RNA–Protein interactions for RNA: ENST00000450482.5

SS18L1-203, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-203ENST00000450482 NBPF4Q96M43 638 aa16.3■□□□□ 0.2
SS18L1-203ENST00000450482 CGNL1Q0VF96 1302 aa16.29■□□□□ 0.2
SS18L1-203ENST00000450482 CDCA8Q53HL2 280 aa16.29■□□□□ 0.2
SS18L1-203ENST00000450482 ARXQ96QS3 562 aa16.29■□□□□ 0.2
SS18L1-203ENST00000450482 BTAF1O14981 1849 aa16.29■□□□□ 0.2
SS18L1-203ENST00000450482 KIF24Q5T7B8 1368 aa16.28■□□□□ 0.2
SS18L1-203ENST00000450482 SYTL4Q96C24 671 aaPredicted RBP16.28■□□□□ 0.2
SS18L1-203ENST00000450482 INSRP06213 1382 aa16.27■□□□□ 0.2
SS18L1-203ENST00000450482 SLC16A10Q8TF71 515 aa16.27■□□□□ 0.2
SS18L1-203ENST00000450482 SMG6Q86US8 1419 aaKnown RBP16.27■□□□□ 0.19
SS18L1-203ENST00000450482 FLT4P35916 1363 aa16.26■□□□□ 0.19
SS18L1-203ENST00000450482 UTRNP46939 3433 aa16.26■□□□□ 0.19
SS18L1-203ENST00000450482 PNPLA7Q6ZV29 1317 aa16.26■□□□□ 0.19
SS18L1-203ENST00000450482 HSP90AB2PQ58FF8 381 aa16.26■□□□□ 0.19
SS18L1-203ENST00000450482 USHBP1Q8N6Y0 703 aa16.26■□□□□ 0.19
SS18L1-203ENST00000450482 CARD14Q9BXL6 1004 aa16.26■□□□□ 0.19
SS18L1-203ENST00000450482 KCNQ4P56696 695 aa16.25■□□□□ 0.19
SS18L1-203ENST00000450482 RAPGEF4Q8WZA2 1011 aa16.25■□□□□ 0.19
SS18L1-203ENST00000450482 TFCP2L1Q9NZI6 479 aa16.24■□□□□ 0.19
SS18L1-203ENST00000450482 TIMELESSQ9UNS1 1208 aa16.24■□□□□ 0.19
SS18L1-203ENST00000450482 PCDH11XQ9BZA7 1347 aa16.22■□□□□ 0.19
SS18L1-203ENST00000450482 PCDH11YQ9BZA8 1340 aa16.22■□□□□ 0.19
SS18L1-203ENST00000450482 NSD3Q9BZ95 1437 aa16.22■□□□□ 0.19
SS18L1-203ENST00000450482 TATP17735 454 aaPredicted RBP16.22■□□□□ 0.19
SS18L1-203ENST00000450482 CCNL1Q9UK58 526 aaPredicted RBP16.22■□□□□ 0.19
SS18L1-203ENST00000450482 SHANK3Q9BYB0 1731 aa16.22■□□□□ 0.19
SS18L1-203ENST00000450482 NCAPD2Q15021 1401 aa16.21■□□□□ 0.19
SS18L1-203ENST00000450482 EMILIN1Q9Y6C2 1016 aa16.21■□□□□ 0.19
SS18L1-203ENST00000450482 DOT1LQ8TEK3 1739 aa16.2■□□□□ 0.18
SS18L1-203ENST00000450482 POLD1P28340 1107 aa16.2■□□□□ 0.18
SS18L1-203ENST00000450482 CLSPNQ9HAW4 1339 aa16.19■□□□□ 0.18
SS18L1-203ENST00000450482 CYP27B1O15528 508 aa16.19■□□□□ 0.18
SS18L1-203ENST00000450482 ZNF784Q8NCA9 323 aaPredicted RBP16.19■□□□□ 0.18
SS18L1-203ENST00000450482 LY75O60449 1722 aa16.17■□□□□ 0.18
SS18L1-203ENST00000450482 WASHC2AQ641Q2 1341 aa16.17■□□□□ 0.18
SS18L1-203ENST00000450482 QSER1Q2KHR3 1735 aa16.16■□□□□ 0.18
SS18L1-203ENST00000450482 PALLDQ8WX93 1383 aa16.16■□□□□ 0.18
SS18L1-203ENST00000450482 COL23A1Q86Y22 540 aaPredicted RBP16.16■□□□□ 0.18
SS18L1-203ENST00000450482 RGPD2P0DJD1 1756 aa16.15■□□□□ 0.18
SS18L1-203ENST00000450482 HMGB2P26583 209 aaKnown RBP16.15■□□□□ 0.18
SS18L1-203ENST00000450482 NKX1-1Q15270 411 aaPredicted RBP16.15■□□□□ 0.18
SS18L1-203ENST00000450482 COL24A1Q17RW2 1714 aa16.15■□□□□ 0.18
SS18L1-203ENST00000450482 MPRIPQ6WCQ1 1025 aa16.14■□□□□ 0.17
SS18L1-203ENST00000450482 KIF20BQ96Q89 1820 aa16.13■□□□□ 0.17
SS18L1-203ENST00000450482 PPM1GO15355 546 aaPredicted RBP16.13■□□□□ 0.17
SS18L1-203ENST00000450482 GPR162Q16538 588 aa16.13■□□□□ 0.17
SS18L1-203ENST00000450482 KLHL34Q8N239 644 aa16.13■□□□□ 0.17
SS18L1-203ENST00000450482 NLGN2Q8NFZ4 835 aa16.13■□□□□ 0.17
SS18L1-203ENST00000450482 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.13■□□□□ 0.17
SS18L1-203ENST00000450482 POLKQ9UBT6 870 aa16.13■□□□□ 0.17
SS18L1-203ENST00000450482 PIGBQ92521 554 aa16.12■□□□□ 0.17
SS18L1-203ENST00000450482 SMARCC1Q92922 1105 aaPredicted RBP16.12■□□□□ 0.17
SS18L1-203ENST00000450482 EYA1Q99502 592 aa16.12■□□□□ 0.17
SS18L1-203ENST00000450482 SPG7Q9UQ90 795 aa16.12■□□□□ 0.17
SS18L1-203ENST00000450482 MSH5O43196 834 aa16.11■□□□□ 0.17
SS18L1-203ENST00000450482 FLAD1Q8NFF5 587 aa16.11■□□□□ 0.17
SS18L1-203ENST00000450482 PLEKHG2Q9H7P9 1386 aa16.11■□□□□ 0.17
SS18L1-203ENST00000450482 ANKRD26Q9UPS8 1709 aa16.11■□□□□ 0.17
SS18L1-203ENST00000450482 TUBGCP6Q96RT7 1819 aa16.1■□□□□ 0.17
SS18L1-203ENST00000450482 PKD1L3Q7Z443 1732 aa16.09■□□□□ 0.17
SS18L1-203ENST00000450482 MSL1Q68DK7 614 aa16.09■□□□□ 0.17
SS18L1-203ENST00000450482 AMIGO3Q86WK7 504 aa16.09■□□□□ 0.17
SS18L1-203ENST00000450482 TOGARAM1Q9Y4F4 1720 aa16.08■□□□□ 0.17
SS18L1-203ENST00000450482 GOLGB1Q14789 3259 aaKnown RBP16.08■□□□□ 0.17
SS18L1-203ENST00000450482 EIF4A2Q14240 407 aaKnown RBP16.08■□□□□ 0.16
SS18L1-203ENST00000450482 LOC102724428A0A0B4J2F2 783 aa16.07■□□□□ 0.16
SS18L1-203ENST00000450482 PHKG2P15735 406 aa16.07■□□□□ 0.16
SS18L1-203ENST00000450482 YBX3P16989 372 aaKnown RBP eCLIP16.07■□□□□ 0.16
SS18L1-203ENST00000450482 SIK1P57059 783 aa16.07■□□□□ 0.16
SS18L1-203ENST00000450482 AK7Q96M32 723 aa16.07■□□□□ 0.16
SS18L1-203ENST00000450482 PCGF6Q9BYE7 350 aa16.07■□□□□ 0.16
SS18L1-203ENST00000450482 CD2APQ9Y5K6 639 aa16.07■□□□□ 0.16
SS18L1-203ENST00000450482 C5P01031 1676 aa16.06■□□□□ 0.16
SS18L1-203ENST00000450482 IFNL2Q8IZJ0 200 aa16.06■□□□□ 0.16
SS18L1-203ENST00000450482 PELP1Q8IZL8 1130 aaKnown RBP16.06■□□□□ 0.16
SS18L1-203ENST00000450482 TMOD3Q9NYL9 352 aa16.06■□□□□ 0.16
SS18L1-203ENST00000450482 IGSF1Q8N6C5 1336 aa16.05■□□□□ 0.16
SS18L1-203ENST00000450482 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.05■□□□□ 0.16
SS18L1-203ENST00000450482 GRIN3BO60391 1043 aa16.05■□□□□ 0.16
SS18L1-203ENST00000450482 EIF4G2P78344 907 aaKnown RBP eCLIP16.05■□□□□ 0.166e-6■■■■□ 25.1
SS18L1-203ENST00000450482 LINC00116Q8NCU8 138 aa16.05■□□□□ 0.16
SS18L1-203ENST00000450482 POLR3GLQ9BT43 218 aa16.05■□□□□ 0.16
SS18L1-203ENST00000450482 KAT6BQ8WYB5 2073 aa16.05■□□□□ 0.16
SS18L1-203ENST00000450482 HSPA5P11021 654 aaKnown RBP16.04■□□□□ 0.16
SS18L1-203ENST00000450482 SSFA2P28290 1259 aa16.04■□□□□ 0.16
SS18L1-203ENST00000450482 TNNT2P45379 298 aaPredicted RBP16.04■□□□□ 0.16
SS18L1-203ENST00000450482 ASAP1Q9ULH1 1129 aa16.04■□□□□ 0.16
SS18L1-203ENST00000450482 C4BP0C0L5 1744 aa16.04■□□□□ 0.16
SS18L1-203ENST00000450482 C1QTNF8P60827 252 aa16.03■□□□□ 0.16
SS18L1-203ENST00000450482 ITPK1Q13572 414 aa16.03■□□□□ 0.16
SS18L1-203ENST00000450482 PANK3Q9H999 370 aa16.03■□□□□ 0.16
SS18L1-203ENST00000450482 PHF14O94880 888 aa16.02■□□□□ 0.16
SS18L1-203ENST00000450482 SMIM5Q71RC9 77 aa16.02■□□□□ 0.16
SS18L1-203ENST00000450482 ATG3Q9NT62 314 aa16.02■□□□□ 0.16
SS18L1-203ENST00000450482 KDRP35968 1356 aa16.01■□□□□ 0.15
SS18L1-203ENST00000450482 ERVV-2B6SEH9 535 aa16■□□□□ 0.15
SS18L1-203ENST00000450482 ATP6V1AP38606 617 aa16■□□□□ 0.15
SS18L1-203ENST00000450482 GNPATO15228 680 aa15.99■□□□□ 0.15
SS18L1-203ENST00000450482 DCAF5Q96JK2 942 aa15.99■□□□□ 0.15
SS18L1-203ENST00000450482 MAP2P11137 1827 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms