RNA–Protein interactions for RNA: ENST00000459706.1

DDX1-204, Transcript of DEAD-box helicase 1, humanhuman

TSL 3

Gene DDX1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-204ENST00000459706 WDR62O43379 1518 aa9.17□□□□□ -0.94
DDX1-204ENST00000459706 RPIAP49247 311 aa9.17□□□□□ -0.94
DDX1-204ENST00000459706 TMEM164Q5U3C3 297 aa9.17□□□□□ -0.94
DDX1-204ENST00000459706 OGFOD1Q8N543 542 aa9.17□□□□□ -0.94
DDX1-204ENST00000459706 CLP1Q92989 425 aaKnown RBP9.17□□□□□ -0.94
DDX1-204ENST00000459706 CARD14Q9BXL6 1004 aa9.17□□□□□ -0.94
DDX1-204ENST00000459706 RBM19Q9Y4C8 960 aaKnown RBP9.17□□□□□ -0.94
DDX1-204ENST00000459706 MAP4K5Q9Y4K4 846 aa9.17□□□□□ -0.94
DDX1-204ENST00000459706 THOC2Q8NI27 1593 aaKnown RBP9.16□□□□□ -0.94
DDX1-204ENST00000459706 URB2Q14146 1524 aaKnown RBP9.16□□□□□ -0.94
DDX1-204ENST00000459706 EEA1Q15075 1411 aa9.16□□□□□ -0.94
DDX1-204ENST00000459706 GIGYF1O75420 1035 aaPredicted RBP9.16□□□□□ -0.94
DDX1-204ENST00000459706 SH3BP2P78314 561 aa9.16□□□□□ -0.94
DDX1-204ENST00000459706 CRTC2Q53ET0 693 aaPredicted RBP9.16□□□□□ -0.94
DDX1-204ENST00000459706 CCER1Q8TC90 406 aaPredicted RBP9.16□□□□□ -0.94
DDX1-204ENST00000459706 FOXJ1Q92949 421 aa9.16□□□□□ -0.94
DDX1-204ENST00000459706 DNAAF2Q9NVR5 837 aaKnown RBP9.16□□□□□ -0.94
DDX1-204ENST00000459706 SIX5Q8N196 739 aa9.15□□□□□ -0.94
DDX1-204ENST00000459706 FGD5Q6ZNL6 1462 aa9.15□□□□□ -0.95
DDX1-204ENST00000459706 ARID4AP29374 1257 aaPredicted RBP9.14□□□□□ -0.95
DDX1-204ENST00000459706 LINC01559Q495D7 138 aa9.14□□□□□ -0.95
DDX1-204ENST00000459706 C4orf48Q5BLP8 95 aa9.14□□□□□ -0.95
DDX1-204ENST00000459706 MPNDQ8N594 471 aa9.14□□□□□ -0.95
DDX1-204ENST00000459706 CCDC85AQ96PX6 553 aaPredicted RBP9.14□□□□□ -0.95
DDX1-204ENST00000459706 SSFA2P28290 1259 aa9.13□□□□□ -0.95
DDX1-204ENST00000459706 RANGAP1P46060 587 aaPredicted RBP9.13□□□□□ -0.95
DDX1-204ENST00000459706 TRIM32Q13049 653 aa9.13□□□□□ -0.95
DDX1-204ENST00000459706 C1orf216Q8TAB5 229 aa9.13□□□□□ -0.95
DDX1-204ENST00000459706 STK32AQ8WU08 396 aa9.13□□□□□ -0.95
DDX1-204ENST00000459706 WDR97A6NE52 1622 aa9.13□□□□□ -0.95
DDX1-204ENST00000459706 RNF223E7ERA6 249 aa9.12□□□□□ -0.95
DDX1-204ENST00000459706 ZBTB7BO15156 539 aaPredicted RBP9.12□□□□□ -0.95
DDX1-204ENST00000459706 CD2BP2O95400 341 aaKnown RBP9.12□□□□□ -0.95
DDX1-204ENST00000459706 SEC13P55735 322 aa9.12□□□□□ -0.95
DDX1-204ENST00000459706 FAM69CQ0P6D2 419 aa9.12□□□□□ -0.95
DDX1-204ENST00000459706 MTMR7Q9Y216 660 aa9.12□□□□□ -0.95
DDX1-204ENST00000459706 POLA1P09884 1462 aaPredicted RBP9.12□□□□□ -0.95
DDX1-204ENST00000459706 MFAP1P55081 439 aaKnown RBP9.11□□□□□ -0.95
DDX1-204ENST00000459706 GTF2IP78347 998 aa9.11□□□□□ -0.95
DDX1-204ENST00000459706 CLDN10P78369 228 aa9.11□□□□□ -0.95
DDX1-204ENST00000459706 DPYDQ12882 1025 aa9.11□□□□□ -0.95
DDX1-204ENST00000459706 TSGA10IPQ3SY00 556 aa9.11□□□□□ -0.95
DDX1-204ENST00000459706 TXNDC2Q86VQ3 553 aa9.11□□□□□ -0.95
DDX1-204ENST00000459706 KCTD15Q96SI1 283 aaPredicted RBP9.11□□□□□ -0.95
DDX1-204ENST00000459706 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.11□□□□□ -0.95
DDX1-204ENST00000459706 IVNS1ABPQ9Y6Y0 642 aa9.11□□□□□ -0.95
DDX1-204ENST00000459706 M0R2N6 131 aa9.1□□□□□ -0.95
DDX1-204ENST00000459706 MYCP01106 439 aaPredicted RBP9.1□□□□□ -0.95
DDX1-204ENST00000459706 OXLD1Q5BKU9 147 aa9.1□□□□□ -0.95
DDX1-204ENST00000459706 CCDC102BQ68D86 513 aa9.1□□□□□ -0.95
DDX1-204ENST00000459706 SND1Q7KZF4 910 aaKnown RBP eCLIP9.1□□□□□ -0.95
DDX1-204ENST00000459706 NPM2Q86SE8 214 aaKnown RBP9.1□□□□□ -0.95
DDX1-204ENST00000459706 ABCA10Q8WWZ4 1543 aa9.1□□□□□ -0.95
DDX1-204ENST00000459706 KIF27Q86VH2 1401 aa9.09□□□□□ -0.95
DDX1-204ENST00000459706 CARNS1A5YM72 827 aa9.09□□□□□ -0.95
DDX1-204ENST00000459706 DKK1O94907 266 aa9.09□□□□□ -0.95
DDX1-204ENST00000459706 DHX9Q08211 1270 aaKnown RBP9.09□□□□□ -0.95
DDX1-204ENST00000459706 RNF166Q96A37 237 aaPredicted RBP9.09□□□□□ -0.95
DDX1-204ENST00000459706 CDK15Q96Q40 435 aa9.09□□□□□ -0.95
DDX1-204ENST00000459706 PCDHB11Q9Y5F2 797 aa9.09□□□□□ -0.95
DDX1-204ENST00000459706 PCDHGA11Q9Y5H2 935 aa9.09□□□□□ -0.95
DDX1-204ENST00000459706 SOGA1O94964 1423 aa9.08□□□□□ -0.96
DDX1-204ENST00000459706 VASH1Q7L8A9 365 aaPredicted RBP9.08□□□□□ -0.96
DDX1-204ENST00000459706 ESF1Q9H501 851 aaKnown RBP9.08□□□□□ -0.96
DDX1-204ENST00000459706 TARBP1Q13395 1621 aaKnown RBP9.08□□□□□ -0.96
DDX1-204ENST00000459706 IFT140Q96RY7 1462 aa9.08□□□□□ -0.96
DDX1-204ENST00000459706 PPEF1O14829 653 aaPredicted RBP9.07□□□□□ -0.96
DDX1-204ENST00000459706 CCDC27Q2M243 656 aa9.07□□□□□ -0.96
DDX1-204ENST00000459706 IFFO2Q5TF58 517 aa9.07□□□□□ -0.96
DDX1-204ENST00000459706 PHLDB3Q6NSJ2 640 aa9.07□□□□□ -0.96
DDX1-204ENST00000459706 RGS22Q8NE09 1264 aa9.07□□□□□ -0.96
DDX1-204ENST00000459706 ZNF594Q96JF6 807 aaPredicted RBP9.07□□□□□ -0.96
DDX1-204ENST00000459706 ATP2B4P23634 1241 aa9.06□□□□□ -0.96
DDX1-204ENST00000459706 ABCA5Q8WWZ7 1642 aa9.05□□□□□ -0.96
DDX1-204ENST00000459706 CUX2O14529 1486 aa9.05□□□□□ -0.96
DDX1-204ENST00000459706 PPP1R18Q6NYC8 613 aa9.05□□□□□ -0.96
DDX1-204ENST00000459706 EHBP1Q8NDI1 1231 aa9.05□□□□□ -0.96
DDX1-204ENST00000459706 ERCC3P19447 782 aa9.04□□□□□ -0.96
DDX1-204ENST00000459706 ERVK-9P63128 1117 aa9.04□□□□□ -0.96
DDX1-204ENST00000459706 SKOR1P84550 965 aa9.04□□□□□ -0.96
DDX1-204ENST00000459706 PSME1Q06323 249 aa9.04□□□□□ -0.96
DDX1-204ENST00000459706 INTS6LQ5JSJ4 861 aaKnown RBP9.04□□□□□ -0.96
DDX1-204ENST00000459706 TPCN2Q8NHX9 752 aa9.04□□□□□ -0.96
DDX1-204ENST00000459706 CUL7Q14999 1698 aa9.04□□□□□ -0.96
DDX1-204ENST00000459706 RAD54L2Q9Y4B4 1467 aa9.03□□□□□ -0.96
DDX1-204ENST00000459706 KIF21BO75037 1637 aa9.03□□□□□ -0.96
DDX1-204ENST00000459706 WASLO00401 505 aaPredicted RBP9.03□□□□□ -0.96
DDX1-204ENST00000459706 NR5A1Q13285 461 aa9.03□□□□□ -0.96
DDX1-204ENST00000459706 RC3H1Q5TC82 1133 aaKnown RBP9.03□□□□□ -0.96
DDX1-204ENST00000459706 CC2D2BQ6DHV5 1058 aa9.03□□□□□ -0.96
DDX1-204ENST00000459706 AMOTL2Q9Y2J4 779 aa9.03□□□□□ -0.96
DDX1-204ENST00000459706 ERICH3Q5RHP9 1530 aa9.02□□□□□ -0.97
DDX1-204ENST00000459706 PBRM1Q86U86 1689 aa9.02□□□□□ -0.97
DDX1-204ENST00000459706 BACH1O14867 736 aa9.02□□□□□ -0.97
DDX1-204ENST00000459706 PLA2G2CQ5R387 149 aa9.02□□□□□ -0.97
DDX1-204ENST00000459706 TAS1R3Q7RTX0 852 aa9.02□□□□□ -0.97
DDX1-204ENST00000459706 KIAA1024Q9UPX6 916 aa9.02□□□□□ -0.97
DDX1-204ENST00000459706 ERVH48-1M5A8F1 160 aa9.01□□□□□ -0.97
DDX1-204ENST00000459706 GAS2L2Q8NHY3 880 aa9.01□□□□□ -0.97
DDX1-204ENST00000459706 CXXC1Q9P0U4 656 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms