□□ -0.57
CCNL1-209ENST00000467081 NXF1Q9UBU9 619 aaKnown RBP11.51□□□□□ -0.57
CCNL1-209ENST00000467081 PCDHGA11Q9Y5H2 935 aa11.51□□□□□ -0.57
CCNL1-209ENST00000467081 GPC1P35052 558 aa11.5□□□□□ -0.57
CCNL1-209ENST00000467081 LYSMD3Q7Z3D4 306 aa11.5□□□□□ -0.57
CCNL1-209ENST00000467081 XAGE2Q96GT9 111 aa11.5□□□□□ -0.57
CCNL1-209ENST00000467081 MAFBQ9Y5Q3 323 aaPredicted RBP11.5□□□□□ -0.57
CCNL1-209ENST00000467081 TERTO14746 1132 aaKnown RBP11.49□□□□□ -0.57
CCNL1-209ENST00000467081 VEGFBP49765 207 aa11.49□□□□□ -0.57
CCNL1-209ENST00000467081 SCNN1DP51172 638 aa11.49□□□□□ -0.57
CCNL1-209ENST00000467081 GDF10P55107 478 aa11.49□□□□□ -0.57
CCNL1-209ENST00000467081 PSME1Q06323 249 aa11.49□□□□□ -0.57
CCNL1-209ENST00000467081 CENPCQ03188 943 aa11.48□□□□□ -0.57
CCNL1-209ENST00000467081 PTSQ03393 145 aa11.48□□□□□ -0.57
CCNL1-209ENST00000467081 MKRN1Q9UHC7 482 aaKnown RBP11.48□□□□□ -0.57
CCNL1-209ENST00000467081 ARID3CA6NKF2 412 aa11.47□□□□□ -0.57
CCNL1-209ENST00000467081 RHOQP17081 205 aa11.47□□□□□ -0.57
CCNL1-209ENST00000467081 LMOD1P29536 600 aaPredicted RBP11.47□□□□□ -0.57
CCNL1-209ENST00000467081 TRIM50Q86XT4 487 aa11.47□□□□□ -0.57
CCNL1-209ENST00000467081 GRIP2Q9C0E4 1043 aa11.47□□□□□ -0.57
CCNL1-209ENST00000467081 INHAP05111 366 aa11.46□□□□□ -0.57
CCNL1-209ENST00000467081 HRH3Q9Y5N1 445 aa11.46□□□□□ -0.57
CCNL1-209ENST00000467081 POU4F2Q12837 409 aa11.45□□□□□ -0.58
CCNL1-209ENST00000467081 ZSCAN10Q96SZ4 725 aaPredicted RBP11.45□□□□□ -0.58
CCNL1-209ENST00000467081 SERTAD1Q9UHV2 236 aa11.45□□□□□ -0.58
CCNL1-209ENST00000467081 TMEM229AB2RXF0 380 aa11.44□□□□□ -0.58
CCNL1-209ENST00000467081 NFX1Q12986 1120 aaKnown RBP11.44□□□□□ -0.58
CCNL1-209ENST00000467081 TLR1Q15399 786 aa11.44□□□□□ -0.58
CCNL1-209ENST00000467081 PPFIA3O75145 1194 aa11.43□□□□□ -0.58
CCNL1-209ENST00000467081 ATP1A2P50993 1020 aa11.43□□□□□ -0.58
CCNL1-209ENST00000467081 CLDN10P78369 228 aa11.43□□□□□ -0.58
CCNL1-209ENST00000467081 CFAP70Q5T0N1 1121 aa11.43□□□□□ -0.58
CCNL1-209ENST00000467081 OGFOD1Q8N543 542 aa11.43□□□□□ -0.58
CCNL1-209ENST00000467081 CCDC155Q8N6L0 562 aa11.43□□□□□ -0.58
CCNL1-209ENST00000467081 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.43□□□□□ -0.58
CCNL1-209ENST00000467081 FHDC1Q9C0D6 1143 aaPredicted RBP11.43□□□□□ -0.58
CCNL1-209ENST00000467081 DNAAF2Q9NVR5 837 aaKnown RBP11.43□□□□□ -0.58
CCNL1-209ENST00000467081 SENP3-EIF4A1A0A087X0R7 540 aa11.42□□□□□ -0.58
CCNL1-209ENST00000467081 SLC35F4A4IF30 521 aa11.42□□□□□ -0.58
CCNL1-209ENST00000467081 WASLO00401 505 aaPredicted RBP11.42□□□□□ -0.58
CCNL1-209ENST00000467081 ZBTB7BO15156 539 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms