RNA–Protein interactions for RNA: ENST00000461044.5

FXR1-204, Transcript of FMR1 autosomal homolog 1, human

TSL 4

Gene FXR1, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-204	ENST00000461044	C1orf115	Q9H7X2	142 aa		5.74	□□□□□ -1.49
FXR1-204	ENST00000461044	PCDHB11	Q9Y5F2	797 aa		5.74	□□□□□ -1.49
FXR1-204	ENST00000461044	FIGNL2	A6NMB9	653 aa		5.73	□□□□□ -1.49
FXR1-204	ENST00000461044	POM121C	A8CG34	1229 aa		5.73	□□□□□ -1.49
FXR1-204	ENST00000461044	UPP2	O95045	317 aa		5.73	□□□□□ -1.49
FXR1-204	ENST00000461044	VEGFB	P49765	207 aa		5.73	□□□□□ -1.49
FXR1-204	ENST00000461044	FOXD4L5	Q5VV16	416 aa	Predicted RBP	5.73	□□□□□ -1.49
FXR1-204	ENST00000461044	CC2D2B	Q6DHV5	1058 aa		5.73	□□□□□ -1.49
FXR1-204	ENST00000461044	FNBP4	Q8N3X1	1017 aa	Predicted RBP	5.73	□□□□□ -1.49
FXR1-204	ENST00000461044	ADAMTS19	Q8TE59	1207 aa		5.73	□□□□□ -1.49
FXR1-204	ENST00000461044	CLUAP1	Q96AJ1	413 aa		5.73	□□□□□ -1.49
FXR1-204	ENST00000461044	NXF1	Q9UBU9	619 aa	Known RBP	5.73	□□□□□ -1.49
FXR1-204	ENST00000461044	PIK3CD	O00329	1044 aa		5.72	□□□□□ -1.49
FXR1-204	ENST00000461044	MAN1A2	O60476	641 aa		5.72	□□□□□ -1.49
FXR1-204	ENST00000461044	WFS1	O76024	890 aa		5.72	□□□□□ -1.49
FXR1-204	ENST00000461044	RNF217	Q8TC41	542 aa		5.72	□□□□□ -1.49
FXR1-204	ENST00000461044	ZNF592	Q92610	1267 aa		5.72	□□□□□ -1.49
FXR1-204	ENST00000461044		A0A1W2PRU2	124 aa		5.71	□□□□□ -1.5
FXR1-204	ENST00000461044	ATP5J2-PTCD1	G3V325	749 aa		5.71	□□□□□ -1.5
FXR1-204	ENST00000461044		H3BM21	787 aa		5.71	□□□□□ -1.5
FXR1-204	ENST00000461044	RANGAP1	P46060	587 aa	Predicted RBP	5.71	□□□□□ -1.5
FXR1-204	ENST00000461044	SOX11	P35716	441 aa		5.7	□□□□□ -1.5
FXR1-204	ENST00000461044	RNF144A	P50876	292 aa	Predicted RBP	5.7	□□□□□ -1.5
FXR1-204	ENST00000461044	SEMA3F	Q13275	785 aa		5.7	□□□□□ -1.5
FXR1-204	ENST00000461044	NPM2	Q86SE8	214 aa	Known RBP	5.7	□□□□□ -1.5
FXR1-204	ENST00000461044	RNF135	Q8IUD6	432 aa		5.7	□□□□□ -1.5
FXR1-204	ENST00000461044	NPAS3	Q8IXF0	933 aa		5.7	□□□□□ -1.5
FXR1-204	ENST00000461044	ERBB4	Q15303	1308 aa		5.7	□□□□□ -1.5
FXR1-204	ENST00000461044	SENP3-EIF4A1	A0A087X0R7	540 aa		5.69	□□□□□ -1.5
FXR1-204	ENST00000461044	RAD21	O60216	631 aa		5.69	□□□□□ -1.5
FXR1-204	ENST00000461044	PPFIA3	O75145	1194 aa		5.69	□□□□□ -1.5
FXR1-204	ENST00000461044	STAU1	O95793	577 aa	Known RBP	5.69	□□□□□ -1.5
FXR1-204	ENST00000461044	PTS	Q03393	145 aa		5.69	□□□□□ -1.5
FXR1-204	ENST00000461044	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	5.69	□□□□□ -1.5
FXR1-204	ENST00000461044	SLFNL1	Q499Z3	407 aa		5.69	□□□□□ -1.5
FXR1-204	ENST00000461044	POLM	Q9NP87	494 aa	Predicted RBP	5.69	□□□□□ -1.5
FXR1-204	ENST00000461044	HRH3	Q9Y5N1	445 aa		5.69	□□□□□ -1.5
FXR1-204	ENST00000461044	SLC35F4	A4IF30	521 aa		5.68	□□□□□ -1.5
FXR1-204	ENST00000461044	ARID3C	A6NKF2	412 aa		5.68	□□□□□ -1.5
FXR1-204	ENST00000461044	IL2RA	P01589	272 aa		5.68	□□□□□ -1.5
FXR1-204	ENST00000461044	PLPP7	Q8NBV4	271 aa		5.68	□□□□□ -1.5
FXR1-204	ENST00000461044	GRIP2	Q9C0E4	1043 aa		5.68	□□□□□ -1.5
FXR1-204	ENST00000461044	DOLK	Q9UPQ8	538 aa		5.68	□□□□□ -1.5
FXR1-204	ENST00000461044		A6NJR5	290 aa		5.67	□□□□□ -1.5
FXR1-204	ENST00000461044	MEN1	O00255	615 aa		5.67	□□□□□ -1.5
FXR1-204	ENST00000461044	CLN3	Q13286	438 aa		5.67	□□□□□ -1.5
FXR1-204	ENST00000461044	HDGFL1	Q5TGJ6	251 aa		5.67	□□□□□ -1.5
FXR1-204	ENST00000461044	CYP2U1	Q7Z449	544 aa		5.67	□□□□□ -1.5
FXR1-204	ENST00000461044	XAGE2	Q96GT9	111 aa		5.67	□□□□□ -1.5
FXR1-204	ENST00000461044	UCN2	Q96RP3	112 aa		5.67	□□□□□ -1.5
FXR1-204	ENST00000461044	ARHGEF10L	Q9HCE6	1279 aa		5.67	□□□□□ -1.5
FXR1-204	ENST00000461044	RAB6B	Q9NRW1	208 aa		5.67	□□□□□ -1.5
FXR1-204	ENST00000461044	WIPF1	O43516	503 aa		5.66	□□□□□ -1.5
FXR1-204	ENST00000461044	GNRH1	P01148	92 aa		5.66	□□□□□ -1.5
FXR1-204	ENST00000461044	GPC1	P35052	558 aa		5.66	□□□□□ -1.5
FXR1-204	ENST00000461044	GMPR	P36959	345 aa		5.66	□□□□□ -1.5
FXR1-204	ENST00000461044	USP4	Q13107	963 aa		5.66	□□□□□ -1.5
FXR1-204	ENST00000461044	MAP7D1	Q3KQU3	841 aa		5.66	□□□□□ -1.5
FXR1-204	ENST00000461044	OXLD1	Q5BKU9	147 aa		5.66	□□□□□ -1.5
FXR1-204	ENST00000461044	PROSER2	Q86WR7	435 aa	Predicted RBP	5.66	□□□□□ -1.5
FXR1-204	ENST00000461044	CCDC155	Q8N6L0	562 aa		5.66	□□□□□ -1.5
FXR1-204	ENST00000461044	GPR161	Q8N6U8	529 aa	Known RBP	5.66	□□□□□ -1.5
FXR1-204	ENST00000461044	VSIG8	P0DPA2	414 aa		5.65	□□□□□ -1.5
FXR1-204	ENST00000461044	LOR	P23490	312 aa	Predicted RBP	5.65	□□□□□ -1.5
FXR1-204	ENST00000461044	SCNN1D	P51172	638 aa		5.65	□□□□□ -1.5
FXR1-204	ENST00000461044	CENPC	Q03188	943 aa		5.65	□□□□□ -1.5
FXR1-204	ENST00000461044	TBC1D9	Q6ZT07	1266 aa		5.65	□□□□□ -1.5
FXR1-204	ENST00000461044	LYSMD3	Q7Z3D4	306 aa		5.65	□□□□□ -1.5
FXR1-204	ENST00000461044	PRICKLE2	Q7Z3G6	844 aa		5.65	□□□□□ -1.5
FXR1-204	ENST00000461044	SLC16A10	Q8TF71	515 aa		5.65	□□□□□ -1.5
FXR1-204	ENST00000461044	CNKSR1	Q969H4	720 aa		5.65	□□□□□ -1.5
FXR1-204	ENST00000461044	TRIM52	Q96A61	297 aa		5.65	□□□□□ -1.5
FXR1-204	ENST00000461044	FHDC1	Q9C0D6	1143 aa	Predicted RBP	5.65	□□□□□ -1.5
FXR1-204	ENST00000461044	ETNK1	Q9HBU6	452 aa		5.65	□□□□□ -1.5
FXR1-204	ENST00000461044	PCDHGA11	Q9Y5H2	935 aa		5.65	□□□□□ -1.5
FXR1-204	ENST00000461044	MYC	P01106	439 aa	Predicted RBP	5.64	□□□□□ -1.51
FXR1-204	ENST00000461044	SKI	P12755	728 aa		5.64	□□□□□ -1.51
FXR1-204	ENST00000461044	RHOQ	P17081	205 aa		5.64	□□□□□ -1.51
FXR1-204	ENST00000461044	POU4F2	Q12837	409 aa		5.64	□□□□□ -1.51
FXR1-204	ENST00000461044	NFATC2IP	Q8NCF5	419 aa		5.64	□□□□□ -1.51
FXR1-204	ENST00000461044	ESYT1	Q9BSJ8	1104 aa		5.64	□□□□□ -1.51
FXR1-204	ENST00000461044	CUEDC1	Q9NWM3	386 aa	Predicted RBP	5.64	□□□□□ -1.51
FXR1-204	ENST00000461044	TMEM229A	B2RXF0	380 aa		5.63	□□□□□ -1.51
FXR1-204	ENST00000461044	SPATA31C2	B4DYI2	1134 aa		5.63	□□□□□ -1.51
FXR1-204	ENST00000461044	WWC1	Q8IX03	1113 aa		5.63	□□□□□ -1.51
FXR1-204	ENST00000461044	DEPDC4	Q8N2C3	294 aa		5.63	□□□□□ -1.51
FXR1-204	ENST00000461044	NANOS1	Q8WY41	292 aa	Known RBP	5.63	□□□□□ -1.51
FXR1-204	ENST00000461044	IRF7	Q92985	503 aa		5.63	□□□□□ -1.51
FXR1-204	ENST00000461044	NLRP3	Q96P20	1036 aa		5.63	□□□□□ -1.51
FXR1-204	ENST00000461044	ZBTB7B	O15156	539 aa	Predicted RBP	5.62	□□□□□ -1.51
FXR1-204	ENST00000461044	ITGA6	P23229	1130 aa		5.62	□□□□□ -1.51
FXR1-204	ENST00000461044	NCOA4	Q13772	614 aa		5.62	□□□□□ -1.51
FXR1-204	ENST00000461044	NBPF10	Q6P3W6	841 aa	Known RBP	5.62	□□□□□ -1.51
FXR1-204	ENST00000461044	NBPF15	Q8N660	670 aa		5.62	□□□□□ -1.51
FXR1-204	ENST00000461044	ESF1	Q9H501	851 aa	Known RBP	5.62	□□□□□ -1.51
FXR1-204	ENST00000461044	USP17L5	A8MUK1	530 aa		5.61	□□□□□ -1.51
FXR1-204	ENST00000461044	INHA	P05111	366 aa		5.61	□□□□□ -1.51
FXR1-204	ENST00000461044	GDF10	P55107	478 aa		5.61	□□□□□ -1.51
FXR1-204	ENST00000461044	KRT76	Q01546	638 aa		5.61	□□□□□ -1.51
FXR1-204	ENST00000461044	ZNF295-AS1	Q8N0V1	137 aa		5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms