RNA–Protein interactions for RNA: ENST00000440284.6

ACSM3-202, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 1 (best) BASIC

Gene ACSM3, Length 1,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-202ENST00000440284 CHL1O00533 1208 aa12.98□□□□□ -0.33
ACSM3-202ENST00000440284 HOXC9P31274 260 aa12.98□□□□□ -0.33
ACSM3-202ENST00000440284 PSME1Q06323 249 aa12.98□□□□□ -0.33
ACSM3-202ENST00000440284 NPM2Q86SE8 214 aaKnown RBP12.98□□□□□ -0.33
ACSM3-202ENST00000440284 FAM83GA6ND36 823 aa12.98□□□□□ -0.33
ACSM3-202ENST00000440284 C8orf34Q49A92 452 aa12.98□□□□□ -0.33
ACSM3-202ENST00000440284 C14orf37Q86TY3 774 aa12.98□□□□□ -0.33
ACSM3-202ENST00000440284 EYA1Q99502 592 aa12.98□□□□□ -0.33
ACSM3-202ENST00000440284 ZBTB40Q9NUA8 1239 aa12.98□□□□□ -0.33
ACSM3-202ENST00000440284 PDZRN3Q9UPQ7 1066 aa12.98□□□□□ -0.33
ACSM3-202ENST00000440284 NWD1Q149M9 1564 aa12.97□□□□□ -0.33
ACSM3-202ENST00000440284 ESCO1Q5FWF5 840 aa12.97□□□□□ -0.33
ACSM3-202ENST00000440284 DCTN1Q14203 1278 aa12.96□□□□□ -0.33
ACSM3-202ENST00000440284 SKAP1Q86WV1 359 aa12.96□□□□□ -0.33
ACSM3-202ENST00000440284 TSPYL6Q8N831 410 aa12.96□□□□□ -0.33
ACSM3-202ENST00000440284 C8orf58Q8NAV2 365 aa12.96□□□□□ -0.33
ACSM3-202ENST00000440284 BABAM1Q9NWV8 329 aa12.96□□□□□ -0.33
ACSM3-202ENST00000440284 ABCC4O15439 1325 aa12.95□□□□□ -0.34
ACSM3-202ENST00000440284 SOS1Q07889 1333 aaPredicted RBP12.95□□□□□ -0.34
ACSM3-202ENST00000440284 MTHFSDQ2M296 383 aaKnown RBP12.95□□□□□ -0.34
ACSM3-202ENST00000440284 IP6K1Q92551 441 aa12.95□□□□□ -0.34
ACSM3-202ENST00000440284 CRB1P82279 1406 aa12.94□□□□□ -0.34
ACSM3-202ENST00000440284 PTPRCP08575 1304 aa12.94□□□□□ -0.34
ACSM3-202ENST00000440284 ELL2O00472 640 aaPredicted RBP12.93□□□□□ -0.34
ACSM3-202ENST00000440284 ZBTB7BO15156 539 aaPredicted RBP12.93□□□□□ -0.34
ACSM3-202ENST00000440284 MCM10Q7L590 875 aa12.93□□□□□ -0.34
ACSM3-202ENST00000440284 PROSER2Q86WR7 435 aaPredicted RBP12.93□□□□□ -0.34
ACSM3-202ENST00000440284 SMC5Q8IY18 1101 aa12.93□□□□□ -0.34
ACSM3-202ENST00000440284 NCOA3Q9Y6Q9 1424 aa12.93□□□□□ -0.34
ACSM3-202ENST00000440284 GNAT3A8MTJ3 354 aa12.93□□□□□ -0.34
ACSM3-202ENST00000440284 GCC1Q96CN9 775 aa12.93□□□□□ -0.34
ACSM3-202ENST00000440284 MARF1Q9Y4F3 1742 aaKnown RBP12.92□□□□□ -0.34
ACSM3-202ENST00000440284 NUTM2GQ5VZR2 741 aa12.92□□□□□ -0.34
ACSM3-202ENST00000440284 CHMP4AQ9BY43 222 aa12.92□□□□□ -0.34
ACSM3-202ENST00000440284 C19orf44Q9H6X5 657 aa12.92□□□□□ -0.34
ACSM3-202ENST00000440284 TSPYL4Q9UJ04 414 aa12.92□□□□□ -0.34
ACSM3-202ENST00000440284 SP7Q8TDD2 431 aaPredicted RBP12.91□□□□□ -0.34
ACSM3-202ENST00000440284 UPF2Q9HAU5 1272 aaKnown RBP12.91□□□□□ -0.34
ACSM3-202ENST00000440284 DAXXQ9UER7 740 aaPredicted RBP12.91□□□□□ -0.34
ACSM3-202ENST00000440284 DSG3P32926 999 aa12.9□□□□□ -0.34
ACSM3-202ENST00000440284 KIF1AQ12756 1690 aa12.9□□□□□ -0.34
ACSM3-202ENST00000440284 MAP3K5Q99683 1374 aa12.89□□□□□ -0.35
ACSM3-202ENST00000440284 INTS3Q68E01 1043 aaKnown RBP12.89□□□□□ -0.35
ACSM3-202ENST00000440284 NFAT5O94916 1531 aa12.89□□□□□ -0.35
ACSM3-202ENST00000440284 KRT28Q7Z3Y7 464 aa12.88□□□□□ -0.35
ACSM3-202ENST00000440284 LTV1Q96GA3 475 aaPredicted RBP12.88□□□□□ -0.35
ACSM3-202ENST00000440284 PHRF1Q9P1Y6 1649 aaKnown RBP12.88□□□□□ -0.35
ACSM3-202ENST00000440284 VIRMAQ69YN4 1812 aaKnown RBP12.88□□□□□ -0.35
ACSM3-202ENST00000440284 SLIT3O75094 1523 aa12.88□□□□□ -0.35
ACSM3-202ENST00000440284 FOXO3O43524 673 aa12.88□□□□□ -0.35
ACSM3-202ENST00000440284 NUCB1Q02818 461 aa12.88□□□□□ -0.35
ACSM3-202ENST00000440284 TAF7Q15545 349 aaPredicted RBP12.88□□□□□ -0.35
ACSM3-202ENST00000440284 RBM33Q96EV2 1170 aaKnown RBP12.88□□□□□ -0.35
ACSM3-202ENST00000440284 STK31Q9BXU1 1019 aa12.88□□□□□ -0.35
ACSM3-202ENST00000440284 DCCP43146 1447 aa12.87□□□□□ -0.35
ACSM3-202ENST00000440284 C1orf167Q5SNV9 1468 aa12.87□□□□□ -0.35
ACSM3-202ENST00000440284 ATF3P18847 181 aa12.87□□□□□ -0.35
ACSM3-202ENST00000440284 PLEKHO1Q53GL0 409 aaPredicted RBP12.87□□□□□ -0.35
ACSM3-202ENST00000440284 RPAP2Q8IXW5 612 aaPredicted RBP12.87□□□□□ -0.35
ACSM3-202ENST00000440284 ORAI2Q96SN7 254 aa12.87□□□□□ -0.35
ACSM3-202ENST00000440284 MST1RQ04912 1400 aa12.87□□□□□ -0.35
ACSM3-202ENST00000440284 LTN1O94822 1766 aa12.86□□□□□ -0.35
ACSM3-202ENST00000440284 EIF5BO60841 1220 aaKnown RBP12.86□□□□□ -0.35
ACSM3-202ENST00000440284 GCP02774 474 aa12.86□□□□□ -0.35
ACSM3-202ENST00000440284 AMOTQ4VCS5 1084 aa12.86□□□□□ -0.35
ACSM3-202ENST00000440284 CCDC30Q5VVM6 783 aa12.86□□□□□ -0.35
ACSM3-202ENST00000440284 ARHGEF25Q86VW2 580 aa12.86□□□□□ -0.35
ACSM3-202ENST00000440284 USP19O94966 1318 aa12.86□□□□□ -0.35
ACSM3-202ENST00000440284 LRRC37A3O60309 1634 aa12.85□□□□□ -0.35
ACSM3-202ENST00000440284 CCT4P50991 539 aaKnown RBP12.85□□□□□ -0.35
ACSM3-202ENST00000440284 CHD1LQ86WJ1 897 aa12.85□□□□□ -0.35
ACSM3-202ENST00000440284 MSH6P52701 1360 aa12.84□□□□□ -0.35
ACSM3-202ENST00000440284 BECN1Q14457 450 aa12.83□□□□□ -0.35
ACSM3-202ENST00000440284 AKAP4Q5JQC9 854 aa12.83□□□□□ -0.35
ACSM3-202ENST00000440284 NBPF6Q5VWK0 638 aa12.83□□□□□ -0.35
ACSM3-202ENST00000440284 CADPS2Q86UW7 1296 aa12.83□□□□□ -0.35
ACSM3-202ENST00000440284 NBPF4Q96M43 638 aa12.83□□□□□ -0.35
ACSM3-202ENST00000440284 ZBTB7CA1YPR0 619 aa12.83□□□□□ -0.36
ACSM3-202ENST00000440284 KRT24Q2M2I5 525 aa12.83□□□□□ -0.36
ACSM3-202ENST00000440284 IL17REQ8NFR9 667 aa12.83□□□□□ -0.36
ACSM3-202ENST00000440284 HOXB7P09629 217 aa12.82□□□□□ -0.36
ACSM3-202ENST00000440284 ANKRD45Q5TZF3 282 aa12.82□□□□□ -0.36
ACSM3-202ENST00000440284 LMOD2Q6P5Q4 547 aa12.82□□□□□ -0.36
ACSM3-202ENST00000440284 ANKRD44Q8N8A2 993 aa12.82□□□□□ -0.36
ACSM3-202ENST00000440284 MIS18AQ9NYP9 233 aa12.82□□□□□ -0.36
ACSM3-202ENST00000440284 TRPM3Q9HCF6 1732 aaPredicted RBP12.82□□□□□ -0.36
ACSM3-202ENST00000440284 CEMIPQ8WUJ3 1361 aa12.82□□□□□ -0.36
ACSM3-202ENST00000440284 RGS12O14924 1447 aa12.81□□□□□ -0.36
ACSM3-202ENST00000440284 NCAPD2Q15021 1401 aa12.81□□□□□ -0.36
ACSM3-202ENST00000440284 HMMRO75330 724 aa12.81□□□□□ -0.36
ACSM3-202ENST00000440284 C1orf141Q5JVX7 400 aa12.81□□□□□ -0.36
ACSM3-202ENST00000440284 ANKRD24Q8TF21 1146 aa12.81□□□□□ -0.36
ACSM3-202ENST00000440284 DCTPP1Q9H773 170 aa12.81□□□□□ -0.36
ACSM3-202ENST00000440284 TMEM94Q12767 1356 aa12.81□□□□□ -0.36
ACSM3-202ENST00000440284 USHBP1Q8N6Y0 703 aa12.8□□□□□ -0.36
ACSM3-202ENST00000440284 LNPKQ9C0E8 428 aa12.8□□□□□ -0.36
ACSM3-202ENST00000440284 C1orf115Q9H7X2 142 aa12.8□□□□□ -0.36
ACSM3-202ENST00000440284 NPHP3Q7Z494 1330 aa12.8□□□□□ -0.36
ACSM3-202ENST00000440284 OVOS2A0A0G2JMS6 1433 aa12.8□□□□□ -0.36
ACSM3-202ENST00000440284 TEFQ10587 303 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms