RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 RARSP54136 660 aaKnown RBP20.93■□□□□ 0.94
TMEM220-202ENST00000455996 HAP1P54257 671 aaPredicted RBP20.93■□□□□ 0.94
TMEM220-202ENST00000455996 EXOSC9Q06265 439 aaKnown RBP20.93■□□□□ 0.94
TMEM220-202ENST00000455996 PLEKHO1Q53GL0 409 aaPredicted RBP20.93■□□□□ 0.94
TMEM220-202ENST00000455996 PHLPP1O60346 1717 aa20.92■□□□□ 0.94
TMEM220-202ENST00000455996 COL5A2P05997 1499 aaPredicted RBP20.92■□□□□ 0.94
TMEM220-202ENST00000455996 CHL1O00533 1208 aa20.92■□□□□ 0.94
TMEM220-202ENST00000455996 MCM10Q7L590 875 aa20.92■□□□□ 0.94
TMEM220-202ENST00000455996 RTF1Q92541 710 aaKnown RBP20.92■□□□□ 0.94
TMEM220-202ENST00000455996 WDR17Q8IZU2 1322 aa20.91■□□□□ 0.94
TMEM220-202ENST00000455996 MBIPQ9NS73 344 aa20.91■□□□□ 0.94
TMEM220-202ENST00000455996 NLRP2Q9NX02 1062 aa20.91■□□□□ 0.94
TMEM220-202ENST00000455996 UBAP1LF5GYI3 381 aa20.9■□□□□ 0.94
TMEM220-202ENST00000455996 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.9■□□□□ 0.94
TMEM220-202ENST00000455996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.9■□□□□ 0.94
TMEM220-202ENST00000455996 CSB-PGBD3P0DP91 1061 aa20.89■□□□□ 0.94
TMEM220-202ENST00000455996 ZNF428Q96B54 188 aa20.89■□□□□ 0.94
TMEM220-202ENST00000455996 CEMIPQ8WUJ3 1361 aa20.89■□□□□ 0.93
TMEM220-202ENST00000455996 AKAP4Q5JQC9 854 aa20.88■□□□□ 0.93
TMEM220-202ENST00000455996 IL17REQ8NFR9 667 aa20.88■□□□□ 0.93
TMEM220-202ENST00000455996 CERKQ8TCT0 537 aa20.88■□□□□ 0.93
TMEM220-202ENST00000455996 BABAM1Q9NWV8 329 aa20.88■□□□□ 0.93
TMEM220-202ENST00000455996 OVOS2A0A0G2JMS6 1433 aa20.88■□□□□ 0.93
TMEM220-202ENST00000455996 BCAR3O75815 825 aa20.87■□□□□ 0.93
TMEM220-202ENST00000455996 LAS1LQ9Y4W2 734 aaKnown RBP20.87■□□□□ 0.93
TMEM220-202ENST00000455996 COL14A1Q05707 1796 aaKnown RBP20.87■□□□□ 0.93
TMEM220-202ENST00000455996 PIP4K2BP78356 416 aa20.87■□□□□ 0.93
TMEM220-202ENST00000455996 RAPGEF4Q8WZA2 1011 aa20.87■□□□□ 0.93
TMEM220-202ENST00000455996 PLIN1O60240 522 aa20.86■□□□□ 0.93
TMEM220-202ENST00000455996 TATP17735 454 aaPredicted RBP20.86■□□□□ 0.93
TMEM220-202ENST00000455996 ZNF530Q6P9A1 599 aaPredicted RBP20.86■□□□□ 0.93
TMEM220-202ENST00000455996 CARD10Q9BWT7 1032 aa20.86■□□□□ 0.93
TMEM220-202ENST00000455996 PPP4R2Q9NY27 417 aa20.86■□□□□ 0.93
TMEM220-202ENST00000455996 MEGF6O75095 1541 aa20.86■□□□□ 0.93
TMEM220-202ENST00000455996 ALDH1L2Q3SY69 923 aa20.85■□□□□ 0.93
TMEM220-202ENST00000455996 BRPF1P55201 1214 aaPredicted RBP20.84■□□□□ 0.93
TMEM220-202ENST00000455996 ADAMTS7Q9UKP4 1686 aa20.83■□□□□ 0.93
TMEM220-202ENST00000455996 VAMP4O75379 141 aa20.83■□□□□ 0.93
TMEM220-202ENST00000455996 SPG7Q9UQ90 795 aa20.82■□□□□ 0.92
TMEM220-202ENST00000455996 PKD1L3Q7Z443 1732 aa20.82■□□□□ 0.92
TMEM220-202ENST00000455996 PDE3AQ14432 1141 aa20.81■□□□□ 0.92
TMEM220-202ENST00000455996 C1orf141Q5JVX7 400 aa20.81■□□□□ 0.92
TMEM220-202ENST00000455996 TOM1L2Q6ZVM7 507 aa20.81■□□□□ 0.92
TMEM220-202ENST00000455996 SSH1Q8WYL5 1049 aa20.81■□□□□ 0.92
TMEM220-202ENST00000455996 TAF7Q15545 349 aaPredicted RBP20.8■□□□□ 0.92
TMEM220-202ENST00000455996 TSPYL6Q8N831 410 aa20.8■□□□□ 0.92
TMEM220-202ENST00000455996 C8orf58Q8NAV2 365 aa20.8■□□□□ 0.92
TMEM220-202ENST00000455996 RNMTO43148 476 aaKnown RBP20.79■□□□□ 0.92
TMEM220-202ENST00000455996 C20orf194Q5TEA3 1177 aa20.79■□□□□ 0.92
TMEM220-202ENST00000455996 LARP1Q6PKG0 1096 aaKnown RBP20.79■□□□□ 0.92
TMEM220-202ENST00000455996 EVA1CP58658 441 aa20.78■□□□□ 0.92
TMEM220-202ENST00000455996 TWISTNBQ3B726 338 aaPredicted RBP20.78■□□□□ 0.92
TMEM220-202ENST00000455996 EXOC6Q8TAG9 804 aa20.78■□□□□ 0.92
TMEM220-202ENST00000455996 LGR6Q9HBX8 967 aa20.78■□□□□ 0.92
TMEM220-202ENST00000455996 BTG4Q9NY30 223 aa20.78■□□□□ 0.92
TMEM220-202ENST00000455996 TSPYL4Q9UJ04 414 aa20.78■□□□□ 0.92
TMEM220-202ENST00000455996 PARP4Q9UKK3 1724 aaKnown RBP20.78■□□□□ 0.92
TMEM220-202ENST00000455996 PHKG2P15735 406 aa20.78■□□□□ 0.92
TMEM220-202ENST00000455996 SMC4Q9NTJ3 1288 aa20.78■□□□□ 0.92
TMEM220-202ENST00000455996 SOS1Q07889 1333 aaPredicted RBP20.78■□□□□ 0.92
TMEM220-202ENST00000455996 CRBNQ96SW2 442 aa20.77■□□□□ 0.91
TMEM220-202ENST00000455996 JCADQ9P266 1359 aa20.77■□□□□ 0.91
TMEM220-202ENST00000455996 MPRIPQ6WCQ1 1025 aa20.76■□□□□ 0.91
TMEM220-202ENST00000455996 IFNL2Q8IZJ0 200 aa20.76■□□□□ 0.91
TMEM220-202ENST00000455996 STRN4Q9NRL3 753 aa20.76■□□□□ 0.91
TMEM220-202ENST00000455996 KIF16BQ96L93 1317 aa20.75■□□□□ 0.91
TMEM220-202ENST00000455996 BCL2L13Q9BXK5 485 aa20.75■□□□□ 0.91
TMEM220-202ENST00000455996 MIS18AQ9NYP9 233 aa20.75■□□□□ 0.91
TMEM220-202ENST00000455996 CYP27B1O15528 508 aa20.74■□□□□ 0.91
TMEM220-202ENST00000455996 IL2RBP14784 551 aa20.74■□□□□ 0.91
TMEM220-202ENST00000455996 MRPL50Q8N5N7 158 aaKnown RBP20.74■□□□□ 0.91
TMEM220-202ENST00000455996 KDM6AO15550 1401 aaPredicted RBP20.73■□□□□ 0.91
TMEM220-202ENST00000455996 ZKSCAN2Q63HK3 967 aa20.73■□□□□ 0.91
TMEM220-202ENST00000455996 DISP2A7MBM2 1401 aa20.73■□□□□ 0.91
TMEM220-202ENST00000455996 PLCH1Q4KWH8 1693 aa20.72■□□□□ 0.91
TMEM220-202ENST00000455996 HSP90AB1P08238 724 aaKnown RBP20.72■□□□□ 0.91
TMEM220-202ENST00000455996 MS4A1P11836 297 aa20.72■□□□□ 0.91
TMEM220-202ENST00000455996 CANXP27824 592 aaKnown RBP20.72■□□□□ 0.91
TMEM220-202ENST00000455996 TEFQ10587 303 aa20.72■□□□□ 0.91
TMEM220-202ENST00000455996 ZCRB1Q8TBF4 217 aaKnown RBP20.72■□□□□ 0.91
TMEM220-202ENST00000455996 FRAT1Q92837 279 aaPredicted RBP20.72■□□□□ 0.91
TMEM220-202ENST00000455996 KDM3BQ7LBC6 1761 aa20.72■□□□□ 0.91
TMEM220-202ENST00000455996 MRC1P22897 1456 aa20.72■□□□□ 0.91
TMEM220-202ENST00000455996 SLIT2O94813 1529 aa20.71■□□□□ 0.91
TMEM220-202ENST00000455996 ELL2O00472 640 aaPredicted RBP20.71■□□□□ 0.91
TMEM220-202ENST00000455996 KRT24Q2M2I5 525 aa20.71■□□□□ 0.91
TMEM220-202ENST00000455996 ARHGAP45Q92619 1136 aa20.71■□□□□ 0.91
TMEM220-202ENST00000455996 DCAF5Q96JK2 942 aa20.71■□□□□ 0.91
TMEM220-202ENST00000455996 NRAPQ86VF7 1730 aa20.71■□□□□ 0.91
TMEM220-202ENST00000455996 SIPA1L3O60292 1781 aaPredicted RBP20.71■□□□□ 0.91
TMEM220-202ENST00000455996 PCDH11XQ9BZA7 1347 aa20.71■□□□□ 0.91
TMEM220-202ENST00000455996 PCDH11YQ9BZA8 1340 aa20.71■□□□□ 0.91
TMEM220-202ENST00000455996 IPO8O15397 1037 aaKnown RBP20.7■□□□□ 0.9
TMEM220-202ENST00000455996 ADAMTS2O95450 1211 aa20.7■□□□□ 0.9
TMEM220-202ENST00000455996 NKX1-1Q15270 411 aaPredicted RBP20.7■□□□□ 0.9
TMEM220-202ENST00000455996 ATF7IPQ6VMQ6 1270 aa20.7■□□□□ 0.9
TMEM220-202ENST00000455996 NOB1Q9ULX3 412 aaKnown RBP20.7■□□□□ 0.9
TMEM220-202ENST00000455996 SCN11AQ9UI33 1791 aa20.69■□□□□ 0.9
TMEM220-202ENST00000455996 NWD2Q9ULI1 1742 aa20.69■□□□□ 0.9
TMEM220-202ENST00000455996 SPATA31A6Q5VVP1 1343 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms