RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 PAPPAQ13219 1627 aa21.29■■□□□ 1
RPL28-204ENST00000431533 HOXC9P31274 260 aa21.28■■□□□ 1
RPL28-204ENST00000431533 ZNF827Q17R98 1081 aa21.28■■□□□ 1
RPL28-204ENST00000431533 ZCRB1Q8TBF4 217 aaKnown RBP21.28■■□□□ 1
RPL28-204ENST00000431533 LRRC4BQ9NT99 713 aa21.28■■□□□ 1
RPL28-204ENST00000431533 AKT1S1Q96B36 256 aa21.27■■□□□ 1
RPL28-204ENST00000431533 GGNBP2Q9H3C7 697 aa21.27■■□□□ 1
RPL28-204ENST00000431533 TFCP2L1Q9NZI6 479 aa21.27■■□□□ 1
RPL28-204ENST00000431533 CGNL1Q0VF96 1302 aa21.27■□□□□ 0.99
RPL28-204ENST00000431533 MAP3K19Q56UN5 1328 aa21.27■□□□□ 0.99
RPL28-204ENST00000431533 ZNF784Q8NCA9 323 aaPredicted RBP21.26■□□□□ 0.99
RPL28-204ENST00000431533 RTL1A6NKG5 1358 aa21.25■□□□□ 0.99
RPL28-204ENST00000431533 PRIM1P49642 420 aaKnown RBP21.25■□□□□ 0.99
RPL28-204ENST00000431533 GPR162Q16538 588 aa21.25■□□□□ 0.99
RPL28-204ENST00000431533 CHD4Q14839 1912 aa21.24■□□□□ 0.99
RPL28-204ENST00000431533 SMG6Q86US8 1419 aaKnown RBP21.24■□□□□ 0.99
RPL28-204ENST00000431533 NSD3Q9BZ95 1437 aa21.24■□□□□ 0.99
RPL28-204ENST00000431533 FBLN1P23142 703 aa21.24■□□□□ 0.99
RPL28-204ENST00000431533 KLHL34Q8N239 644 aa21.23■□□□□ 0.99
RPL28-204ENST00000431533 QSER1Q2KHR3 1735 aa21.22■□□□□ 0.99
RPL28-204ENST00000431533 FYB1O15117 783 aa21.22■□□□□ 0.99
RPL28-204ENST00000431533 RAPGEF4Q8WZA2 1011 aa21.22■□□□□ 0.99
RPL28-204ENST00000431533 CARD14Q9BXL6 1004 aa21.21■□□□□ 0.99
RPL28-204ENST00000431533 PNPLA7Q6ZV29 1317 aa21.21■□□□□ 0.99
RPL28-204ENST00000431533 CCNL1Q9UK58 526 aaPredicted RBP21.2■□□□□ 0.98
RPL28-204ENST00000431533 TATP17735 454 aaPredicted RBP21.19■□□□□ 0.98
RPL28-204ENST00000431533 RRS1Q15050 365 aaKnown RBP21.18■□□□□ 0.98
RPL28-204ENST00000431533 MSH5O43196 834 aa21.17■□□□□ 0.98
RPL28-204ENST00000431533 DOT1LQ8TEK3 1739 aa21.16■□□□□ 0.98
RPL28-204ENST00000431533 KIF24Q5T7B8 1368 aa21.16■□□□□ 0.98
RPL28-204ENST00000431533 NBPF6Q5VWK0 638 aa21.16■□□□□ 0.98
RPL28-204ENST00000431533 PELP1Q8IZL8 1130 aaKnown RBP21.16■□□□□ 0.98
RPL28-204ENST00000431533 NBPF4Q96M43 638 aa21.16■□□□□ 0.98
RPL28-204ENST00000431533 RGPD2P0DJD1 1756 aa21.15■□□□□ 0.98
RPL28-204ENST00000431533 LY75O60449 1722 aa21.15■□□□□ 0.98
RPL28-204ENST00000431533 MEGF6O75095 1541 aa21.15■□□□□ 0.98
RPL28-204ENST00000431533 PCDH11XQ9BZA7 1347 aa21.15■□□□□ 0.98
RPL28-204ENST00000431533 PCDH11YQ9BZA8 1340 aa21.15■□□□□ 0.98
RPL28-204ENST00000431533 FLAD1Q8NFF5 587 aa21.15■□□□□ 0.98
RPL28-204ENST00000431533 NSD2O96028 1365 aa21.14■□□□□ 0.98
RPL28-204ENST00000431533 GRIN3BO60391 1043 aa21.14■□□□□ 0.97
RPL28-204ENST00000431533 KCNQ4P56696 695 aa21.14■□□□□ 0.97
RPL28-204ENST00000431533 INSRP06213 1382 aa21.13■□□□□ 0.97
RPL28-204ENST00000431533 FLT4P35916 1363 aa21.12■□□□□ 0.97
RPL28-204ENST00000431533 COL24A1Q17RW2 1714 aa21.12■□□□□ 0.97
RPL28-204ENST00000431533 C1QTNF8P60827 252 aa21.11■□□□□ 0.97
RPL28-204ENST00000431533 USHBP1Q8N6Y0 703 aa21.11■□□□□ 0.97
RPL28-204ENST00000431533 ANKRD26Q9UPS8 1709 aa21.1■□□□□ 0.97
RPL28-204ENST00000431533 SMARCC1Q92922 1105 aaPredicted RBP21.1■□□□□ 0.97
RPL28-204ENST00000431533 PANK3Q9H999 370 aa21.1■□□□□ 0.97
RPL28-204ENST00000431533 SHANK3Q9BYB0 1731 aa21.09■□□□□ 0.97
RPL28-204ENST00000431533 HSP90AB2PQ58FF8 381 aa21.09■□□□□ 0.97
RPL28-204ENST00000431533 COL23A1Q86Y22 540 aaPredicted RBP21.09■□□□□ 0.97
RPL28-204ENST00000431533 SENP3-EIF4A1A0A087X0R7 540 aa21.08■□□□□ 0.97
RPL28-204ENST00000431533 TUBGCP6Q96RT7 1819 aa21.07■□□□□ 0.96
RPL28-204ENST00000431533 PPM1GO15355 546 aaPredicted RBP21.07■□□□□ 0.96
RPL28-204ENST00000431533 GIGYF1O75420 1035 aaPredicted RBP21.07■□□□□ 0.96
RPL28-204ENST00000431533 MPRIPQ6WCQ1 1025 aa21.07■□□□□ 0.96
RPL28-204ENST00000431533 EMILIN1Q9Y6C2 1016 aa21.07■□□□□ 0.96
RPL28-204ENST00000431533 MAP2P11137 1827 aaKnown RBP21.06■□□□□ 0.96
RPL28-204ENST00000431533 TNNT2P45379 298 aaPredicted RBP21.06■□□□□ 0.96
RPL28-204ENST00000431533 NLGN2Q8NFZ4 835 aa21.06■□□□□ 0.96
RPL28-204ENST00000431533 PALLDQ8WX93 1383 aa21.06■□□□□ 0.96
RPL28-204ENST00000431533 SPG7Q9UQ90 795 aa21.05■□□□□ 0.96
RPL28-204ENST00000431533 CD2APQ9Y5K6 639 aa21.05■□□□□ 0.96
RPL28-204ENST00000431533 KIF7Q2M1P5 1343 aa21.04■□□□□ 0.96
RPL28-204ENST00000431533 AK7Q96M32 723 aa21.03■□□□□ 0.96
RPL28-204ENST00000431533 MSL1Q68DK7 614 aa21.02■□□□□ 0.96
RPL28-204ENST00000431533 C5P01031 1676 aa21.02■□□□□ 0.95
RPL28-204ENST00000431533 CYP27B1O15528 508 aa21.01■□□□□ 0.95
RPL28-204ENST00000431533 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21■□□□□ 0.95
RPL28-204ENST00000431533 NKX1-1Q15270 411 aaPredicted RBP20.99■□□□□ 0.95
RPL28-204ENST00000431533 YBX3P16989 372 aaKnown RBP eCLIP20.98■□□□□ 0.95
RPL28-204ENST00000431533 KNSTRNQ9Y448 316 aa20.98■□□□□ 0.95
RPL28-204ENST00000431533 WASHC2AQ641Q2 1341 aa20.98■□□□□ 0.95
RPL28-204ENST00000431533 UTRNP46939 3433 aa20.97■□□□□ 0.95
RPL28-204ENST00000431533 TMOD3Q9NYL9 352 aa20.97■□□□□ 0.95
RPL28-204ENST00000431533 POLKQ9UBT6 870 aa20.97■□□□□ 0.95
RPL28-204ENST00000431533 MORC1Q86VD1 984 aa20.96■□□□□ 0.95
RPL28-204ENST00000431533 IFNL2Q8IZJ0 200 aa20.96■□□□□ 0.95
RPL28-204ENST00000431533 PIGBQ92521 554 aa20.96■□□□□ 0.95
RPL28-204ENST00000431533 TAF1LQ8IZX4 1826 aa20.96■□□□□ 0.95
RPL28-204ENST00000431533 SSFA2P28290 1259 aa20.95■□□□□ 0.94
RPL28-204ENST00000431533 C4BP0C0L5 1744 aa20.95■□□□□ 0.94
RPL28-204ENST00000431533 PKD1L3Q7Z443 1732 aa20.95■□□□□ 0.94
RPL28-204ENST00000431533 LOC102724428A0A0B4J2F2 783 aa20.94■□□□□ 0.94
RPL28-204ENST00000431533 SIK1P57059 783 aa20.94■□□□□ 0.94
RPL28-204ENST00000431533 ITGB4P16144 1822 aa20.94■□□□□ 0.94
RPL28-204ENST00000431533 NCAPD2Q15021 1401 aa20.94■□□□□ 0.94
RPL28-204ENST00000431533 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.93■□□□□ 0.94
RPL28-204ENST00000431533 PHF14O94880 888 aa20.93■□□□□ 0.94
RPL28-204ENST00000431533 PLEKHG2Q9H7P9 1386 aa20.93■□□□□ 0.94
RPL28-204ENST00000431533 EYA1Q99502 592 aa20.92■□□□□ 0.94
RPL28-204ENST00000431533 ATP6V1AP38606 617 aa20.91■□□□□ 0.94
RPL28-204ENST00000431533 CNGB1Q14028 1251 aaPredicted RBP20.91■□□□□ 0.94
RPL28-204ENST00000431533 GPBP1L1Q9HC44 474 aaPredicted RBP20.91■□□□□ 0.94
RPL28-204ENST00000431533 TOGARAM1Q9Y4F4 1720 aa20.9■□□□□ 0.94
RPL28-204ENST00000431533 HSP90AB1P08238 724 aaKnown RBP20.89■□□□□ 0.93
RPL28-204ENST00000431533 PHKG2P15735 406 aa20.89■□□□□ 0.93
RPL28-204ENST00000431533 EIF4A2Q14240 407 aaKnown RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms