RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 SYTL4Q96C24 671 aaPredicted RBP16.7■□□□□ 0.26
GTF3A-205ENST00000466776 TUBGCP6Q96RT7 1819 aa16.7■□□□□ 0.26
GTF3A-205ENST00000466776 TRIM26Q12899 539 aaPredicted RBP16.69■□□□□ 0.26
GTF3A-205ENST00000466776 ZCRB1Q8TBF4 217 aaKnown RBP16.69■□□□□ 0.26
GTF3A-205ENST00000466776 FHDC1Q9C0D6 1143 aaPredicted RBP16.69■□□□□ 0.26
GTF3A-205ENST00000466776 CGNL1Q0VF96 1302 aa16.69■□□□□ 0.26
GTF3A-205ENST00000466776 SLC16A10Q8TF71 515 aa16.68■□□□□ 0.26
GTF3A-205ENST00000466776 ARXQ96QS3 562 aa16.68■□□□□ 0.26
GTF3A-205ENST00000466776 SYT17Q9BSW7 474 aa16.68■□□□□ 0.26
GTF3A-205ENST00000466776 HMGB2P26583 209 aaKnown RBP16.67■□□□□ 0.26
GTF3A-205ENST00000466776 RAPGEF4Q8WZA2 1011 aa16.67■□□□□ 0.26
GTF3A-205ENST00000466776 COL24A1Q17RW2 1714 aa16.67■□□□□ 0.26
GTF3A-205ENST00000466776 KIF24Q5T7B8 1368 aa16.66■□□□□ 0.26
GTF3A-205ENST00000466776 MEGF6O75095 1541 aa16.66■□□□□ 0.26
GTF3A-205ENST00000466776 ZNF827Q17R98 1081 aa16.66■□□□□ 0.26
GTF3A-205ENST00000466776 SGIP1Q9BQI5 828 aa16.66■□□□□ 0.26
GTF3A-205ENST00000466776 GGNBP2Q9H3C7 697 aa16.66■□□□□ 0.26
GTF3A-205ENST00000466776 LRRC4BQ9NT99 713 aa16.66■□□□□ 0.26
GTF3A-205ENST00000466776 MAP3K5Q99683 1374 aa16.65■□□□□ 0.26
GTF3A-205ENST00000466776 FYB1O15117 783 aa16.65■□□□□ 0.26
GTF3A-205ENST00000466776 POLD1P28340 1107 aa16.65■□□□□ 0.26
GTF3A-205ENST00000466776 PRIM1P49642 420 aaKnown RBP16.65■□□□□ 0.26
GTF3A-205ENST00000466776 RRS1Q15050 365 aaKnown RBP16.65■□□□□ 0.26
GTF3A-205ENST00000466776 FLT4P35916 1363 aa16.64■□□□□ 0.26
GTF3A-205ENST00000466776 FBLN1P23142 703 aa16.64■□□□□ 0.25
GTF3A-205ENST00000466776 AKT1S1Q96B36 256 aa16.64■□□□□ 0.25
GTF3A-205ENST00000466776 RNF39Q9H2S5 420 aa16.64■□□□□ 0.25
GTF3A-205ENST00000466776 TFCP2L1Q9NZI6 479 aa16.64■□□□□ 0.25
GTF3A-205ENST00000466776 MAP2P11137 1827 aaKnown RBP16.63■□□□□ 0.25
GTF3A-205ENST00000466776 TATP17735 454 aaPredicted RBP16.63■□□□□ 0.25
GTF3A-205ENST00000466776 INSRP06213 1382 aa16.63■□□□□ 0.25
GTF3A-205ENST00000466776 C5P01031 1676 aa16.62■□□□□ 0.25
GTF3A-205ENST00000466776 ITGB4P16144 1822 aa16.62■□□□□ 0.25
GTF3A-205ENST00000466776 NBPF6Q5VWK0 638 aa16.62■□□□□ 0.25
GTF3A-205ENST00000466776 NBPF4Q96M43 638 aa16.62■□□□□ 0.25
GTF3A-205ENST00000466776 PCDH11XQ9BZA7 1347 aa16.62■□□□□ 0.25
GTF3A-205ENST00000466776 PCDH11YQ9BZA8 1340 aa16.62■□□□□ 0.25
GTF3A-205ENST00000466776 TAF1LQ8IZX4 1826 aa16.61■□□□□ 0.25
GTF3A-205ENST00000466776 CCNL1Q9UK58 526 aaPredicted RBP16.61■□□□□ 0.25
GTF3A-205ENST00000466776 ANKRD26Q9UPS8 1709 aa16.61■□□□□ 0.25
GTF3A-205ENST00000466776 NSD2O96028 1365 aa16.61■□□□□ 0.25
GTF3A-205ENST00000466776 PKD1L3Q7Z443 1732 aa16.6■□□□□ 0.25
GTF3A-205ENST00000466776 KLHL34Q8N239 644 aa16.6■□□□□ 0.25
GTF3A-205ENST00000466776 USHBP1Q8N6Y0 703 aa16.6■□□□□ 0.25
GTF3A-205ENST00000466776 TIMELESSQ9UNS1 1208 aa16.6■□□□□ 0.25
GTF3A-205ENST00000466776 PNPLA7Q6ZV29 1317 aa16.6■□□□□ 0.25
GTF3A-205ENST00000466776 NSD3Q9BZ95 1437 aa16.59■□□□□ 0.25
GTF3A-205ENST00000466776 HSP90AB2PQ58FF8 381 aa16.58■□□□□ 0.24
GTF3A-205ENST00000466776 KCNQ4P56696 695 aa16.57■□□□□ 0.24
GTF3A-205ENST00000466776 GPR162Q16538 588 aa16.57■□□□□ 0.24
GTF3A-205ENST00000466776 TOGARAM1Q9Y4F4 1720 aa16.56■□□□□ 0.24
GTF3A-205ENST00000466776 CLSPNQ9HAW4 1339 aa16.55■□□□□ 0.24
GTF3A-205ENST00000466776 ZNF784Q8NCA9 323 aaPredicted RBP16.55■□□□□ 0.24
GTF3A-205ENST00000466776 FLAD1Q8NFF5 587 aa16.55■□□□□ 0.24
GTF3A-205ENST00000466776 PPM1GO15355 546 aaPredicted RBP16.54■□□□□ 0.24
GTF3A-205ENST00000466776 SMARCC1Q92922 1105 aaPredicted RBP16.54■□□□□ 0.24
GTF3A-205ENST00000466776 PALLDQ8WX93 1383 aa16.53■□□□□ 0.24
GTF3A-205ENST00000466776 MPRIPQ6WCQ1 1025 aa16.53■□□□□ 0.24
GTF3A-205ENST00000466776 PELP1Q8IZL8 1130 aaKnown RBP16.53■□□□□ 0.24
GTF3A-205ENST00000466776 SPG7Q9UQ90 795 aa16.53■□□□□ 0.24
GTF3A-205ENST00000466776 C4BP0C0L5 1744 aa16.53■□□□□ 0.24
GTF3A-205ENST00000466776 CARD14Q9BXL6 1004 aa16.52■□□□□ 0.24
GTF3A-205ENST00000466776 EMILIN1Q9Y6C2 1016 aa16.52■□□□□ 0.24
GTF3A-205ENST00000466776 UBR3Q6ZT12 1888 aa16.52■□□□□ 0.23
GTF3A-205ENST00000466776 UTRNP46939 3433 aa16.51■□□□□ 0.23
GTF3A-205ENST00000466776 NCAPD2Q15021 1401 aa16.51■□□□□ 0.23
GTF3A-205ENST00000466776 WASHC2AQ641Q2 1341 aa16.5■□□□□ 0.23
GTF3A-205ENST00000466776 CYP27B1O15528 508 aa16.5■□□□□ 0.23
GTF3A-205ENST00000466776 COL23A1Q86Y22 540 aaPredicted RBP16.5■□□□□ 0.23
GTF3A-205ENST00000466776 AK7Q96M32 723 aa16.49■□□□□ 0.23
GTF3A-205ENST00000466776 POLR3GLQ9BT43 218 aa16.49■□□□□ 0.23
GTF3A-205ENST00000466776 GRIN3BO60391 1043 aa16.48■□□□□ 0.23
GTF3A-205ENST00000466776 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.48■□□□□ 0.232e-7■□□□□ 11.1
GTF3A-205ENST00000466776 NKX1-1Q15270 411 aaPredicted RBP16.47■□□□□ 0.23
GTF3A-205ENST00000466776 PLEKHG2Q9H7P9 1386 aa16.47■□□□□ 0.23
GTF3A-205ENST00000466776 MSL1Q68DK7 614 aa16.46■□□□□ 0.23
GTF3A-205ENST00000466776 NLGN2Q8NFZ4 835 aa16.46■□□□□ 0.23
GTF3A-205ENST00000466776 PCGF6Q9BYE7 350 aa16.46■□□□□ 0.23
GTF3A-205ENST00000466776 TMOD3Q9NYL9 352 aa16.46■□□□□ 0.23
GTF3A-205ENST00000466776 IFNL2Q8IZJ0 200 aa16.45■□□□□ 0.22
GTF3A-205ENST00000466776 EYA1Q99502 592 aa16.45■□□□□ 0.22
GTF3A-205ENST00000466776 HOXD11P31277 338 aaPredicted RBP16.44■□□□□ 0.22
GTF3A-205ENST00000466776 PIGBQ92521 554 aa16.44■□□□□ 0.22
GTF3A-205ENST00000466776 POLKQ9UBT6 870 aa16.44■□□□□ 0.22
GTF3A-205ENST00000466776 CD2APQ9Y5K6 639 aa16.44■□□□□ 0.22
GTF3A-205ENST00000466776 EIF4G2P78344 907 aaKnown RBP eCLIP16.43■□□□□ 0.22
GTF3A-205ENST00000466776 LOC102724428A0A0B4J2F2 783 aa16.42■□□□□ 0.22
GTF3A-205ENST00000466776 PHF14O94880 888 aa16.42■□□□□ 0.22
GTF3A-205ENST00000466776 SSFA2P28290 1259 aa16.42■□□□□ 0.22
GTF3A-205ENST00000466776 SIK1P57059 783 aa16.42■□□□□ 0.22
GTF3A-205ENST00000466776 ZNF831Q5JPB2 1677 aa16.41■□□□□ 0.22
GTF3A-205ENST00000466776 GIGYF1O75420 1035 aaPredicted RBP16.41■□□□□ 0.22
GTF3A-205ENST00000466776 HSP90AB1P08238 724 aaKnown RBP16.41■□□□□ 0.22
GTF3A-205ENST00000466776 PHKG2P15735 406 aa16.41■□□□□ 0.22
GTF3A-205ENST00000466776 TNNT2P45379 298 aaPredicted RBP16.41■□□□□ 0.22
GTF3A-205ENST00000466776 C1QTNF8P60827 252 aa16.41■□□□□ 0.22
GTF3A-205ENST00000466776 GOLGB1Q14789 3259 aaKnown RBP16.41■□□□□ 0.22
GTF3A-205ENST00000466776 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.4■□□□□ 0.22
GTF3A-205ENST00000466776 EIF4A2Q14240 407 aaKnown RBP16.4■□□□□ 0.22
GTF3A-205ENST00000466776 SENP3-EIF4A1A0A087X0R7 540 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms