RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 AATKQ6ZMQ8 1374 aa19.34■□□□□ 0.69
TRA2B-205ENST00000453386 PPP1R9BQ96SB3 815 aa19.34■□□□□ 0.69
TRA2B-205ENST00000453386 CPSF1Q10570 1443 aaKnown RBP19.33■□□□□ 0.69
TRA2B-205ENST00000453386 LMBRD1Q9NUN5 540 aa19.33■□□□□ 0.69
TRA2B-205ENST00000453386 PRPF40AO75400 957 aaKnown RBP19.33■□□□□ 0.68
TRA2B-205ENST00000453386 CWC22Q9HCG8 908 aaKnown RBP19.33■□□□□ 0.68
TRA2B-205ENST00000453386 AK9Q5TCS8 1911 aa19.33■□□□□ 0.68
TRA2B-205ENST00000453386 REREQ9P2R6 1566 aa19.32■□□□□ 0.68
TRA2B-205ENST00000453386 REC8O95072 547 aa19.32■□□□□ 0.68
TRA2B-205ENST00000453386 ZSCAN23Q3MJ62 389 aa19.32■□□□□ 0.68
TRA2B-205ENST00000453386 CCDC61Q9Y6R9 512 aa19.32■□□□□ 0.68
TRA2B-205ENST00000453386 MSH6P52701 1360 aa19.31■□□□□ 0.68
TRA2B-205ENST00000453386 IBTKQ9P2D0 1353 aaPredicted RBP19.31■□□□□ 0.68
TRA2B-205ENST00000453386 SLC4A2P04920 1241 aa19.31■□□□□ 0.68
TRA2B-205ENST00000453386 CYP2E1P05181 493 aaPredicted RBP19.31■□□□□ 0.68
TRA2B-205ENST00000453386 SLC4A10Q6U841 1118 aa19.31■□□□□ 0.68
TRA2B-205ENST00000453386 ATP10DQ9P241 1426 aa19.31■□□□□ 0.68
TRA2B-205ENST00000453386 ZSCAN30Q86W11 494 aa19.31■□□□□ 0.68
TRA2B-205ENST00000453386 RTL1A6NKG5 1358 aa19.31■□□□□ 0.68
TRA2B-205ENST00000453386 KNDC1Q76NI1 1749 aa19.3■□□□□ 0.68
TRA2B-205ENST00000453386 CHL1O00533 1208 aa19.3■□□□□ 0.68
TRA2B-205ENST00000453386 ZNF445P59923 1031 aa19.3■□□□□ 0.68
TRA2B-205ENST00000453386 EIF4A2Q14240 407 aaKnown RBP19.3■□□□□ 0.68
TRA2B-205ENST00000453386 MSNP26038 577 aaKnown RBP19.3■□□□□ 0.68
TRA2B-205ENST00000453386 FOXD4L5Q5VV16 416 aaPredicted RBP19.3■□□□□ 0.68
TRA2B-205ENST00000453386 FOXD4L4Q8WXT5 416 aaPredicted RBP19.3■□□□□ 0.68
TRA2B-205ENST00000453386 GLIPR1L2Q4G1C9 344 aa19.29■□□□□ 0.68
TRA2B-205ENST00000453386 MIS18AQ9NYP9 233 aa19.29■□□□□ 0.68
TRA2B-205ENST00000453386 ERC2O15083 957 aa19.29■□□□□ 0.68
TRA2B-205ENST00000453386 RRP9O43818 475 aaKnown RBP19.29■□□□□ 0.68
TRA2B-205ENST00000453386 HMMRO75330 724 aa19.28■□□□□ 0.68
TRA2B-205ENST00000453386 MLECQ14165 292 aa19.28■□□□□ 0.68
TRA2B-205ENST00000453386 CHAMP1Q96JM3 812 aa19.28■□□□□ 0.68
TRA2B-205ENST00000453386 RBM27Q9P2N5 1060 aaKnown RBP19.28■□□□□ 0.68
TRA2B-205ENST00000453386 PTPRCP08575 1304 aa19.28■□□□□ 0.68
TRA2B-205ENST00000453386 SOX12O15370 315 aa19.28■□□□□ 0.68
TRA2B-205ENST00000453386 RBSNQ9H1K0 784 aa19.27■□□□□ 0.68
TRA2B-205ENST00000453386 RGS12O14924 1447 aa19.27■□□□□ 0.68
TRA2B-205ENST00000453386 CPS1P31327 1500 aa19.27■□□□□ 0.68
TRA2B-205ENST00000453386 PRIM1P49642 420 aaKnown RBP19.27■□□□□ 0.68
TRA2B-205ENST00000453386 DLG5Q8TDM6 1919 aa19.27■□□□□ 0.68
TRA2B-205ENST00000453386 DLC1Q96QB1 1528 aa19.27■□□□□ 0.67
TRA2B-205ENST00000453386 F6X3S4 739 aa19.26■□□□□ 0.67
TRA2B-205ENST00000453386 ZDHHC9Q9Y397 364 aa19.26■□□□□ 0.67
TRA2B-205ENST00000453386 NEK4P51957 841 aa19.26■□□□□ 0.67
TRA2B-205ENST00000453386 KIAA1211Q6ZU35 1233 aa19.26■□□□□ 0.67
TRA2B-205ENST00000453386 GPT2Q8TD30 523 aa19.26■□□□□ 0.67
TRA2B-205ENST00000453386 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.26■□□□□ 0.67
TRA2B-205ENST00000453386 METP08581 1390 aa19.25■□□□□ 0.67
TRA2B-205ENST00000453386 RICTORQ6R327 1708 aa19.25■□□□□ 0.67
TRA2B-205ENST00000453386 TSHZ3Q63HK5 1081 aa19.25■□□□□ 0.67
TRA2B-205ENST00000453386 PDE1AP54750 535 aa19.25■□□□□ 0.67
TRA2B-205ENST00000453386 A2ML1A8K2U0 1454 aa19.25■□□□□ 0.67
TRA2B-205ENST00000453386 NUTM2FA1L443 756 aa19.24■□□□□ 0.67
TRA2B-205ENST00000453386 HSP90AB2PQ58FF8 381 aa19.24■□□□□ 0.67
TRA2B-205ENST00000453386 TPM2P07951 284 aa19.23■□□□□ 0.67
TRA2B-205ENST00000453386 G2E3Q7L622 706 aa19.23■□□□□ 0.67
TRA2B-205ENST00000453386 EXOC6BQ9Y2D4 811 aa19.23■□□□□ 0.67
TRA2B-205ENST00000453386 KIAA0232Q92628 1395 aa19.23■□□□□ 0.67
TRA2B-205ENST00000453386 NOL8Q76FK4 1167 aaKnown RBP19.23■□□□□ 0.67
TRA2B-205ENST00000453386 TMX3Q96JJ7 454 aa19.22■□□□□ 0.67
TRA2B-205ENST00000453386 TSPYL4Q9UJ04 414 aa19.21■□□□□ 0.67
TRA2B-205ENST00000453386 SYCE3A1L190 88 aa19.21■□□□□ 0.67
TRA2B-205ENST00000453386 RTF1Q92541 710 aaKnown RBP19.21■□□□□ 0.67
TRA2B-205ENST00000453386 PRR36Q9H6K5 1346 aa19.21■□□□□ 0.67
TRA2B-205ENST00000453386 FOXO3O43524 673 aa19.2■□□□□ 0.66
TRA2B-205ENST00000453386 TMEM63CQ9P1W3 806 aa19.2■□□□□ 0.66
TRA2B-205ENST00000453386 OFD1O75665 1012 aa19.2■□□□□ 0.66
TRA2B-205ENST00000453386 NSFL1CQ9UNZ2 370 aaKnown RBP19.2■□□□□ 0.66
TRA2B-205ENST00000453386 CCT4P50991 539 aaKnown RBP19.2■□□□□ 0.66
TRA2B-205ENST00000453386 OSBPL3Q9H4L5 887 aa19.2■□□□□ 0.66
TRA2B-205ENST00000453386 GNAI2P04899 355 aa19.19■□□□□ 0.66
TRA2B-205ENST00000453386 RILPL2Q969X0 211 aa19.19■□□□□ 0.66
TRA2B-205ENST00000453386 TTC21BQ7Z4L5 1316 aa19.19■□□□□ 0.66
TRA2B-205ENST00000453386 TRIM6-TRIM34B2RNG4 842 aa19.19■□□□□ 0.66
TRA2B-205ENST00000453386 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.18■□□□□ 0.66
TRA2B-205ENST00000453386 ANO2Q9NQ90 1003 aa19.18■□□□□ 0.66
TRA2B-205ENST00000453386 VSIG10Q8N0Z9 540 aa19.18■□□□□ 0.66
TRA2B-205ENST00000453386 MCCP23508 829 aa19.17■□□□□ 0.66
TRA2B-205ENST00000453386 LRSAM1Q6UWE0 723 aa19.17■□□□□ 0.66
TRA2B-205ENST00000453386 ESYT1Q9BSJ8 1104 aa19.17■□□□□ 0.66
TRA2B-205ENST00000453386 HS1BP3Q53T59 392 aa19.17■□□□□ 0.66
TRA2B-205ENST00000453386 FOXD4L6Q3SYB3 417 aaPredicted RBP19.17■□□□□ 0.66
TRA2B-205ENST00000453386 FOXD4L3Q6VB84 417 aaPredicted RBP19.17■□□□□ 0.66
TRA2B-205ENST00000453386 RNF214Q8ND24 703 aa19.17■□□□□ 0.66
TRA2B-205ENST00000453386 STK31Q9BXU1 1019 aa19.17■□□□□ 0.66
TRA2B-205ENST00000453386 LRRCC1Q9C099 1032 aa19.17■□□□□ 0.66
TRA2B-205ENST00000453386 NOL7Q9UMY1 257 aaKnown RBP19.17■□□□□ 0.66
TRA2B-205ENST00000453386 MTHFSDQ2M296 383 aaKnown RBP19.16■□□□□ 0.66
TRA2B-205ENST00000453386 PDLIM2Q96JY6 352 aa19.16■□□□□ 0.66
TRA2B-205ENST00000453386 PALD1Q9ULE6 856 aa19.16■□□□□ 0.66
TRA2B-205ENST00000453386 RIMBP3CA6NJZ7 1639 aa19.16■□□□□ 0.66
TRA2B-205ENST00000453386 RIMBP3BA6NNM3 1639 aa19.16■□□□□ 0.66
TRA2B-205ENST00000453386 RIMBP3Q9UFD9 1639 aa19.16■□□□□ 0.66
TRA2B-205ENST00000453386 ACEP12821 1306 aa19.16■□□□□ 0.66
TRA2B-205ENST00000453386 MX1P20591 662 aa19.16■□□□□ 0.66
TRA2B-205ENST00000453386 NECTIN2Q92692 538 aa19.16■□□□□ 0.66
TRA2B-205ENST00000453386 MCM2P49736 904 aa19.15■□□□□ 0.66
TRA2B-205ENST00000453386 R3HCC1Q9Y3T6 440 aaKnown RBP19.15■□□□□ 0.66
TRA2B-205ENST00000453386 PPP6R1Q9UPN7 881 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms