RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 CWC27Q6UX04 472 aaKnown RBP8.57□□□□□ -1.04
BEST1-202ENST00000449131 AEBP1Q8IUX7 1158 aa8.57□□□□□ -1.04
BEST1-202ENST00000449131 PES1O00541 588 aaKnown RBP8.57□□□□□ -1.04
BEST1-202ENST00000449131 TBC1D32Q96NH3 1257 aa8.57□□□□□ -1.04
BEST1-202ENST00000449131 GDPD2Q9HCC8 539 aa8.57□□□□□ -1.04
BEST1-202ENST00000449131 MBIPQ9NS73 344 aa8.57□□□□□ -1.04
BEST1-202ENST00000449131 CYP46A1Q9Y6A2 500 aa8.57□□□□□ -1.04
BEST1-202ENST00000449131 BTBD11A6QL63 1104 aa8.57□□□□□ -1.04
BEST1-202ENST00000449131 RBM25P49756 843 aaKnown RBP8.57□□□□□ -1.04
BEST1-202ENST00000449131 USHBP1Q8N6Y0 703 aa8.57□□□□□ -1.04
BEST1-202ENST00000449131 TSPY26PQ9H489 355 aa8.57□□□□□ -1.04
BEST1-202ENST00000449131 TTC37Q6PGP7 1564 aa8.57□□□□□ -1.04
BEST1-202ENST00000449131 HIP1O00291 1037 aa8.57□□□□□ -1.04
BEST1-202ENST00000449131 PDCP20941 246 aa8.57□□□□□ -1.04
BEST1-202ENST00000449131 TPD52L1Q16890 204 aaPredicted RBP8.57□□□□□ -1.04
BEST1-202ENST00000449131 AACSQ86V21 672 aa8.57□□□□□ -1.04
BEST1-202ENST00000449131 TEX14Q8IWB6 1497 aa8.56□□□□□ -1.04
BEST1-202ENST00000449131 WDR7Q9Y4E6 1490 aa8.56□□□□□ -1.04
BEST1-202ENST00000449131 STK3Q13188 491 aa8.56□□□□□ -1.04
BEST1-202ENST00000449131 SPC24Q8NBT2 197 aa8.56□□□□□ -1.04
BEST1-202ENST00000449131 CCDC39Q9UFE4 941 aa8.56□□□□□ -1.04
BEST1-202ENST00000449131 DTNBO60941 627 aa8.56□□□□□ -1.04
BEST1-202ENST00000449131 CCDC173Q0VFZ6 552 aa8.56□□□□□ -1.04
BEST1-202ENST00000449131 SDF4Q9BRK5 362 aa8.56□□□□□ -1.04
BEST1-202ENST00000449131 WDR33Q9C0J8 1336 aaKnown RBP8.56□□□□□ -1.04
BEST1-202ENST00000449131 SYCE3A1L190 88 aa8.56□□□□□ -1.04
BEST1-202ENST00000449131 MX1P20591 662 aa8.56□□□□□ -1.04
BEST1-202ENST00000449131 CEBPAP49715 358 aaPredicted RBP8.56□□□□□ -1.04
BEST1-202ENST00000449131 ZC3H6P61129 1189 aaKnown RBP8.56□□□□□ -1.04
BEST1-202ENST00000449131 KDM4AO75164 1064 aa8.55□□□□□ -1.04
BEST1-202ENST00000449131 CEBPZQ03701 1054 aaKnown RBP8.55□□□□□ -1.04
BEST1-202ENST00000449131 ANKLE2Q86XL3 938 aa8.55□□□□□ -1.04
BEST1-202ENST00000449131 RRAGDQ9NQL2 400 aaPredicted RBP8.55□□□□□ -1.04
BEST1-202ENST00000449131 AMOTL2Q9Y2J4 779 aa8.55□□□□□ -1.04
BEST1-202ENST00000449131 ARHGEF12Q9NZN5 1544 aa8.55□□□□□ -1.04
BEST1-202ENST00000449131 RNF123Q5XPI4 1314 aa8.55□□□□□ -1.04
BEST1-202ENST00000449131 CFAP65Q6ZU64 1925 aaKnown RBP8.55□□□□□ -1.04
BEST1-202ENST00000449131 ANKRD36BQ8N2N9 1353 aa8.55□□□□□ -1.04
BEST1-202ENST00000449131 TAF7Q15545 349 aaPredicted RBP8.55□□□□□ -1.04
BEST1-202ENST00000449131 BMP2KLQ5H9B9 411 aa8.55□□□□□ -1.04
BEST1-202ENST00000449131 TBC1D9Q6ZT07 1266 aa8.55□□□□□ -1.04
BEST1-202ENST00000449131 RBM27Q9P2N5 1060 aaKnown RBP8.55□□□□□ -1.04
BEST1-202ENST00000449131 IL16Q14005 1332 aa8.55□□□□□ -1.04
BEST1-202ENST00000449131 POLR3AO14802 1390 aaPredicted RBP8.55□□□□□ -1.04
BEST1-202ENST00000449131 FAM177BA6PVY3 158 aa8.55□□□□□ -1.04
BEST1-202ENST00000449131 VPS37DQ86XT2 251 aa8.55□□□□□ -1.04
BEST1-202ENST00000449131 CCAR2Q8N163 923 aaKnown RBP8.55□□□□□ -1.04
BEST1-202ENST00000449131 ZNF526Q8TF50 670 aaPredicted RBP8.55□□□□□ -1.04
BEST1-202ENST00000449131 RBM33Q96EV2 1170 aaKnown RBP8.55□□□□□ -1.04
BEST1-202ENST00000449131 JAKMIP1Q96N16 626 aaKnown RBP8.55□□□□□ -1.04
BEST1-202ENST00000449131 CLSTN1O94985 981 aa8.54□□□□□ -1.04
BEST1-202ENST00000449131 STRN4Q9NRL3 753 aa8.54□□□□□ -1.04
BEST1-202ENST00000449131 G3V3G9 751 aa8.54□□□□□ -1.04
BEST1-202ENST00000449131 TPM3P06753 285 aa8.54□□□□□ -1.04
BEST1-202ENST00000449131 CABP4P57796 275 aa8.54□□□□□ -1.04
BEST1-202ENST00000449131 DCAF8Q5TAQ9 597 aa8.54□□□□□ -1.04
BEST1-202ENST00000449131 LARP1BQ659C4 914 aaKnown RBP8.54□□□□□ -1.04
BEST1-202ENST00000449131 C16orf71Q8IYS4 520 aaPredicted RBP8.54□□□□□ -1.04
BEST1-202ENST00000449131 TRIM5Q9C035 493 aa8.54□□□□□ -1.04
BEST1-202ENST00000449131 TMX4Q9H1E5 349 aaPredicted RBP8.54□□□□□ -1.04
BEST1-202ENST00000449131 SAMD9LQ8IVG5 1584 aa8.54□□□□□ -1.04
BEST1-202ENST00000449131 UHRF1BP1Q6BDS2 1440 aa8.54□□□□□ -1.04
BEST1-202ENST00000449131 RAD21O60216 631 aa8.54□□□□□ -1.04
BEST1-202ENST00000449131 MARCH6O60337 910 aa8.54□□□□□ -1.04
BEST1-202ENST00000449131 HDAC1Q13547 482 aaPredicted RBP8.54□□□□□ -1.04
BEST1-202ENST00000449131 LRRFIP2Q9Y608 721 aaKnown RBP8.54□□□□□ -1.04
BEST1-202ENST00000449131 BLOC1S2Q6QNY1 142 aa8.54□□□□□ -1.04
BEST1-202ENST00000449131 KIF1BPQ96EK5 621 aa8.54□□□□□ -1.04
BEST1-202ENST00000449131 SHANK2Q9UPX8 1470 aa8.53□□□□□ -1.04
BEST1-202ENST00000449131 HOMER1Q86YM7 354 aa8.53□□□□□ -1.04
BEST1-202ENST00000449131 PRDM10Q9NQV6 1147 aa8.53□□□□□ -1.04
BEST1-202ENST00000449131 ZRANB1Q9UGI0 708 aa8.53□□□□□ -1.04
BEST1-202ENST00000449131 ERICH2A1L162 156 aa8.53□□□□□ -1.04
BEST1-202ENST00000449131 LETM1O95202 739 aaPredicted RBP8.53□□□□□ -1.04
BEST1-202ENST00000449131 FLIIQ13045 1269 aa8.53□□□□□ -1.04
BEST1-202ENST00000449131 HSP90AB2PQ58FF8 381 aa8.53□□□□□ -1.04
BEST1-202ENST00000449131 PDRG1Q9NUG6 133 aa8.53□□□□□ -1.04
BEST1-202ENST00000449131 A2MP01023 1474 aa8.53□□□□□ -1.04
BEST1-202ENST00000449131 SAFBQ15424 915 aaKnown RBP eCLIP8.53□□□□□ -1.04
BEST1-202ENST00000449131 ACEP12821 1306 aa8.53□□□□□ -1.04
BEST1-202ENST00000449131 PIK3C2GO75747 1445 aa8.53□□□□□ -1.04
BEST1-202ENST00000449131 NUCB1Q02818 461 aa8.52□□□□□ -1.04
BEST1-202ENST00000449131 C8orf58Q8NAV2 365 aa8.52□□□□□ -1.04
BEST1-202ENST00000449131 POLKQ9UBT6 870 aa8.52□□□□□ -1.04
BEST1-202ENST00000449131 SPG7Q9UQ90 795 aa8.52□□□□□ -1.04
BEST1-202ENST00000449131 COL17A1Q9UMD9 1497 aaPredicted RBP8.52□□□□□ -1.05
BEST1-202ENST00000449131 CDC42BPAQ5VT25 1732 aa8.52□□□□□ -1.05
BEST1-202ENST00000449131 KINO60870 393 aaKnown RBP8.52□□□□□ -1.05
BEST1-202ENST00000449131 ATP2B1P20020 1258 aa8.52□□□□□ -1.05
BEST1-202ENST00000449131 MPRIPQ6WCQ1 1025 aa8.52□□□□□ -1.05
BEST1-202ENST00000449131 TOM1L2Q6ZVM7 507 aa8.52□□□□□ -1.05
BEST1-202ENST00000449131 FMNL2Q96PY5 1086 aa8.52□□□□□ -1.05
BEST1-202ENST00000449131 CASTP20810 708 aaKnown RBP8.52□□□□□ -1.05
BEST1-202ENST00000449131 KRT85P78386 507 aa8.52□□□□□ -1.05
BEST1-202ENST00000449131 KDM2BQ8NHM5 1336 aa8.52□□□□□ -1.05
BEST1-202ENST00000449131 FOXO3O43524 673 aa8.51□□□□□ -1.05
BEST1-202ENST00000449131 GLRX3O76003 335 aaKnown RBP8.51□□□□□ -1.05
BEST1-202ENST00000449131 KRT24Q2M2I5 525 aa8.51□□□□□ -1.05
BEST1-202ENST00000449131 PTPRCP08575 1304 aa8.51□□□□□ -1.05
BEST1-202ENST00000449131 TPM1P09493 284 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms