RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 MCM10Q7L590 875 aa20.44■□□□□ 0.86
SEMA3B-207ENST00000441915 PTPRCP08575 1304 aa20.44■□□□□ 0.86
SEMA3B-207ENST00000441915 ACEP12821 1306 aa20.44■□□□□ 0.86
SEMA3B-207ENST00000441915 ROBO2Q9HCK4 1378 aa20.43■□□□□ 0.86
SEMA3B-207ENST00000441915 FOXD4L1Q9NU39 408 aa20.43■□□□□ 0.86
SEMA3B-207ENST00000441915 RGS12O14924 1447 aa20.43■□□□□ 0.86
SEMA3B-207ENST00000441915 ATP10DQ9P241 1426 aa20.43■□□□□ 0.86
SEMA3B-207ENST00000441915 SKOR2Q2VWA4 1001 aaPredicted RBP20.42■□□□□ 0.86
SEMA3B-207ENST00000441915 CEP85Q6P2H3 762 aa20.42■□□□□ 0.86
SEMA3B-207ENST00000441915 PANK2Q9BZ23 570 aa20.42■□□□□ 0.86
SEMA3B-207ENST00000441915 OVOS2A0A0J9YW53 1432 aa20.42■□□□□ 0.86
SEMA3B-207ENST00000441915 OVOS2Q6IE36 1432 aa20.42■□□□□ 0.86
SEMA3B-207ENST00000441915 HSP90AB2PQ58FF8 381 aa20.41■□□□□ 0.86
SEMA3B-207ENST00000441915 TMEM2Q9UHN6 1383 aa20.41■□□□□ 0.86
SEMA3B-207ENST00000441915 C16orf71Q8IYS4 520 aaPredicted RBP20.41■□□□□ 0.86
SEMA3B-207ENST00000441915 TNRQ92752 1358 aa20.41■□□□□ 0.86
SEMA3B-207ENST00000441915 PLEKHG3A1L390 1219 aa20.4■□□□□ 0.86
SEMA3B-207ENST00000441915 RABEP1Q15276 862 aa20.4■□□□□ 0.86
SEMA3B-207ENST00000441915 RTL1A6NKG5 1358 aa20.4■□□□□ 0.86
SEMA3B-207ENST00000441915 MSH6P52701 1360 aa20.4■□□□□ 0.86
SEMA3B-207ENST00000441915 GRPEL1Q9HAV7 217 aa20.4■□□□□ 0.86
SEMA3B-207ENST00000441915 RRAGDQ9NQL2 400 aaPredicted RBP20.4■□□□□ 0.86
SEMA3B-207ENST00000441915 NUTM2FA1L443 756 aa20.39■□□□□ 0.85
SEMA3B-207ENST00000441915 GAS2L2Q8NHY3 880 aa20.39■□□□□ 0.85
SEMA3B-207ENST00000441915 CASC1Q6TDU7 716 aa20.39■□□□□ 0.85
SEMA3B-207ENST00000441915 USP6P35125 1406 aa20.38■□□□□ 0.85
SEMA3B-207ENST00000441915 SLC4A2P04920 1241 aa20.38■□□□□ 0.85
SEMA3B-207ENST00000441915 MEIS3Q99687 375 aa20.38■□□□□ 0.85
SEMA3B-207ENST00000441915 GOLGA6L22H0YM25 854 aa20.37■□□□□ 0.85
SEMA3B-207ENST00000441915 USP26Q9BXU7 913 aa20.37■□□□□ 0.85
SEMA3B-207ENST00000441915 ADAMTS13Q76LX8 1427 aa20.36■□□□□ 0.85
SEMA3B-207ENST00000441915 OTUD7AQ8TE49 926 aaPredicted RBP20.36■□□□□ 0.85
SEMA3B-207ENST00000441915 USP31Q70CQ4 1352 aa20.36■□□□□ 0.85
SEMA3B-207ENST00000441915 CRB1P82279 1406 aa20.36■□□□□ 0.85
SEMA3B-207ENST00000441915 APBB1O00213 710 aa20.36■□□□□ 0.85
SEMA3B-207ENST00000441915 SOX12O15370 315 aa20.36■□□□□ 0.85
SEMA3B-207ENST00000441915 HMMRO75330 724 aa20.36■□□□□ 0.85
SEMA3B-207ENST00000441915 GLIPR1L2Q4G1C9 344 aa20.36■□□□□ 0.85
SEMA3B-207ENST00000441915 RTF1Q92541 710 aaKnown RBP20.36■□□□□ 0.85
SEMA3B-207ENST00000441915 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.36■□□□□ 0.85
SEMA3B-207ENST00000441915 SDSP20132 328 aa20.35■□□□□ 0.85
SEMA3B-207ENST00000441915 SSFA2P28290 1259 aa20.35■□□□□ 0.85
SEMA3B-207ENST00000441915 TOPAZ1Q8N9V7 1692 aa20.35■□□□□ 0.85
SEMA3B-207ENST00000441915 RGPD1P0DJD0 1748 aa20.35■□□□□ 0.85
SEMA3B-207ENST00000441915 SMARCA5O60264 1052 aaPredicted RBP20.34■□□□□ 0.85
SEMA3B-207ENST00000441915 UBR1Q8IWV7 1749 aa20.34■□□□□ 0.85
SEMA3B-207ENST00000441915 PEAK1Q9H792 1746 aa20.34■□□□□ 0.85
SEMA3B-207ENST00000441915 CLEC17AQ6ZS10 378 aa20.34■□□□□ 0.85
SEMA3B-207ENST00000441915 TSPYL4Q9UJ04 414 aa20.34■□□□□ 0.85
SEMA3B-207ENST00000441915 NALCNQ8IZF0 1738 aa20.34■□□□□ 0.85
SEMA3B-207ENST00000441915 ARHGEF10O15013 1369 aa20.34■□□□□ 0.85
SEMA3B-207ENST00000441915 MIS18AQ9NYP9 233 aa20.33■□□□□ 0.85
SEMA3B-207ENST00000441915 MAP3K19Q56UN5 1328 aa20.33■□□□□ 0.84
SEMA3B-207ENST00000441915 REC8O95072 547 aa20.32■□□□□ 0.84
SEMA3B-207ENST00000441915 CCT4P50991 539 aaKnown RBP20.32■□□□□ 0.84
SEMA3B-207ENST00000441915 MTHFSDQ2M296 383 aaKnown RBP20.32■□□□□ 0.84
SEMA3B-207ENST00000441915 SLC4A10Q6U841 1118 aa20.32■□□□□ 0.84
SEMA3B-207ENST00000441915 PLEKHG1Q9ULL1 1385 aa20.31■□□□□ 0.84
SEMA3B-207ENST00000441915 FOXO3O43524 673 aa20.31■□□□□ 0.84
SEMA3B-207ENST00000441915 NUCB2P80303 420 aa20.31■□□□□ 0.84
SEMA3B-207ENST00000441915 TTC21AQ8NDW8 1320 aa20.31■□□□□ 0.84
SEMA3B-207ENST00000441915 ST18O60284 1047 aa20.3■□□□□ 0.84
SEMA3B-207ENST00000441915 BAG4O95429 457 aaKnown RBP20.3■□□□□ 0.84
SEMA3B-207ENST00000441915 LTKP29376 864 aa20.3■□□□□ 0.84
SEMA3B-207ENST00000441915 GAS2L3Q86XJ1 694 aa20.3■□□□□ 0.84
SEMA3B-207ENST00000441915 FLT4P35916 1363 aa20.3■□□□□ 0.84
SEMA3B-207ENST00000441915 SSH2Q76I76 1423 aa20.3■□□□□ 0.84
SEMA3B-207ENST00000441915 G2E3Q7L622 706 aa20.29■□□□□ 0.84
SEMA3B-207ENST00000441915 SBNO1A3KN83 1393 aa20.28■□□□□ 0.84
SEMA3B-207ENST00000441915 F6X3S4 739 aa20.28■□□□□ 0.84
SEMA3B-207ENST00000441915 CLCN1P35523 988 aa20.28■□□□□ 0.84
SEMA3B-207ENST00000441915 STK31Q9BXU1 1019 aa20.28■□□□□ 0.84
SEMA3B-207ENST00000441915 OSBPL3Q9H4L5 887 aa20.28■□□□□ 0.84
SEMA3B-207ENST00000441915 DDX49Q9Y6V7 483 aaKnown RBP20.28■□□□□ 0.84
SEMA3B-207ENST00000441915 KDRP35968 1356 aa20.27■□□□□ 0.84
SEMA3B-207ENST00000441915 KLHL40Q2TBA0 621 aa20.27■□□□□ 0.84
SEMA3B-207ENST00000441915 ERC2O15083 957 aa20.27■□□□□ 0.84
SEMA3B-207ENST00000441915 SLC26A8Q96RN1 970 aa20.27■□□□□ 0.84
SEMA3B-207ENST00000441915 CWC22Q9HCG8 908 aaKnown RBP20.27■□□□□ 0.84
SEMA3B-207ENST00000441915 GNAI2P04899 355 aa20.26■□□□□ 0.83
SEMA3B-207ENST00000441915 AMPHP49418 695 aa20.26■□□□□ 0.83
SEMA3B-207ENST00000441915 PDE1AP54750 535 aa20.26■□□□□ 0.83
SEMA3B-207ENST00000441915 AK9Q5TCS8 1911 aa20.26■□□□□ 0.83
SEMA3B-207ENST00000441915 FMN2Q9NZ56 1722 aa20.25■□□□□ 0.83
SEMA3B-207ENST00000441915 NGDNQ8NEJ9 315 aaKnown RBP20.25■□□□□ 0.83
SEMA3B-207ENST00000441915 EYA1Q99502 592 aa20.25■□□□□ 0.83
SEMA3B-207ENST00000441915 TRIM44Q96DX7 344 aaPredicted RBP20.25■□□□□ 0.83
SEMA3B-207ENST00000441915 EID1Q9Y6B2 187 aa20.25■□□□□ 0.83
SEMA3B-207ENST00000441915 IGSF1Q8N6C5 1336 aa20.24■□□□□ 0.83
SEMA3B-207ENST00000441915 PTPRUQ92729 1446 aa20.24■□□□□ 0.83
SEMA3B-207ENST00000441915 CYP2E1P05181 493 aaPredicted RBP20.24■□□□□ 0.83
SEMA3B-207ENST00000441915 AMOTL2Q9Y2J4 779 aa20.24■□□□□ 0.83
SEMA3B-207ENST00000441915 IBTKQ9P2D0 1353 aaPredicted RBP20.24■□□□□ 0.83
SEMA3B-207ENST00000441915 HTATSF1O43719 755 aaKnown RBP20.23■□□□□ 0.83
SEMA3B-207ENST00000441915 MCTP1Q6DN14 999 aa20.23■□□□□ 0.83
SEMA3B-207ENST00000441915 EXOC6BQ9Y2D4 811 aa20.23■□□□□ 0.83
SEMA3B-207ENST00000441915 RIMS1Q86UR5 1692 aaKnown RBP20.23■□□□□ 0.83
SEMA3B-207ENST00000441915 CCDC30Q5VVM6 783 aa20.22■□□□□ 0.83
SEMA3B-207ENST00000441915 GNAI3P08754 354 aa20.22■□□□□ 0.83
SEMA3B-207ENST00000441915 FKBP5Q13451 457 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms