RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 ANKRD44Q8N8A2 993 aa25.74■■□□□ 1.71
CRAT-207ENST00000458362 CDC45O75419 566 aa25.73■■□□□ 1.71
CRAT-207ENST00000458362 MSH6P52701 1360 aa25.73■■□□□ 1.71
CRAT-207ENST00000458362 C16orf71Q8IYS4 520 aaPredicted RBP25.72■■□□□ 1.71
CRAT-207ENST00000458362 MAP3K19Q56UN5 1328 aa25.72■■□□□ 1.71
CRAT-207ENST00000458362 FOXO3O43524 673 aa25.72■■□□□ 1.71
CRAT-207ENST00000458362 HSP90AB1P08238 724 aaKnown RBP25.71■■□□□ 1.71
CRAT-207ENST00000458362 RBM42Q9BTD8 480 aaKnown RBP25.71■■□□□ 1.71
CRAT-207ENST00000458362 MIS18AQ9NYP9 233 aa25.71■■□□□ 1.71
CRAT-207ENST00000458362 CEBPAP49715 358 aaPredicted RBP25.71■■□□□ 1.71
CRAT-207ENST00000458362 CEP85Q6P2H3 762 aa25.7■■□□□ 1.7
CRAT-207ENST00000458362 GZF1Q9H116 711 aaPredicted RBP25.7■■□□□ 1.7
CRAT-207ENST00000458362 ARHGEF10O15013 1369 aa25.7■■□□□ 1.7
CRAT-207ENST00000458362 TRAK2O60296 914 aa25.7■■□□□ 1.7
CRAT-207ENST00000458362 HAP1P54257 671 aaPredicted RBP25.7■■□□□ 1.7
CRAT-207ENST00000458362 RTL1A6NKG5 1358 aa25.69■■□□□ 1.7
CRAT-207ENST00000458362 RGPD8O14715 1765 aaPredicted RBP25.69■■□□□ 1.7
CRAT-207ENST00000458362 OTUD7AQ8TE49 926 aaPredicted RBP25.69■■□□□ 1.7
CRAT-207ENST00000458362 TTC22Q5TAA0 569 aa25.68■■□□□ 1.7
CRAT-207ENST00000458362 MEIS3Q99687 375 aa25.68■■□□□ 1.7
CRAT-207ENST00000458362 PTPRCP08575 1304 aa25.68■■□□□ 1.7
CRAT-207ENST00000458362 MTHFSDQ2M296 383 aaKnown RBP25.68■■□□□ 1.7
CRAT-207ENST00000458362 L1TD1Q5T7N2 865 aaKnown RBP25.68■■□□□ 1.7
CRAT-207ENST00000458362 RPAP2Q8IXW5 612 aaPredicted RBP25.67■■□□□ 1.7
CRAT-207ENST00000458362 AMOTL2Q9Y2J4 779 aa25.67■■□□□ 1.7
CRAT-207ENST00000458362 SLC4A2P04920 1241 aa25.66■■□□□ 1.7
CRAT-207ENST00000458362 FSD2A1L4K1 749 aa25.66■■□□□ 1.7
CRAT-207ENST00000458362 TTC21AQ8NDW8 1320 aa25.65■■□□□ 1.7
CRAT-207ENST00000458362 SMARCA5O60264 1052 aaPredicted RBP25.65■■□□□ 1.7
CRAT-207ENST00000458362 TNPO1Q92973 898 aaKnown RBP25.65■■□□□ 1.7
CRAT-207ENST00000458362 FOXD4L1Q9NU39 408 aa25.65■■□□□ 1.7
CRAT-207ENST00000458362 G2E3Q7L622 706 aa25.65■■□□□ 1.7
CRAT-207ENST00000458362 ARXQ96QS3 562 aa25.65■■□□□ 1.7
CRAT-207ENST00000458362 CIZ1Q9ULV3 898 aaPredicted RBP25.65■■□□□ 1.7
CRAT-207ENST00000458362 CEP170BQ9Y4F5 1589 aaPredicted RBP25.64■■□□□ 1.7
CRAT-207ENST00000458362 SBNO1A3KN83 1393 aa25.64■■□□□ 1.7
CRAT-207ENST00000458362 K7ELQ4 463 aaPredicted RBP25.64■■□□□ 1.7
CRAT-207ENST00000458362 DIP2AQ14689 1571 aa25.63■■□□□ 1.69
CRAT-207ENST00000458362 FLT4P35916 1363 aa25.63■■□□□ 1.69
CRAT-207ENST00000458362 SLIT1O75093 1534 aa25.63■■□□□ 1.69
CRAT-207ENST00000458362 DDX11L8A8MPP1 907 aa25.63■■□□□ 1.69
CRAT-207ENST00000458362 ARHGAP23Q9P227 1491 aa25.63■■□□□ 1.69
CRAT-207ENST00000458362 APBB1O00213 710 aa25.62■■□□□ 1.69
CRAT-207ENST00000458362 TSPYL4Q9UJ04 414 aa25.62■■□□□ 1.69
CRAT-207ENST00000458362 EID1Q9Y6B2 187 aa25.62■■□□□ 1.69
CRAT-207ENST00000458362 PIK3C2AO00443 1686 aa25.62■■□□□ 1.69
CRAT-207ENST00000458362 GOLGA6L3A6NEY3 463 aa25.62■■□□□ 1.69
CRAT-207ENST00000458362 RAB3GAP1Q15042 981 aa25.62■■□□□ 1.69
CRAT-207ENST00000458362 KDRP35968 1356 aa25.62■■□□□ 1.69
CRAT-207ENST00000458362 XRCC6P12956 609 aaKnown RBP eCLIP25.61■■□□□ 1.69
CRAT-207ENST00000458362 EYA1Q99502 592 aa25.61■■□□□ 1.69
CRAT-207ENST00000458362 GAS2L2Q8NHY3 880 aa25.61■■□□□ 1.69
CRAT-207ENST00000458362 TBX22Q9Y458 520 aa25.61■■□□□ 1.69
CRAT-207ENST00000458362 F6X3S4 739 aa25.6■■□□□ 1.69
CRAT-207ENST00000458362 NGDNQ8NEJ9 315 aaKnown RBP25.6■■□□□ 1.69
CRAT-207ENST00000458362 RTF1Q92541 710 aaKnown RBP25.6■■□□□ 1.69
CRAT-207ENST00000458362 IGSF1Q8N6C5 1336 aa25.59■■□□□ 1.69
CRAT-207ENST00000458362 SDSP20132 328 aa25.58■■□□□ 1.69
CRAT-207ENST00000458362 HSP90AA1P07900 732 aaKnown RBP25.58■■□□□ 1.69
CRAT-207ENST00000458362 AMPHP49418 695 aa25.58■■□□□ 1.69
CRAT-207ENST00000458362 FAM43AQ8N2R8 423 aa25.58■■□□□ 1.69
CRAT-207ENST00000458362 PLPPR3Q6T4P5 718 aa25.57■■□□□ 1.68
CRAT-207ENST00000458362 SLC4A10Q6U841 1118 aa25.57■■□□□ 1.68
CRAT-207ENST00000458362 USP26Q9BXU7 913 aa25.57■■□□□ 1.68
CRAT-207ENST00000458362 LRRC37A3O60309 1634 aa25.55■■□□□ 1.68
CRAT-207ENST00000458362 PANK2Q9BZ23 570 aa25.55■■□□□ 1.68
CRAT-207ENST00000458362 MARF1Q9Y4F3 1742 aaKnown RBP25.55■■□□□ 1.68
CRAT-207ENST00000458362 GBP4Q96PP9 640 aa25.53■■□□□ 1.68
CRAT-207ENST00000458362 CCT4P50991 539 aaKnown RBP25.53■■□□□ 1.68
CRAT-207ENST00000458362 RABEP1Q15276 862 aa25.53■■□□□ 1.68
CRAT-207ENST00000458362 ANO8Q9HCE9 1232 aaPredicted RBP25.53■■□□□ 1.68
CRAT-207ENST00000458362 SSFA2P28290 1259 aa25.52■■□□□ 1.68
CRAT-207ENST00000458362 FAM208AQ9UK61 1670 aaKnown RBP25.52■■□□□ 1.68
CRAT-207ENST00000458362 XRN1Q8IZH2 1706 aaKnown RBP25.51■■□□□ 1.67
CRAT-207ENST00000458362 NLRP6P59044 892 aa25.51■■□□□ 1.67
CRAT-207ENST00000458362 NUTM2GQ5VZR2 741 aa25.51■■□□□ 1.67
CRAT-207ENST00000458362 NWD1Q149M9 1564 aa25.51■■□□□ 1.67
CRAT-207ENST00000458362 EIF5BO60841 1220 aaKnown RBP25.51■■□□□ 1.67
CRAT-207ENST00000458362 HMMRO75330 724 aa25.5■■□□□ 1.67
CRAT-207ENST00000458362 AK9Q5TCS8 1911 aa25.5■■□□□ 1.67
CRAT-207ENST00000458362 HOXC9P31274 260 aa25.48■■□□□ 1.67
CRAT-207ENST00000458362 THEMISQ8N1K5 641 aaPredicted RBP25.48■■□□□ 1.67
CRAT-207ENST00000458362 STK31Q9BXU1 1019 aa25.48■■□□□ 1.67
CRAT-207ENST00000458362 HTATSF1O43719 755 aaKnown RBP25.47■■□□□ 1.67
CRAT-207ENST00000458362 NECTIN2Q92692 538 aa25.47■■□□□ 1.67
CRAT-207ENST00000458362 GNAT3A8MTJ3 354 aa25.47■■□□□ 1.67
CRAT-207ENST00000458362 GNAI2P04899 355 aa25.47■■□□□ 1.67
CRAT-207ENST00000458362 RRAGDQ9NQL2 400 aaPredicted RBP25.47■■□□□ 1.67
CRAT-207ENST00000458362 PDE1AP54750 535 aa25.46■■□□□ 1.67
CRAT-207ENST00000458362 FLIIQ13045 1269 aa25.46■■□□□ 1.67
CRAT-207ENST00000458362 CASC1Q6TDU7 716 aa25.46■■□□□ 1.67
CRAT-207ENST00000458362 EXOC6BQ9Y2D4 811 aa25.46■■□□□ 1.67
CRAT-207ENST00000458362 MRE11P49959 708 aa25.46■■□□□ 1.67
CRAT-207ENST00000458362 OSBPL3Q9H4L5 887 aa25.46■■□□□ 1.67
CRAT-207ENST00000458362 IL17REQ8NFR9 667 aa25.45■■□□□ 1.66
CRAT-207ENST00000458362 ANKARQ7Z5J8 1434 aa25.44■■□□□ 1.66
CRAT-207ENST00000458362 FER1L4A9Z1Z3 1794 aa25.44■■□□□ 1.66
CRAT-207ENST00000458362 KCNA6P17658 529 aa25.44■■□□□ 1.66
CRAT-207ENST00000458362 TUBGCP6Q96RT7 1819 aa25.44■■□□□ 1.66
CRAT-207ENST00000458362 GRPEL1Q9HAV7 217 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms