RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 TMEM63CQ9P1W3 806 aa12.91□□□□□ -0.34
SCAF4-203ENST00000434667 ITSN1Q15811 1721 aa12.91□□□□□ -0.34
SCAF4-203ENST00000434667 A0A1W2PP64 1363 aa12.91□□□□□ -0.34
SCAF4-203ENST00000434667 KLHL40Q2TBA0 621 aa12.91□□□□□ -0.34
SCAF4-203ENST00000434667 SKOR2Q2VWA4 1001 aaPredicted RBP12.91□□□□□ -0.34
SCAF4-203ENST00000434667 ZDHHC9Q9Y397 364 aa12.91□□□□□ -0.34
SCAF4-203ENST00000434667 ABCC11Q96J66 1382 aa12.9□□□□□ -0.34
SCAF4-203ENST00000434667 OFD1O75665 1012 aa12.9□□□□□ -0.34
SCAF4-203ENST00000434667 VAMP4O75379 141 aa12.9□□□□□ -0.34
SCAF4-203ENST00000434667 PLEKHM2Q8IWE5 1019 aa12.9□□□□□ -0.34
SCAF4-203ENST00000434667 LARP6Q9BRS8 491 aaKnown RBP12.9□□□□□ -0.34
SCAF4-203ENST00000434667 MAP2P11137 1827 aaKnown RBP12.9□□□□□ -0.34
SCAF4-203ENST00000434667 PPP1R9BQ96SB3 815 aa12.9□□□□□ -0.34
SCAF4-203ENST00000434667 CIZ1Q9ULV3 898 aaPredicted RBP12.89□□□□□ -0.35
SCAF4-203ENST00000434667 NSD2O96028 1365 aa12.89□□□□□ -0.35
SCAF4-203ENST00000434667 KIF16BQ96L93 1317 aa12.89□□□□□ -0.35
SCAF4-203ENST00000434667 TPM2P07951 284 aa12.89□□□□□ -0.35
SCAF4-203ENST00000434667 PDCL3Q9H2J4 239 aa12.89□□□□□ -0.35
SCAF4-203ENST00000434667 EMILIN1Q9Y6C2 1016 aa12.89□□□□□ -0.35
SCAF4-203ENST00000434667 EVC2Q86UK5 1308 aa12.89□□□□□ -0.35
SCAF4-203ENST00000434667 CDC45O75419 566 aa12.89□□□□□ -0.35
SCAF4-203ENST00000434667 MRPL50Q8N5N7 158 aaKnown RBP12.89□□□□□ -0.35
SCAF4-203ENST00000434667 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.89□□□□□ -0.35
SCAF4-203ENST00000434667 MBIPQ9NS73 344 aa12.88□□□□□ -0.35
SCAF4-203ENST00000434667 CABP1Q9NZU7 370 aa12.88□□□□□ -0.35
SCAF4-203ENST00000434667 ZHX1Q9UKY1 873 aaPredicted RBP12.88□□□□□ -0.35
SCAF4-203ENST00000434667 A2ML1A8K2U0 1454 aa12.88□□□□□ -0.35
SCAF4-203ENST00000434667 PEAK1Q9H792 1746 aa12.88□□□□□ -0.35
SCAF4-203ENST00000434667 SOX12O15370 315 aa12.87□□□□□ -0.35
SCAF4-203ENST00000434667 MIS18AQ9NYP9 233 aa12.87□□□□□ -0.35
SCAF4-203ENST00000434667 ANKRD36BQ8N2N9 1353 aa12.87□□□□□ -0.35
SCAF4-203ENST00000434667 SDSP20132 328 aa12.87□□□□□ -0.35
SCAF4-203ENST00000434667 PRAM1Q96QH2 718 aa12.87□□□□□ -0.35
SCAF4-203ENST00000434667 PODXL2Q9NZ53 605 aa12.87□□□□□ -0.35
SCAF4-203ENST00000434667 NCKAP5LQ9HCH0 1330 aa12.87□□□□□ -0.35
SCAF4-203ENST00000434667 YTHDC2Q9H6S0 1430 aaKnown RBP12.86□□□□□ -0.35
SCAF4-203ENST00000434667 TWISTNBQ3B726 338 aaPredicted RBP12.86□□□□□ -0.35
SCAF4-203ENST00000434667 USP26Q9BXU7 913 aa12.86□□□□□ -0.35
SCAF4-203ENST00000434667 RRS1Q15050 365 aaKnown RBP12.86□□□□□ -0.35
SCAF4-203ENST00000434667 PLPPR3Q6T4P5 718 aa12.86□□□□□ -0.35
SCAF4-203ENST00000434667 XRN1Q8IZH2 1706 aaKnown RBP12.86□□□□□ -0.35
SCAF4-203ENST00000434667 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.85□□□□□ -0.35
SCAF4-203ENST00000434667 ATP7BP35670 1465 aa12.85□□□□□ -0.35
SCAF4-203ENST00000434667 PHRF1Q9P1Y6 1649 aaKnown RBP12.84□□□□□ -0.35
SCAF4-203ENST00000434667 GCC1Q96CN9 775 aa12.84□□□□□ -0.35
SCAF4-203ENST00000434667 UPF3BQ9BZI7 483 aaKnown RBP12.84□□□□□ -0.35
SCAF4-203ENST00000434667 GADD45BO75293 160 aaPredicted RBP12.84□□□□□ -0.35
SCAF4-203ENST00000434667 NEK4P51957 841 aa12.84□□□□□ -0.35
SCAF4-203ENST00000434667 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.84□□□□□ -0.35
SCAF4-203ENST00000434667 ISY1Q9ULR0 285 aaKnown RBP12.84□□□□□ -0.35
SCAF4-203ENST00000434667 CPSF1Q10570 1443 aaKnown RBP12.84□□□□□ -0.35
SCAF4-203ENST00000434667 SLC4A10Q6U841 1118 aa12.83□□□□□ -0.36
SCAF4-203ENST00000434667 TTC22Q5TAA0 569 aa12.83□□□□□ -0.36
SCAF4-203ENST00000434667 WAPLQ7Z5K2 1190 aa12.83□□□□□ -0.36
SCAF4-203ENST00000434667 F6X3S4 739 aa12.83□□□□□ -0.36
SCAF4-203ENST00000434667 NECTIN2Q92692 538 aa12.83□□□□□ -0.36
SCAF4-203ENST00000434667 MEIS3Q99687 375 aa12.83□□□□□ -0.36
SCAF4-203ENST00000434667 PALD1Q9ULE6 856 aa12.83□□□□□ -0.36
SCAF4-203ENST00000434667 NOL7Q9UMY1 257 aaKnown RBP12.82□□□□□ -0.36
SCAF4-203ENST00000434667 IGSF3O75054 1194 aa12.82□□□□□ -0.36
SCAF4-203ENST00000434667 CT47B1P0C2W7 299 aaPredicted RBP12.82□□□□□ -0.36
SCAF4-203ENST00000434667 ZNF445P59923 1031 aa12.82□□□□□ -0.36
SCAF4-203ENST00000434667 POLKQ9UBT6 870 aa12.82□□□□□ -0.36
SCAF4-203ENST00000434667 RABEP1Q15276 862 aa12.81□□□□□ -0.36
SCAF4-203ENST00000434667 TTC12Q9H892 705 aaPredicted RBP12.81□□□□□ -0.36
SCAF4-203ENST00000434667 NUTM2FA1L443 756 aa12.81□□□□□ -0.36
SCAF4-203ENST00000434667 MCM10Q7L590 875 aa12.81□□□□□ -0.36
SCAF4-203ENST00000434667 EXOC6BQ9Y2D4 811 aa12.81□□□□□ -0.36
SCAF4-203ENST00000434667 MAP4K4O95819 1239 aaPredicted RBP12.81□□□□□ -0.36
SCAF4-203ENST00000434667 CYP2E1P05181 493 aaPredicted RBP12.81□□□□□ -0.36
SCAF4-203ENST00000434667 AEBP1Q8IUX7 1158 aa12.81□□□□□ -0.36
SCAF4-203ENST00000434667 PRDM4Q9UKN5 801 aa12.81□□□□□ -0.36
SCAF4-203ENST00000434667 ALDH1L2Q3SY69 923 aa12.8□□□□□ -0.36
SCAF4-203ENST00000434667 NME9Q86XW9 330 aa12.8□□□□□ -0.36
SCAF4-203ENST00000434667 ZKSCAN5Q9Y2L8 839 aa12.8□□□□□ -0.36
SCAF4-203ENST00000434667 CDK19Q9BWU1 502 aa12.8□□□□□ -0.36
SCAF4-203ENST00000434667 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.8□□□□□ -0.362e-6■■□□□ 14.1
SCAF4-203ENST00000434667 NUCB2P80303 420 aa12.79□□□□□ -0.36
SCAF4-203ENST00000434667 IDI1Q13907 227 aa12.79□□□□□ -0.36
SCAF4-203ENST00000434667 USP25Q9UHP3 1055 aa12.79□□□□□ -0.36
SCAF4-203ENST00000434667 NFE2L2Q16236 605 aa12.79□□□□□ -0.36
SCAF4-203ENST00000434667 RILPL2Q969X0 211 aa12.79□□□□□ -0.36
SCAF4-203ENST00000434667 ZNF428Q96B54 188 aa12.79□□□□□ -0.36
SCAF4-203ENST00000434667 TMX3Q96JJ7 454 aa12.79□□□□□ -0.36
SCAF4-203ENST00000434667 CHMP3Q9Y3E7 222 aa12.79□□□□□ -0.36
SCAF4-203ENST00000434667 RAPGEF3O95398 923 aa12.78□□□□□ -0.36
SCAF4-203ENST00000434667 CBX1P83916 185 aa12.78□□□□□ -0.36
SCAF4-203ENST00000434667 LRSAM1Q6UWE0 723 aa12.78□□□□□ -0.36
SCAF4-203ENST00000434667 DDX54Q8TDD1 881 aaKnown RBP12.78□□□□□ -0.36
SCAF4-203ENST00000434667 PDLIM2Q96JY6 352 aa12.78□□□□□ -0.36
SCAF4-203ENST00000434667 DIP2AQ14689 1571 aa12.78□□□□□ -0.36
SCAF4-203ENST00000434667 INTS3Q68E01 1043 aaKnown RBP12.78□□□□□ -0.36
SCAF4-203ENST00000434667 DCTPP1Q9H773 170 aa12.78□□□□□ -0.36
SCAF4-203ENST00000434667 CAMTA1Q9Y6Y1 1673 aa12.78□□□□□ -0.36
SCAF4-203ENST00000434667 ST18O60284 1047 aa12.77□□□□□ -0.37
SCAF4-203ENST00000434667 IL25Q9H293 177 aa12.77□□□□□ -0.37
SCAF4-203ENST00000434667 TERF2IPQ9NYB0 399 aa12.77□□□□□ -0.37
SCAF4-203ENST00000434667 FAM135BQ49AJ0 1406 aa12.77□□□□□ -0.37
SCAF4-203ENST00000434667 FCHSD2O94868 740 aa12.77□□□□□ -0.37
SCAF4-203ENST00000434667 G2E3Q7L622 706 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms