RNA–Protein interactions for RNA: ENST00000440919.1

SATB2-204, Transcript of SATB homeobox 2, humanhuman

TSL 1 (best)

Gene SATB2, Length 2,166 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-204ENST00000440919 PANK2Q9BZ23 570 aa21.91■■□□□ 1.1
SATB2-204ENST00000440919 RRAGDQ9NQL2 400 aaPredicted RBP21.91■■□□□ 1.1
SATB2-204ENST00000440919 ATP10DQ9P241 1426 aa21.9■■□□□ 1.1
SATB2-204ENST00000440919 RBM42Q9BTD8 480 aaKnown RBP21.9■■□□□ 1.1
SATB2-204ENST00000440919 EIF4A2Q14240 407 aaKnown RBP21.89■■□□□ 1.1
SATB2-204ENST00000440919 AEBP1Q8IUX7 1158 aa21.89■■□□□ 1.1
SATB2-204ENST00000440919 MRE11P49959 708 aa21.89■■□□□ 1.09
SATB2-204ENST00000440919 GBP4Q96PP9 640 aa21.89■■□□□ 1.09
SATB2-204ENST00000440919 DIP2AQ14689 1571 aa21.88■■□□□ 1.09
SATB2-204ENST00000440919 CEP170BQ9Y4F5 1589 aaPredicted RBP21.88■■□□□ 1.09
SATB2-204ENST00000440919 PTPRUQ92729 1446 aa21.88■■□□□ 1.09
SATB2-204ENST00000440919 SULT6B1Q6IMI4 303 aa21.87■■□□□ 1.09
SATB2-204ENST00000440919 ANKRD44Q8N8A2 993 aa21.87■■□□□ 1.09
SATB2-204ENST00000440919 ISY1Q9ULR0 285 aaKnown RBP21.87■■□□□ 1.09
SATB2-204ENST00000440919 CHL1O00533 1208 aa21.87■■□□□ 1.09
SATB2-204ENST00000440919 HSP90AA1P07900 732 aaKnown RBP21.87■■□□□ 1.09
SATB2-204ENST00000440919 HAP1P54257 671 aaPredicted RBP21.87■■□□□ 1.09
SATB2-204ENST00000440919 KRT24Q2M2I5 525 aa21.87■■□□□ 1.09
SATB2-204ENST00000440919 TTC22Q5TAA0 569 aa21.87■■□□□ 1.09
SATB2-204ENST00000440919 KIAA0232Q92628 1395 aa21.86■■□□□ 1.09
SATB2-204ENST00000440919 OVOS2A0A0J9YW53 1432 aa21.86■■□□□ 1.09
SATB2-204ENST00000440919 OVOS2Q6IE36 1432 aa21.86■■□□□ 1.09
SATB2-204ENST00000440919 TOPAZ1Q8N9V7 1692 aa21.86■■□□□ 1.09
SATB2-204ENST00000440919 AMOTL2Q9Y2J4 779 aa21.86■■□□□ 1.09
SATB2-204ENST00000440919 RGPD1P0DJD0 1748 aa21.86■■□□□ 1.09
SATB2-204ENST00000440919 NALCNQ8IZF0 1738 aa21.85■■□□□ 1.09
SATB2-204ENST00000440919 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.85■■□□□ 1.09
SATB2-204ENST00000440919 EIF5BO60841 1220 aaKnown RBP21.85■■□□□ 1.09
SATB2-204ENST00000440919 PEAK1Q9H792 1746 aa21.85■■□□□ 1.09
SATB2-204ENST00000440919 ADAMTSL3P82987 1691 aa21.84■■□□□ 1.09
SATB2-204ENST00000440919 RPAP2Q8IXW5 612 aaPredicted RBP21.84■■□□□ 1.09
SATB2-204ENST00000440919 GAS2L2Q8NHY3 880 aa21.84■■□□□ 1.09
SATB2-204ENST00000440919 GRPEL1Q9HAV7 217 aa21.84■■□□□ 1.09
SATB2-204ENST00000440919 FOXD4L1Q9NU39 408 aa21.84■■□□□ 1.09
SATB2-204ENST00000440919 TTC21BQ7Z4L5 1316 aa21.84■■□□□ 1.09
SATB2-204ENST00000440919 CEP85Q6P2H3 762 aa21.84■■□□□ 1.09
SATB2-204ENST00000440919 MSH6P52701 1360 aa21.84■■□□□ 1.09
SATB2-204ENST00000440919 C16orf71Q8IYS4 520 aaPredicted RBP21.83■■□□□ 1.09
SATB2-204ENST00000440919 RTL1A6NKG5 1358 aa21.83■■□□□ 1.09
SATB2-204ENST00000440919 PTPRCP08575 1304 aa21.82■■□□□ 1.08
SATB2-204ENST00000440919 PTMSP20962 102 aa21.82■■□□□ 1.08
SATB2-204ENST00000440919 MCM10Q7L590 875 aa21.82■■□□□ 1.08
SATB2-204ENST00000440919 SKOR2Q2VWA4 1001 aaPredicted RBP21.82■■□□□ 1.08
SATB2-204ENST00000440919 RABEP1Q15276 862 aa21.81■■□□□ 1.08
SATB2-204ENST00000440919 CLEC17AQ6ZS10 378 aa21.8■■□□□ 1.08
SATB2-204ENST00000440919 OTUD7AQ8TE49 926 aaPredicted RBP21.8■■□□□ 1.08
SATB2-204ENST00000440919 CRB1P82279 1406 aa21.8■■□□□ 1.08
SATB2-204ENST00000440919 ACEP12821 1306 aa21.8■■□□□ 1.08
SATB2-204ENST00000440919 USP26Q9BXU7 913 aa21.8■■□□□ 1.08
SATB2-204ENST00000440919 SSFA2P28290 1259 aa21.79■■□□□ 1.08
SATB2-204ENST00000440919 USP6P35125 1406 aa21.79■■□□□ 1.08
SATB2-204ENST00000440919 HSP90AB2PQ58FF8 381 aa21.78■■□□□ 1.08
SATB2-204ENST00000440919 MEIS3Q99687 375 aa21.78■■□□□ 1.08
SATB2-204ENST00000440919 USP31Q70CQ4 1352 aa21.78■■□□□ 1.08
SATB2-204ENST00000440919 PLEKHG3A1L390 1219 aa21.78■■□□□ 1.08
SATB2-204ENST00000440919 ZNF142P52746 1687 aaPredicted RBP21.78■■□□□ 1.08
SATB2-204ENST00000440919 ANKLE2Q86XL3 938 aa21.77■■□□□ 1.08
SATB2-204ENST00000440919 GAS2L3Q86XJ1 694 aa21.77■■□□□ 1.07
SATB2-204ENST00000440919 SDSP20132 328 aa21.76■■□□□ 1.07
SATB2-204ENST00000440919 AK9Q5TCS8 1911 aa21.76■■□□□ 1.07
SATB2-204ENST00000440919 SETD1BQ9UPS6 1966 aaKnown RBP21.76■■□□□ 1.07
SATB2-204ENST00000440919 FMN2Q9NZ56 1722 aa21.76■■□□□ 1.07
SATB2-204ENST00000440919 SMARCA5O60264 1052 aaPredicted RBP21.75■■□□□ 1.07
SATB2-204ENST00000440919 XRN1Q8IZH2 1706 aaKnown RBP21.75■■□□□ 1.07
SATB2-204ENST00000440919 ARHGEF10O15013 1369 aa21.74■■□□□ 1.07
SATB2-204ENST00000440919 SLC4A2P04920 1241 aa21.74■■□□□ 1.07
SATB2-204ENST00000440919 CLCN1P35523 988 aa21.74■■□□□ 1.07
SATB2-204ENST00000440919 SSH2Q76I76 1423 aa21.74■■□□□ 1.07
SATB2-204ENST00000440919 NUTM2FA1L443 756 aa21.72■■□□□ 1.07
SATB2-204ENST00000440919 BAG4O95429 457 aaKnown RBP21.72■■□□□ 1.07
SATB2-204ENST00000440919 MAP3K19Q56UN5 1328 aa21.72■■□□□ 1.07
SATB2-204ENST00000440919 GOLGA6L22H0YM25 854 aa21.72■■□□□ 1.07
SATB2-204ENST00000440919 APBB1O00213 710 aa21.72■■□□□ 1.07
SATB2-204ENST00000440919 CASC1Q6TDU7 716 aa21.72■■□□□ 1.07
SATB2-204ENST00000440919 MIS18AQ9NYP9 233 aa21.71■■□□□ 1.07
SATB2-204ENST00000440919 KCNA6P17658 529 aa21.7■■□□□ 1.06
SATB2-204ENST00000440919 FOXO3O43524 673 aa21.7■■□□□ 1.06
SATB2-204ENST00000440919 HMMRO75330 724 aa21.7■■□□□ 1.06
SATB2-204ENST00000440919 CYP2E1P05181 493 aaPredicted RBP21.7■■□□□ 1.06
SATB2-204ENST00000440919 KLHL40Q2TBA0 621 aa21.7■■□□□ 1.06
SATB2-204ENST00000440919 MTHFSDQ2M296 383 aaKnown RBP21.69■■□□□ 1.06
SATB2-204ENST00000440919 G2E3Q7L622 706 aa21.69■■□□□ 1.06
SATB2-204ENST00000440919 KDRP35968 1356 aa21.69■■□□□ 1.06
SATB2-204ENST00000440919 IBTKQ9P2D0 1353 aaPredicted RBP21.69■■□□□ 1.06
SATB2-204ENST00000440919 NUCB2P80303 420 aa21.68■■□□□ 1.06
SATB2-204ENST00000440919 OSBPL3Q9H4L5 887 aa21.68■■□□□ 1.06
SATB2-204ENST00000440919 TSPYL4Q9UJ04 414 aa21.68■■□□□ 1.06
SATB2-204ENST00000440919 SOX12O15370 315 aa21.68■■□□□ 1.06
SATB2-204ENST00000440919 REC8O95072 547 aa21.67■■□□□ 1.06
SATB2-204ENST00000440919 CCT4P50991 539 aaKnown RBP21.67■■□□□ 1.06
SATB2-204ENST00000440919 FLT4P35916 1363 aa21.67■■□□□ 1.06
SATB2-204ENST00000440919 F6X3S4 739 aa21.67■■□□□ 1.06
SATB2-204ENST00000440919 RTF1Q92541 710 aaKnown RBP21.67■■□□□ 1.06
SATB2-204ENST00000440919 SBNO1A3KN83 1393 aa21.66■■□□□ 1.06
SATB2-204ENST00000440919 TTC21AQ8NDW8 1320 aa21.66■■□□□ 1.06
SATB2-204ENST00000440919 TUBGCP6Q96RT7 1819 aa21.66■■□□□ 1.06
SATB2-204ENST00000440919 ST18O60284 1047 aa21.66■■□□□ 1.06
SATB2-204ENST00000440919 SLC4A10Q6U841 1118 aa21.66■■□□□ 1.06
SATB2-204ENST00000440919 DDX49Q9Y6V7 483 aaKnown RBP21.66■■□□□ 1.06
SATB2-204ENST00000440919 ERC2O15083 957 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms