RNA–Protein interactions for RNA: ENST00000466923.5

KPNA1-204, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 3,316 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-204ENST00000466923 KIF20BQ96Q89 1820 aa6.56□□□□□ -1.36
KPNA1-204ENST00000466923 COL5A2P05997 1499 aaPredicted RBP6.56□□□□□ -1.36
KPNA1-204ENST00000466923 EXOC5O00471 708 aa6.56□□□□□ -1.36
KPNA1-204ENST00000466923 APAF1O14727 1248 aa6.56□□□□□ -1.36
KPNA1-204ENST00000466923 IL2RBP14784 551 aa6.56□□□□□ -1.36
KPNA1-204ENST00000466923 PDE3BQ13370 1112 aa6.56□□□□□ -1.36
KPNA1-204ENST00000466923 DDB1Q16531 1140 aa6.56□□□□□ -1.36
KPNA1-204ENST00000466923 THUMPD2Q9BTF0 503 aaKnown RBP6.56□□□□□ -1.36
KPNA1-204ENST00000466923 MPRIPQ6WCQ1 1025 aa6.56□□□□□ -1.36
KPNA1-204ENST00000466923 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.56□□□□□ -1.36
KPNA1-204ENST00000466923 SMG6Q86US8 1419 aaKnown RBP6.56□□□□□ -1.36
KPNA1-204ENST00000466923 SLIT3O75094 1523 aa6.56□□□□□ -1.36
KPNA1-204ENST00000466923 TATP17735 454 aaPredicted RBP6.55□□□□□ -1.36
KPNA1-204ENST00000466923 RBM6P78332 1123 aaKnown RBP6.55□□□□□ -1.36
KPNA1-204ENST00000466923 MTHFSDQ2M296 383 aaKnown RBP6.55□□□□□ -1.36
KPNA1-204ENST00000466923 PEAK1Q9H792 1746 aa6.55□□□□□ -1.36
KPNA1-204ENST00000466923 MARF1Q9Y4F3 1742 aaKnown RBP6.55□□□□□ -1.36
KPNA1-204ENST00000466923 SLIT2O94813 1529 aa6.55□□□□□ -1.36
KPNA1-204ENST00000466923 PTF1AQ7RTS3 328 aa6.55□□□□□ -1.36
KPNA1-204ENST00000466923 LTN1O94822 1766 aa6.55□□□□□ -1.36
KPNA1-204ENST00000466923 MCM10Q7L590 875 aa6.55□□□□□ -1.36
KPNA1-204ENST00000466923 ZCRB1Q8TBF4 217 aaKnown RBP6.55□□□□□ -1.36
KPNA1-204ENST00000466923 MIS18AQ9NYP9 233 aa6.55□□□□□ -1.36
KPNA1-204ENST00000466923 PHRF1Q9P1Y6 1649 aaKnown RBP6.54□□□□□ -1.36
KPNA1-204ENST00000466923 CRB1P82279 1406 aa6.54□□□□□ -1.36
KPNA1-204ENST00000466923 NEFMP07197 916 aa6.54□□□□□ -1.36
KPNA1-204ENST00000466923 ZNF530Q6P9A1 599 aaPredicted RBP6.54□□□□□ -1.36
KPNA1-204ENST00000466923 ILDR2Q71H61 639 aa6.54□□□□□ -1.36
KPNA1-204ENST00000466923 RSPH6AQ9H0K4 717 aa6.54□□□□□ -1.36
KPNA1-204ENST00000466923 LGR6Q9HBX8 967 aa6.54□□□□□ -1.36
KPNA1-204ENST00000466923 TSHZ2Q9NRE2 1034 aa6.54□□□□□ -1.36
KPNA1-204ENST00000466923 LAS1LQ9Y4W2 734 aaKnown RBP6.54□□□□□ -1.36
KPNA1-204ENST00000466923 SHPRHQ149N8 1683 aa6.54□□□□□ -1.36
KPNA1-204ENST00000466923 ABCC6O95255 1503 aa6.54□□□□□ -1.36
KPNA1-204ENST00000466923 IGSF1Q8N6C5 1336 aa6.54□□□□□ -1.36
KPNA1-204ENST00000466923 MAPK8IP3Q9UPT6 1336 aa6.54□□□□□ -1.36
KPNA1-204ENST00000466923 CYP27B1O15528 508 aa6.54□□□□□ -1.36
KPNA1-204ENST00000466923 KCNQ2O43526 872 aa6.54□□□□□ -1.36
KPNA1-204ENST00000466923 FCHSD2O94868 740 aa6.53□□□□□ -1.36
KPNA1-204ENST00000466923 RIPK4P57078 832 aa6.53□□□□□ -1.36
KPNA1-204ENST00000466923 HNRNPUQ00839 825 aaKnown RBP eCLIP6.53□□□□□ -1.36
KPNA1-204ENST00000466923 MARCH10Q8NA82 808 aaPredicted RBP6.53□□□□□ -1.36
KPNA1-204ENST00000466923 BLMP54132 1417 aaPredicted RBP6.53□□□□□ -1.36
KPNA1-204ENST00000466923 KCNQ4P56696 695 aa6.53□□□□□ -1.36
KPNA1-204ENST00000466923 RGPD2P0DJD1 1756 aa6.53□□□□□ -1.36
KPNA1-204ENST00000466923 RTL1A6NKG5 1358 aa6.52□□□□□ -1.36
KPNA1-204ENST00000466923 COL22A1Q8NFW1 1626 aaPredicted RBP6.52□□□□□ -1.37
KPNA1-204ENST00000466923 CCER2I3L3R5 266 aa6.52□□□□□ -1.37
KPNA1-204ENST00000466923 TRIM37O94972 964 aa6.52□□□□□ -1.37
KPNA1-204ENST00000466923 PLEKHO1Q53GL0 409 aaPredicted RBP6.52□□□□□ -1.37
KPNA1-204ENST00000466923 C1orf141Q5JVX7 400 aa6.52□□□□□ -1.37
KPNA1-204ENST00000466923 KRT27Q7Z3Y8 459 aa6.52□□□□□ -1.37
KPNA1-204ENST00000466923 PLEKHF1Q96S99 279 aa6.52□□□□□ -1.37
KPNA1-204ENST00000466923 CDK12Q9NYV4 1490 aaPredicted RBP6.52□□□□□ -1.37
KPNA1-204ENST00000466923 PRIM1P49642 420 aaKnown RBP6.52□□□□□ -1.37
KPNA1-204ENST00000466923 ANKRD26Q9UPS8 1709 aa6.52□□□□□ -1.37
KPNA1-204ENST00000466923 MEGF6O75095 1541 aa6.52□□□□□ -1.37
KPNA1-204ENST00000466923 ABCA3Q99758 1704 aa6.52□□□□□ -1.37
KPNA1-204ENST00000466923 NFATC2IPQ8NCF5 419 aa6.51□□□□□ -1.37
KPNA1-204ENST00000466923 RUNDC1Q96C34 613 aa6.51□□□□□ -1.37
KPNA1-204ENST00000466923 SPG7Q9UQ90 795 aa6.51□□□□□ -1.37
KPNA1-204ENST00000466923 TMPOP42166 694 aaKnown RBP6.51□□□□□ -1.37
KPNA1-204ENST00000466923 RTF1Q92541 710 aaKnown RBP6.51□□□□□ -1.37
KPNA1-204ENST00000466923 PLEKHG2Q9H7P9 1386 aa6.51□□□□□ -1.37
KPNA1-204ENST00000466923 CRYBG1Q9Y4K1 1723 aa6.51□□□□□ -1.37
KPNA1-204ENST00000466923 COL18A1P39060 1754 aa6.51□□□□□ -1.37
KPNA1-204ENST00000466923 SLC39A6Q13433 755 aa6.51□□□□□ -1.37
KPNA1-204ENST00000466923 BARGINQ6ZT62 677 aa6.51□□□□□ -1.37
KPNA1-204ENST00000466923 IL17REQ8NFR9 667 aa6.51□□□□□ -1.37
KPNA1-204ENST00000466923 THRAP3Q9Y2W1 955 aaKnown RBP6.51□□□□□ -1.37
KPNA1-204ENST00000466923 KIF24Q5T7B8 1368 aa6.51□□□□□ -1.37
KPNA1-204ENST00000466923 ELL2O00472 640 aaPredicted RBP6.5□□□□□ -1.37
KPNA1-204ENST00000466923 PHKG2P15735 406 aa6.5□□□□□ -1.37
KPNA1-204ENST00000466923 IFNL2Q8IZJ0 200 aa6.5□□□□□ -1.37
KPNA1-204ENST00000466923 COL14A1Q05707 1796 aaKnown RBP6.5□□□□□ -1.37
KPNA1-204ENST00000466923 COL3A1P02461 1466 aaPredicted RBP6.5□□□□□ -1.37
KPNA1-204ENST00000466923 PTCD1O75127 700 aaKnown RBP6.5□□□□□ -1.37
KPNA1-204ENST00000466923 ATRNO75882 1429 aa6.5□□□□□ -1.37
KPNA1-204ENST00000466923 GNAT3A8MTJ3 354 aa6.5□□□□□ -1.37
KPNA1-204ENST00000466923 ARID3AQ99856 593 aa6.5□□□□□ -1.37
KPNA1-204ENST00000466923 PLCH1Q4KWH8 1693 aa6.49□□□□□ -1.37
KPNA1-204ENST00000466923 LMO7Q8WWI1 1683 aa6.49□□□□□ -1.37
KPNA1-204ENST00000466923 ONECUT3O60422 494 aaPredicted RBP6.49□□□□□ -1.37
KPNA1-204ENST00000466923 AMOTQ4VCS5 1084 aa6.49□□□□□ -1.37
KPNA1-204ENST00000466923 CDCA7LQ96GN5 454 aa6.49□□□□□ -1.37
KPNA1-204ENST00000466923 KCNQ3O43525 872 aa6.49□□□□□ -1.37
KPNA1-204ENST00000466923 CABP4P57796 275 aa6.49□□□□□ -1.37
KPNA1-204ENST00000466923 TEFQ10587 303 aa6.49□□□□□ -1.37
KPNA1-204ENST00000466923 NFE2L2Q16236 605 aa6.49□□□□□ -1.37
KPNA1-204ENST00000466923 KDRP35968 1356 aa6.49□□□□□ -1.37
KPNA1-204ENST00000466923 DEFB132Q7Z7B7 95 aa6.48□□□□□ -1.37
KPNA1-204ENST00000466923 GAS2L2Q8NHY3 880 aa6.48□□□□□ -1.37
KPNA1-204ENST00000466923 ASAP1Q9ULH1 1129 aa6.48□□□□□ -1.37
KPNA1-204ENST00000466923 TRIM35Q9UPQ4 493 aa6.48□□□□□ -1.37
KPNA1-204ENST00000466923 KRT24Q2M2I5 525 aa6.48□□□□□ -1.37
KPNA1-204ENST00000466923 NECTIN2Q92692 538 aa6.48□□□□□ -1.37
KPNA1-204ENST00000466923 TSR2Q969E8 191 aaKnown RBP6.48□□□□□ -1.37
KPNA1-204ENST00000466923 PNNQ9H307 717 aaKnown RBP6.48□□□□□ -1.37
KPNA1-204ENST00000466923 SPINK5Q9NQ38 1064 aaPredicted RBP6.48□□□□□ -1.37
KPNA1-204ENST00000466923 PCDH11XQ9BZA7 1347 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms