RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 NMRK2Q9NPI5 230 aa18.33■□□□□ 0.52
AC004540.1-204ENST00000449537 WDR90Q96KV7 1748 aa18.32■□□□□ 0.52
AC004540.1-204ENST00000449537 C16orf71Q8IYS4 520 aaPredicted RBP18.32■□□□□ 0.52
AC004540.1-204ENST00000449537 TTC21AQ8NDW8 1320 aa18.31■□□□□ 0.52
AC004540.1-204ENST00000449537 CENPJQ9HC77 1338 aaPredicted RBP18.31■□□□□ 0.52
AC004540.1-204ENST00000449537 HMGB2P26583 209 aaKnown RBP18.31■□□□□ 0.52
AC004540.1-204ENST00000449537 ANKRD36BQ8N2N9 1353 aa18.3■□□□□ 0.52
AC004540.1-204ENST00000449537 FSTL1Q12841 308 aa18.3■□□□□ 0.52
AC004540.1-204ENST00000449537 ANKRD24Q8TF21 1146 aa18.3■□□□□ 0.52
AC004540.1-204ENST00000449537 LY75O60449 1722 aa18.29■□□□□ 0.52
AC004540.1-204ENST00000449537 NFAT5O94916 1531 aa18.28■□□□□ 0.52
AC004540.1-204ENST00000449537 NBPF1Q3BBV0 1214 aa18.28■□□□□ 0.52
AC004540.1-204ENST00000449537 USP47Q96K76 1375 aa18.27■□□□□ 0.51
AC004540.1-204ENST00000449537 QRICH2Q9H0J4 1663 aa18.26■□□□□ 0.51
AC004540.1-204ENST00000449537 NSD2O96028 1365 aa18.25■□□□□ 0.51
AC004540.1-204ENST00000449537 ARHGAP27Q6ZUM4 889 aa18.24■□□□□ 0.51
AC004540.1-204ENST00000449537 EVC2Q86UK5 1308 aa18.23■□□□□ 0.51
AC004540.1-204ENST00000449537 HSPA1AP0DMV8 641 aaKnown RBP18.23■□□□□ 0.51
AC004540.1-204ENST00000449537 HSPA1BP0DMV9 641 aaKnown RBP18.23■□□□□ 0.51
AC004540.1-204ENST00000449537 PCDH10Q9P2E7 1040 aa18.23■□□□□ 0.51
AC004540.1-204ENST00000449537 ZCRB1Q8TBF4 217 aaKnown RBP18.22■□□□□ 0.51
AC004540.1-204ENST00000449537 BCS1LQ9Y276 419 aa18.21■□□□□ 0.51
AC004540.1-204ENST00000449537 KTN1Q86UP2 1357 aaKnown RBP18.2■□□□□ 0.5
AC004540.1-204ENST00000449537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.2■□□□□ 0.5
AC004540.1-204ENST00000449537 CICQ96RK0 1608 aaPredicted RBP18.2■□□□□ 0.5
AC004540.1-204ENST00000449537 PCNTO95613 3336 aa18.19■□□□□ 0.5
AC004540.1-204ENST00000449537 LTV1Q96GA3 475 aaPredicted RBP18.19■□□□□ 0.5
AC004540.1-204ENST00000449537 AK7Q96M32 723 aa18.19■□□□□ 0.5
AC004540.1-204ENST00000449537 KDM2BQ8NHM5 1336 aa18.18■□□□□ 0.5
AC004540.1-204ENST00000449537 DOT1LQ8TEK3 1739 aa18.18■□□□□ 0.5
AC004540.1-204ENST00000449537 KIAA1210Q9ULL0 1709 aa18.18■□□□□ 0.5
AC004540.1-204ENST00000449537 USP31Q70CQ4 1352 aa18.17■□□□□ 0.5
AC004540.1-204ENST00000449537 PHF14O94880 888 aa18.17■□□□□ 0.5
AC004540.1-204ENST00000449537 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.16■□□□□ 0.5
AC004540.1-204ENST00000449537 TGFB2P61812 414 aa18.16■□□□□ 0.5
AC004540.1-204ENST00000449537 C9orf131Q5VYM1 1079 aa18.16■□□□□ 0.5
AC004540.1-204ENST00000449537 SMC1BQ8NDV3 1235 aa18.16■□□□□ 0.5
AC004540.1-204ENST00000449537 IP6K1Q92551 441 aa18.16■□□□□ 0.5
AC004540.1-204ENST00000449537 RRAGCQ9HB90 399 aa18.16■□□□□ 0.5
AC004540.1-204ENST00000449537 A0A0G2JLW4 131 aa18.15■□□□□ 0.5
AC004540.1-204ENST00000449537 AMIGO3Q86WK7 504 aa18.15■□□□□ 0.5
AC004540.1-204ENST00000449537 NME9Q86XW9 330 aa18.15■□□□□ 0.5
AC004540.1-204ENST00000449537 C5P01031 1676 aa18.15■□□□□ 0.5
AC004540.1-204ENST00000449537 SMIM5Q71RC9 77 aa18.14■□□□□ 0.49
AC004540.1-204ENST00000449537 LTN1O94822 1766 aa18.14■□□□□ 0.49
AC004540.1-204ENST00000449537 FCHSD2O94868 740 aa18.13■□□□□ 0.49
AC004540.1-204ENST00000449537 PALLDQ8WX93 1383 aa18.12■□□□□ 0.49
AC004540.1-204ENST00000449537 PLEKHG2Q9H7P9 1386 aa18.12■□□□□ 0.49
AC004540.1-204ENST00000449537 MMP10P09238 476 aa18.11■□□□□ 0.49
AC004540.1-204ENST00000449537 SSFA2P28290 1259 aa18.11■□□□□ 0.49
AC004540.1-204ENST00000449537 NSD3Q9BZ95 1437 aa18.11■□□□□ 0.49
AC004540.1-204ENST00000449537 PXDNLA1KZ92 1463 aa18.11■□□□□ 0.49
AC004540.1-204ENST00000449537 USP54Q70EL1 1684 aa18.11■□□□□ 0.49
AC004540.1-204ENST00000449537 MPRIPQ6WCQ1 1025 aa18.1■□□□□ 0.49
AC004540.1-204ENST00000449537 SMARCC1Q92922 1105 aaPredicted RBP18.1■□□□□ 0.49
AC004540.1-204ENST00000449537 TAF1LQ8IZX4 1826 aa18.09■□□□□ 0.49
AC004540.1-204ENST00000449537 KCPQ6ZWJ8 1503 aa18.09■□□□□ 0.49
AC004540.1-204ENST00000449537 RAB3GAP2Q9H2M9 1393 aa18.09■□□□□ 0.49
AC004540.1-204ENST00000449537 C10orf71Q711Q0 1435 aa18.08■□□□□ 0.49
AC004540.1-204ENST00000449537 DPEP1P16444 411 aa18.08■□□□□ 0.48
AC004540.1-204ENST00000449537 C4BP0C0L5 1744 aa18.08■□□□□ 0.48
AC004540.1-204ENST00000449537 RNF181Q9P0P0 153 aa18.07■□□□□ 0.48
AC004540.1-204ENST00000449537 CGNL1Q0VF96 1302 aa18.06■□□□□ 0.48
AC004540.1-204ENST00000449537 N4BP2Q86UW6 1770 aaPredicted RBP18.06■□□□□ 0.48
AC004540.1-204ENST00000449537 FAM208AQ9UK61 1670 aaKnown RBP18.05■□□□□ 0.48
AC004540.1-204ENST00000449537 UBR3Q6ZT12 1888 aa18.05■□□□□ 0.48
AC004540.1-204ENST00000449537 SBNO2Q9Y2G9 1366 aa18.04■□□□□ 0.48
AC004540.1-204ENST00000449537 MEGF6O75095 1541 aa18.04■□□□□ 0.48
AC004540.1-204ENST00000449537 AMPHP49418 695 aa18.04■□□□□ 0.48
AC004540.1-204ENST00000449537 RAPGEF4Q8WZA2 1011 aa18.04■□□□□ 0.48
AC004540.1-204ENST00000449537 GNPATO15228 680 aa18.03■□□□□ 0.48
AC004540.1-204ENST00000449537 HDGFL2Q7Z4V5 671 aaPredicted RBP18.03■□□□□ 0.48
AC004540.1-204ENST00000449537 NLGN1Q8N2Q7 840 aa18.03■□□□□ 0.48
AC004540.1-204ENST00000449537 CCDC87Q9NVE4 849 aa18.03■□□□□ 0.48
AC004540.1-204ENST00000449537 TOGARAM1Q9Y4F4 1720 aa18.03■□□□□ 0.48
AC004540.1-204ENST00000449537 KIF13BQ9NQT8 1826 aa18.02■□□□□ 0.48
AC004540.1-204ENST00000449537 VEGFAP15692 232 aaPredicted RBP18.02■□□□□ 0.48
AC004540.1-204ENST00000449537 HOXC9P31274 260 aa18.02■□□□□ 0.48
AC004540.1-204ENST00000449537 MON2Q7Z3U7 1717 aa18.02■□□□□ 0.48
AC004540.1-204ENST00000449537 LINC00116Q8NCU8 138 aa18.02■□□□□ 0.48
AC004540.1-204ENST00000449537 PRDM10Q9NQV6 1147 aa18.02■□□□□ 0.48
AC004540.1-204ENST00000449537 PIM2Q9P1W9 311 aa18.02■□□□□ 0.48
AC004540.1-204ENST00000449537 KCNA3P22001 575 aa18.01■□□□□ 0.47
AC004540.1-204ENST00000449537 TMF1P82094 1093 aa18.01■□□□□ 0.47
AC004540.1-204ENST00000449537 FAM161AQ3B820 660 aa18.01■□□□□ 0.47
AC004540.1-204ENST00000449537 NBPF6Q5VWK0 638 aa18.01■□□□□ 0.47
AC004540.1-204ENST00000449537 TMC1Q8TDI8 760 aa18.01■□□□□ 0.47
AC004540.1-204ENST00000449537 NBPF4Q96M43 638 aa18.01■□□□□ 0.47
AC004540.1-204ENST00000449537 KIAA1551Q9HCM1 1747 aa18.01■□□□□ 0.47
AC004540.1-204ENST00000449537 LOC102724428A0A0B4J2F2 783 aa18■□□□□ 0.47
AC004540.1-204ENST00000449537 TATP17735 454 aaPredicted RBP18■□□□□ 0.47
AC004540.1-204ENST00000449537 SIK1P57059 783 aa18■□□□□ 0.47
AC004540.1-204ENST00000449537 DALRD3Q5D0E6 543 aaKnown RBP18■□□□□ 0.47
AC004540.1-204ENST00000449537 DCAF5Q96JK2 942 aa18■□□□□ 0.47
AC004540.1-204ENST00000449537 PCDH11XQ9BZA7 1347 aa17.99■□□□□ 0.47
AC004540.1-204ENST00000449537 PCDH11YQ9BZA8 1340 aa17.99■□□□□ 0.47
AC004540.1-204ENST00000449537 PIGBQ92521 554 aa17.99■□□□□ 0.47
AC004540.1-204ENST00000449537 TNRC6CQ9HCJ0 1690 aaKnown RBP17.99■□□□□ 0.47
AC004540.1-204ENST00000449537 MAP3K19Q56UN5 1328 aa17.98■□□□□ 0.47
AC004540.1-204ENST00000449537 FOXN1O15353 648 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms