RNA–Protein interactions for RNA: ENST00000440447.2

PTX4-202, Transcript of pentraxin 4, humanhuman

TSL 5 BASIC

Gene PTX4, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-202ENST00000440447 FAM196AQ6ZSG2 479 aa24.5■■□□□ 1.51
PTX4-202ENST00000440447 MARCH10Q8NA82 808 aaPredicted RBP24.5■■□□□ 1.51
PTX4-202ENST00000440447 AEBP1Q8IUX7 1158 aa24.49■■□□□ 1.51
PTX4-202ENST00000440447 DDX54Q8TDD1 881 aaKnown RBP24.48■■□□□ 1.51
PTX4-202ENST00000440447 KDRP35968 1356 aa24.46■■□□□ 1.51
PTX4-202ENST00000440447 HMOX1P09601 288 aa24.46■■□□□ 1.51
PTX4-202ENST00000440447 SPG7Q9UQ90 795 aa24.46■■□□□ 1.51
PTX4-202ENST00000440447 RGPD1P0DJD0 1748 aa24.46■■□□□ 1.51
PTX4-202ENST00000440447 UPF1Q92900 1129 aaKnown RBP eCLIP24.45■■□□□ 1.5
PTX4-202ENST00000440447 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.45■■□□□ 1.5
PTX4-202ENST00000440447 PLEKHG2Q9H7P9 1386 aa24.44■■□□□ 1.5
PTX4-202ENST00000440447 PCDH11XQ9BZA7 1347 aa24.43■■□□□ 1.5
PTX4-202ENST00000440447 PCDH11YQ9BZA8 1340 aa24.43■■□□□ 1.5
PTX4-202ENST00000440447 U2AF1L5P0DN76 240 aaPredicted RBP24.43■■□□□ 1.5
PTX4-202ENST00000440447 U2AF1Q01081 240 aaKnown RBP eCLIP24.43■■□□□ 1.5
PTX4-202ENST00000440447 PLEKHO1Q53GL0 409 aaPredicted RBP24.43■■□□□ 1.5
PTX4-202ENST00000440447 AMOTQ4VCS5 1084 aa24.41■■□□□ 1.5
PTX4-202ENST00000440447 CCDC125Q86Z20 511 aa24.41■■□□□ 1.5
PTX4-202ENST00000440447 BCL9O00512 1426 aa24.4■■□□□ 1.5
PTX4-202ENST00000440447 SF3B2Q13435 895 aaKnown RBP24.39■■□□□ 1.49
PTX4-202ENST00000440447 CYP27B1O15528 508 aa24.38■■□□□ 1.49
PTX4-202ENST00000440447 TRIM37O94972 964 aa24.38■■□□□ 1.49
PTX4-202ENST00000440447 IFNL2Q8IZJ0 200 aa24.37■■□□□ 1.49
PTX4-202ENST00000440447 PKD1L3Q7Z443 1732 aa24.36■■□□□ 1.49
PTX4-202ENST00000440447 FCHSD2O94868 740 aa24.36■■□□□ 1.49
PTX4-202ENST00000440447 RSPH6AQ9H0K4 717 aa24.36■■□□□ 1.49
PTX4-202ENST00000440447 PRKAR2BP31323 418 aa24.35■■□□□ 1.49
PTX4-202ENST00000440447 ZNF530Q6P9A1 599 aaPredicted RBP24.35■■□□□ 1.49
PTX4-202ENST00000440447 ACSBG1Q96GR2 724 aa24.35■■□□□ 1.49
PTX4-202ENST00000440447 PHKG2P15735 406 aa24.34■■□□□ 1.49
PTX4-202ENST00000440447 SHANK3Q9BYB0 1731 aa24.34■■□□□ 1.49
PTX4-202ENST00000440447 EP400Q96L91 3159 aa24.33■■□□□ 1.49
PTX4-202ENST00000440447 C1orf141Q5JVX7 400 aa24.33■■□□□ 1.49
PTX4-202ENST00000440447 BCL11BQ9C0K0 894 aaPredicted RBP24.33■■□□□ 1.49
PTX4-202ENST00000440447 WDR43Q15061 677 aaKnown RBP eCLIP24.32■■□□□ 1.48
PTX4-202ENST00000440447 NKX1-1Q15270 411 aaPredicted RBP24.32■■□□□ 1.48
PTX4-202ENST00000440447 HSP90AB1P08238 724 aaKnown RBP24.31■■□□□ 1.48
PTX4-202ENST00000440447 PNNQ9H307 717 aaKnown RBP24.31■■□□□ 1.48
PTX4-202ENST00000440447 KCNQ2O43526 872 aa24.3■■□□□ 1.48
PTX4-202ENST00000440447 NEFMP07197 916 aa24.3■■□□□ 1.48
PTX4-202ENST00000440447 MTHFSDQ2M296 383 aaKnown RBP24.3■■□□□ 1.48
PTX4-202ENST00000440447 APBA3O96018 575 aa24.29■■□□□ 1.48
PTX4-202ENST00000440447 BAG6P46379 1132 aa24.29■■□□□ 1.48
PTX4-202ENST00000440447 SYTL4Q96C24 671 aaPredicted RBP24.29■■□□□ 1.48
PTX4-202ENST00000440447 PRIM1P49642 420 aaKnown RBP24.28■■□□□ 1.48
PTX4-202ENST00000440447 AKAP4Q5JQC9 854 aa24.28■■□□□ 1.48
PTX4-202ENST00000440447 GAS2L2Q8NHY3 880 aa24.28■■□□□ 1.48
PTX4-202ENST00000440447 CCDC184Q52MB2 194 aa24.27■■□□□ 1.48
PTX4-202ENST00000440447 DIEXFQ68CQ4 756 aaKnown RBP24.27■■□□□ 1.48
PTX4-202ENST00000440447 PTF1AQ7RTS3 328 aa24.27■■□□□ 1.48
PTX4-202ENST00000440447 PHACTR3Q96KR7 559 aa24.27■■□□□ 1.48
PTX4-202ENST00000440447 DCAF5Q96JK2 942 aa24.26■■□□□ 1.47
PTX4-202ENST00000440447 MRS2Q9HD23 443 aa24.26■■□□□ 1.47
PTX4-202ENST00000440447 DEFB132Q7Z7B7 95 aa24.25■■□□□ 1.47
PTX4-202ENST00000440447 SBF2Q86WG5 1849 aa24.24■■□□□ 1.47
PTX4-202ENST00000440447 PLEKHF1Q96S99 279 aa24.24■■□□□ 1.47
PTX4-202ENST00000440447 MPRIPQ6WCQ1 1025 aa24.23■■□□□ 1.47
PTX4-202ENST00000440447 ADAMTS8Q9UP79 889 aa24.23■■□□□ 1.47
PTX4-202ENST00000440447 MAPK8IP3Q9UPT6 1336 aa24.23■■□□□ 1.47
PTX4-202ENST00000440447 NHSQ6T4R5 1651 aa24.23■■□□□ 1.47
PTX4-202ENST00000440447 TNS1Q9HBL0 1735 aaKnown RBP24.22■■□□□ 1.47
PTX4-202ENST00000440447 EN1Q05925 392 aaPredicted RBP24.22■■□□□ 1.47
PTX4-202ENST00000440447 DOT1LQ8TEK3 1739 aa24.21■■□□□ 1.47
PTX4-202ENST00000440447 ERVV-2B6SEH9 535 aa24.21■■□□□ 1.47
PTX4-202ENST00000440447 GNAT3A8MTJ3 354 aa24.2■■□□□ 1.46
PTX4-202ENST00000440447 PLSCR1O15162 318 aa24.2■■□□□ 1.46
PTX4-202ENST00000440447 TMOD3Q9NYL9 352 aa24.2■■□□□ 1.46
PTX4-202ENST00000440447 KDM6AO15550 1401 aaPredicted RBP24.19■■□□□ 1.46
PTX4-202ENST00000440447 MAP3K5Q99683 1374 aa24.19■■□□□ 1.46
PTX4-202ENST00000440447 RNMTO43148 476 aaKnown RBP24.18■■□□□ 1.46
PTX4-202ENST00000440447 CABP4P57796 275 aa24.18■■□□□ 1.46
PTX4-202ENST00000440447 CAMKK2Q96RR4 588 aa24.18■■□□□ 1.46
PTX4-202ENST00000440447 EZH2Q15910 746 aaKnown RBP24.17■■□□□ 1.46
PTX4-202ENST00000440447 CCDC146Q8IYE0 955 aa24.17■■□□□ 1.46
PTX4-202ENST00000440447 PNISRQ8TF01 805 aaKnown RBP24.17■■□□□ 1.46
PTX4-202ENST00000440447 PIGBQ92521 554 aa24.17■■□□□ 1.46
PTX4-202ENST00000440447 RUNDC1Q96C34 613 aa24.17■■□□□ 1.46
PTX4-202ENST00000440447 LGR6Q9HBX8 967 aa24.17■■□□□ 1.46
PTX4-202ENST00000440447 TOGARAM1Q9Y4F4 1720 aa24.16■■□□□ 1.46
PTX4-202ENST00000440447 KAT6BQ8WYB5 2073 aa24.16■■□□□ 1.46
PTX4-202ENST00000440447 NFE2L2Q16236 605 aa24.16■■□□□ 1.46
PTX4-202ENST00000440447 RTF1Q92541 710 aaKnown RBP24.16■■□□□ 1.46
PTX4-202ENST00000440447 BTAF1O14981 1849 aa24.13■■□□□ 1.45
PTX4-202ENST00000440447 HTATSF1O43719 755 aaKnown RBP24.13■■□□□ 1.45
PTX4-202ENST00000440447 NFATC2IPQ8NCF5 419 aa24.13■■□□□ 1.45
PTX4-202ENST00000440447 IL17REQ8NFR9 667 aa24.13■■□□□ 1.45
PTX4-202ENST00000440447 SLC52A2Q9HAB3 445 aa24.13■■□□□ 1.45
PTX4-202ENST00000440447 SMARCC1Q92922 1105 aaPredicted RBP24.12■■□□□ 1.45
PTX4-202ENST00000440447 CCER2I3L3R5 266 aa24.11■■□□□ 1.45
PTX4-202ENST00000440447 TXNRD1Q16881 649 aa24.11■■□□□ 1.45
PTX4-202ENST00000440447 TMPOP42166 694 aaKnown RBP24.1■■□□□ 1.45
PTX4-202ENST00000440447 TEFQ10587 303 aa24.1■■□□□ 1.45
PTX4-202ENST00000440447 RIPK4P57078 832 aa24.09■■□□□ 1.45
PTX4-202ENST00000440447 PROM2Q8N271 834 aa24.09■■□□□ 1.45
PTX4-202ENST00000440447 ASAP1Q9ULH1 1129 aa24.09■■□□□ 1.45
PTX4-202ENST00000440447 ITGB4P16144 1822 aa24.09■■□□□ 1.45
PTX4-202ENST00000440447 PALLDQ8WX93 1383 aa24.08■■□□□ 1.45
PTX4-202ENST00000440447 MCM10Q7L590 875 aa24.08■■□□□ 1.45
PTX4-202ENST00000440447 FAM9BQ8IZU0 186 aa24.08■■□□□ 1.45
PTX4-202ENST00000440447 ATG3Q9NT62 314 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms