RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 SRCIN1Q9C0H9 1055 aa8.95□□□□□ -0.98
CPSF6-202ENST00000435070 CALCOCO1Q9P1Z2 691 aa8.95□□□□□ -0.98
CPSF6-202ENST00000435070 TMEM132EQ6IEE7 984 aa8.94□□□□□ -0.98
CPSF6-202ENST00000435070 LUZP1Q86V48 1076 aa8.94□□□□□ -0.98
CPSF6-202ENST00000435070 RILPL2Q969X0 211 aa8.94□□□□□ -0.98
CPSF6-202ENST00000435070 SYNMO15061 1565 aa8.94□□□□□ -0.98
CPSF6-202ENST00000435070 ZNF215Q9UL58 517 aaPredicted RBP8.94□□□□□ -0.98
CPSF6-202ENST00000435070 KMT5BQ4FZB7 885 aa8.94□□□□□ -0.98
CPSF6-202ENST00000435070 TRIM5Q9C035 493 aa8.94□□□□□ -0.98
CPSF6-202ENST00000435070 TRMT1Q9NXH9 659 aaKnown RBP8.94□□□□□ -0.98
CPSF6-202ENST00000435070 HNRNPH2P55795 449 aaKnown RBP8.93□□□□□ -0.98
CPSF6-202ENST00000435070 POLR3GO15318 223 aaPredicted RBP8.93□□□□□ -0.98
CPSF6-202ENST00000435070 NUP160Q12769 1436 aa8.93□□□□□ -0.98
CPSF6-202ENST00000435070 ELF2Q15723 593 aa8.93□□□□□ -0.98
CPSF6-202ENST00000435070 ADGRF5Q8IZF2 1346 aa8.93□□□□□ -0.98
CPSF6-202ENST00000435070 SYTL4Q96C24 671 aaPredicted RBP8.93□□□□□ -0.98
CPSF6-202ENST00000435070 SMTNL1A8MU46 457 aa8.93□□□□□ -0.98
CPSF6-202ENST00000435070 FBLN1P23142 703 aa8.93□□□□□ -0.98
CPSF6-202ENST00000435070 CKAP2LQ8IYA6 745 aa8.93□□□□□ -0.98
CPSF6-202ENST00000435070 MORC2Q9Y6X9 1032 aaPredicted RBP8.93□□□□□ -0.98
CPSF6-202ENST00000435070 ARHGAP31Q2M1Z3 1444 aa8.93□□□□□ -0.98
CPSF6-202ENST00000435070 KANK1Q14678 1352 aa8.92□□□□□ -0.98
CPSF6-202ENST00000435070 WDR33Q9C0J8 1336 aaKnown RBP8.92□□□□□ -0.98
CPSF6-202ENST00000435070 NOS1P29475 1434 aa8.92□□□□□ -0.98
CPSF6-202ENST00000435070 HMOX1P09601 288 aa8.92□□□□□ -0.98
CPSF6-202ENST00000435070 KRT24Q2M2I5 525 aa8.92□□□□□ -0.98
CPSF6-202ENST00000435070 FBXO38Q6PIJ6 1188 aa8.92□□□□□ -0.98
CPSF6-202ENST00000435070 APPP05067 770 aa8.91□□□□□ -0.98
CPSF6-202ENST00000435070 MRPL50Q8N5N7 158 aaKnown RBP8.91□□□□□ -0.98
CPSF6-202ENST00000435070 NEK11Q8NG66 645 aa8.91□□□□□ -0.98
CPSF6-202ENST00000435070 DCTPP1Q9H773 170 aa8.91□□□□□ -0.98
CPSF6-202ENST00000435070 TRHP20396 242 aaPredicted RBP8.91□□□□□ -0.98
CPSF6-202ENST00000435070 NOL10Q9BSC4 688 aaKnown RBP8.91□□□□□ -0.98
CPSF6-202ENST00000435070 ANKRD36BQ8N2N9 1353 aa8.91□□□□□ -0.98
CPSF6-202ENST00000435070 ABCC11Q96J66 1382 aa8.91□□□□□ -0.98
CPSF6-202ENST00000435070 IQSEC2Q5JU85 1478 aa8.91□□□□□ -0.98
CPSF6-202ENST00000435070 CD109Q6YHK3 1445 aa8.91□□□□□ -0.98
CPSF6-202ENST00000435070 VAMP4O75379 141 aa8.91□□□□□ -0.98
CPSF6-202ENST00000435070 CEP135Q66GS9 1140 aa8.91□□□□□ -0.98
CPSF6-202ENST00000435070 DNM1Q05193 864 aaKnown RBP8.91□□□□□ -0.98
CPSF6-202ENST00000435070 NUTM2DQ5VT03 806 aaPredicted RBP8.91□□□□□ -0.98
CPSF6-202ENST00000435070 RAPGEF6Q8TEU7 1601 aa8.91□□□□□ -0.98
CPSF6-202ENST00000435070 DISP1Q96F81 1524 aa8.91□□□□□ -0.98
CPSF6-202ENST00000435070 MCCP23508 829 aa8.9□□□□□ -0.98
CPSF6-202ENST00000435070 ARID5BQ14865 1188 aa8.9□□□□□ -0.98
CPSF6-202ENST00000435070 ALDH1L2Q3SY69 923 aa8.9□□□□□ -0.98
CPSF6-202ENST00000435070 ZNF397Q8NF99 534 aaPredicted RBP8.9□□□□□ -0.98
CPSF6-202ENST00000435070 VPS37CA5D8V6 355 aaPredicted RBP8.9□□□□□ -0.98
CPSF6-202ENST00000435070 UBE2HP62256 183 aa8.9□□□□□ -0.98
CPSF6-202ENST00000435070 RBM6P78332 1123 aaKnown RBP8.9□□□□□ -0.98
CPSF6-202ENST00000435070 MLECQ14165 292 aa8.9□□□□□ -0.98
CPSF6-202ENST00000435070 CFAP44Q96MT7 982 aa8.9□□□□□ -0.98
CPSF6-202ENST00000435070 ERVK-7P63135 1459 aa8.9□□□□□ -0.98
CPSF6-202ENST00000435070 FAM173BQ6P4H8 233 aa8.9□□□□□ -0.98
CPSF6-202ENST00000435070 CABP2Q9NPB3 220 aa8.9□□□□□ -0.98
CPSF6-202ENST00000435070 RSPH14Q9UHP6 348 aa8.9□□□□□ -0.98
CPSF6-202ENST00000435070 EIF2AK4Q9P2K8 1649 aaKnown RBP8.9□□□□□ -0.98
CPSF6-202ENST00000435070 CFAP74Q9C0B2 1584 aa8.9□□□□□ -0.99
CPSF6-202ENST00000435070 TPM3P06753 285 aa8.9□□□□□ -0.99
CPSF6-202ENST00000435070 CCDC192P0DO97 292 aa8.9□□□□□ -0.99
CPSF6-202ENST00000435070 PRKAR2BP31323 418 aa8.9□□□□□ -0.99
CPSF6-202ENST00000435070 FERMT3Q86UX7 667 aa8.9□□□□□ -0.99
CPSF6-202ENST00000435070 DDX54Q8TDD1 881 aaKnown RBP8.9□□□□□ -0.99
CPSF6-202ENST00000435070 PLEKHF1Q96S99 279 aa8.9□□□□□ -0.99
CPSF6-202ENST00000435070 FEZ2Q9UHY8 353 aaPredicted RBP8.9□□□□□ -0.99
CPSF6-202ENST00000435070 USP27XA6NNY8 438 aa8.9□□□□□ -0.99
CPSF6-202ENST00000435070 C10orf67Q8IYJ2 551 aa8.9□□□□□ -0.99
CPSF6-202ENST00000435070 CACTINQ8WUQ7 758 aaKnown RBP8.9□□□□□ -0.99
CPSF6-202ENST00000435070 ITSN2Q9NZM3 1697 aa8.89□□□□□ -0.99
CPSF6-202ENST00000435070 GORABQ5T7V8 394 aa8.89□□□□□ -0.99
CPSF6-202ENST00000435070 CUL4AQ13619 759 aa8.89□□□□□ -0.99
CPSF6-202ENST00000435070 FILIP1Q7Z7B0 1213 aa8.89□□□□□ -0.99
CPSF6-202ENST00000435070 TCHHQ07283 1943 aa8.89□□□□□ -0.99
CPSF6-202ENST00000435070 TWISTNBQ3B726 338 aaPredicted RBP8.89□□□□□ -0.99
CPSF6-202ENST00000435070 EXOC6BQ9Y2D4 811 aa8.89□□□□□ -0.99
CPSF6-202ENST00000435070 CPA1P15085 419 aa8.89□□□□□ -0.99
CPSF6-202ENST00000435070 RAD51AP2Q09MP3 1159 aa8.89□□□□□ -0.99
CPSF6-202ENST00000435070 ZSCAN25Q6NSZ9 544 aa8.89□□□□□ -0.99
CPSF6-202ENST00000435070 MCM2P49736 904 aa8.89□□□□□ -0.99
CPSF6-202ENST00000435070 MEX3CQ5U5Q3 659 aaKnown RBP8.89□□□□□ -0.99
CPSF6-202ENST00000435070 OS9Q13438 667 aaPredicted RBP8.88□□□□□ -0.99
CPSF6-202ENST00000435070 SYT1P21579 422 aa8.88□□□□□ -0.99
CPSF6-202ENST00000435070 C8orf58Q8NAV2 365 aa8.88□□□□□ -0.99
CPSF6-202ENST00000435070 MAP4K4O95819 1239 aaPredicted RBP8.88□□□□□ -0.99
CPSF6-202ENST00000435070 ZSCAN22P10073 491 aaPredicted RBP8.88□□□□□ -0.99
CPSF6-202ENST00000435070 SLC4A10Q6U841 1118 aa8.88□□□□□ -0.99
CPSF6-202ENST00000435070 PAXBP1Q9Y5B6 917 aa8.88□□□□□ -0.99
CPSF6-202ENST00000435070 DCTN1Q14203 1278 aa8.88□□□□□ -0.99
CPSF6-202ENST00000435070 PTPN14Q15678 1187 aa8.88□□□□□ -0.99
CPSF6-202ENST00000435070 FBXW7Q969H0 707 aa8.88□□□□□ -0.99
CPSF6-202ENST00000435070 SMC3Q9UQE7 1217 aa8.88□□□□□ -0.99
CPSF6-202ENST00000435070 CROCC2H7BZ55 1655 aa8.88□□□□□ -0.99
CPSF6-202ENST00000435070 ZNF518AQ6AHZ1 1483 aa8.88□□□□□ -0.99
CPSF6-202ENST00000435070 TRIM66O15016 1216 aa8.88□□□□□ -0.99
CPSF6-202ENST00000435070 STX6O43752 255 aa8.88□□□□□ -0.99
CPSF6-202ENST00000435070 ERCC6LQ2NKX8 1250 aa8.88□□□□□ -0.99
CPSF6-202ENST00000435070 ANO6Q4KMQ2 910 aa8.88□□□□□ -0.99
CPSF6-202ENST00000435070 TOMM22Q9NS69 142 aa8.88□□□□□ -0.99
CPSF6-202ENST00000435070 CLIP2Q9UDT6 1046 aa8.88□□□□□ -0.99
CPSF6-202ENST00000435070 DIAPH1O60610 1272 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms